bio exam Flashcards

1
Q

What is interphase? What main events take place here as the cell is waiting to begin division?

A

Cell carries out its normal functions, grows, and makes copies of its genetic material in preparation for the next stage of the cycle

Divided into three phases. The length of these phases varies depending on the species and type of cell

G1- cell is getting bigger but will approach maximum size in order to support the transportations of chemicals and proteins, this is when the cell makes proteins needed for replication
is the cell large enough? does it have enough energy?

S- DNA is doubled before entering mitosis where it will be split in half
proper proteins (CDKs) signal division

G2- microtubules are used to move proteins, vesicles, mitochondria, chromosomes, etc. around the cell in preparation for mitosis
has everything been replicated without mistakes or damage?

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2
Q

Distinguish between the different phases of meiosis (including diagrams)

A

Miosis
- produces 4 cells from one parent cell, and each cell has 23 chromosomes
- requires two parents to produce genetically distinct offspring (exception: identical twins).
- It involves the fusion of a male sperm reproductive cell (sperm) and a female reproductive cell (egg).
- These gametes fuse and become a zygote in a process called fertilization.
- Cells from one parent are referred to as haploids because they contain a single set of chromosomes.
- Once the gametes are fertilized, they become diploid because they now contain a full set of chromosomes from both parents, this is called a zygote.
- haploid gametes are important to keep the chromosome number from doubling in each future generation. they are produced by a process called miosis, which only occurs in the reproductive organs (ovaries and testes)
- In miosis, DNA replicates once but nucleus divides twice

Prophase I
- Chromosomes are formed and condensed and line up beside each other (synapsis)
- Here the homologous chromosomes participate in crossing over where they exchange genetic information
This provides genetic diversity

Metaphase I
- Chromosomes align in pairs at the centre of the cell

Anaphase I
- Chromosome pairs separate to opposite ends of the cell with sister
chromatids remaining together
- Note: a chromosome from the mom went one way, and a chromosome from the dad went another way
- This allows for a mix on either side which is called independent assortment, leading to genetic diversity
- The number of chromosomes is reduced from diploid (2n) to haploid (n)
- The number of genetically distinct gametes that can be produced from a diploid cell is 2n
- n= the number of chromosome pairs
If humans have 23 chromosome pairs, there are 223 (~8 million) genetically distinct gametes that can be produced during meiosis!

Telophase I
- Two daughter cells are formed with
each daughter containing one chromosome of the pair (mom or dad)
- Chromosomes uncoil, spindle fibres disappear, nucleus reforms
- There are now two haploid daughter cells

Meiosis II
- The cells from Meiosis I are haploid as they do not have 2 copies of each chromosome.
- They remain haploid, but further separate to create four gametes

Prophase II
- Unlike Prophase I, crossing over does not occur here
- DNA does not replicate
- Chromosomes condense, and the nucleus disappears
- Centrosomes move to the opposite ends

Metaphase II
- Chromosomes line up at the centre of the cell
- Note: they are no longer in pairs
- Spindle fibres attach to centromeres

Anaphase II
- Spindle fibres pull chromosomes apart
- Sister chromatids move separately to each pole
- Independent assortment occurs again

Telophase II
-Chromosomes unwind
- Nucleus reforms
- Cytokinesis occurs producing 4 haploid daughter cells that are ready for fertilization!

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3
Q

How are haploid gametes created? What is formed through their fertilization?

A
  • Cells from one parent are referred to as haploids because they contain a single set of chromosomes.
  • Once the gametes are fertilized, they become diploid because they now contain a full set of chromosomes from both parents, this is called a zygote.
  • haploid gametes are important to keep the chromosome number from doubling in each future generation. they are produced by a process called miosis, which only occurs in the reproductive organs (ovaries and testes)
  • In miosis, DNA replicates once but nucleus divides twice
  • During meiosis I, homologous chromosomes (one from each parent) pair up and exchange genetic material through crossing over. They then separate, resulting in two daughter cells, each with a haploid set of chromosomes.
  • In meiosis II, the two daughter cells from meiosis I each divide again, similar to mitosis but without chromosome replication. This results in a total of four haploid gametes, each with a unique combination of genetic material.
  • The zygote, formed through the fusion of sperm and egg, is diploid. It contains a complete set of chromosomes (one set from each parent) and has the potential to develop into a new organism through cell division and differentiation.
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4
Q

What is the outcome of mitosis? What is the outcome of meiosis?

A

Mitosis
Mitosis is a type of cell division that occurs in somatic (non-reproductive) cells. The outcome of mitosis is the formation of two identical daughter cells, each with the same number of chromosomes as the parent cell. The key points about mitosis are:
Purpose: Growth, repair, and maintenance of multicellular organisms.
Number of Divisions: One division.
Number of Daughter Cells: Two.
Genetic Composition of Daughter Cells: Identical to the parent cell and to each other.
Chromosome Number: Diploid (same as the parent cell).
Genetic Recombination: No genetic recombination (except for rare mutation events).

Meiosis
Meiosis is a specialized type of cell division that occurs only in cells destined to become gametes (sperm and egg cells). The outcome of meiosis is the formation of four non-identical daughter cells, each with half the number of chromosomes of the parent cell. The key points about meiosis are:
Purpose: Production of gametes (sperm and egg cells) for sexual reproduction.
Number of Divisions: Two divisions (meiosis I and meiosis II).
Number of Daughter Cells: Four.
Genetic Composition of Daughter Cells: Each daughter cell is genetically unique due to crossing over (genetic recombination) during prophase I of meiosis.
Chromosome Number: Haploid (half the number of chromosomes as the parent cell).
Genetic Recombination: Occurs through crossing over during prophase I, leading to genetic diversity among gametes.

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4
Q

What is nondisjunction? How does this happen? What does it cause?

A

occurs when homologous chromosomes fail to separate during anaphase I or sister chromatids fail to separate during anaphase II. This can cause an extra chromosome (trisomy) or a missing chromosome (monosomy)

During meiosis I, homologous chromosomes (pairs of chromosomes) should separate, with one member of each pair going to each daughter cell. If nondisjunction occurs during meiosis I, both chromosomes of a homologous pair move to the same daughter cell, resulting in one cell receiving an extra chromosome and the other cell lacking that chromosome.

During meiosis II, sister chromatids should separate, with one chromatid going to each daughter cell. If nondisjunction occurs during meiosis II, both chromatids of a chromosome move to the same daughter cell, resulting in one cell having an extra chromosome and the other cell lacking that chromosome.

can cause Genetic Disorders: Aneuploidy resulting from nondisjunction can lead to genetic disorders and developmental abnormalities in offspring if an aneuploid gamete participates in fertilization.
Example: trisomy 21, which is known as down syndrome, causes facial characteristics, heart defects, susceptible to respiratory disease, Alzheimer’s, and intellectual disability

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4
Q

What are the products of oogenesis? What are the products of spermatogenesis?

A

oogenesis
- Meiosis takes place in the ovaries
- Begins with a diploid cell called an oogonium
- These cells reproduce by a combination of mitosis and meiosis but stop at Prophase I and wait their turn to continue since only one goes at a time
- Meiosis I only continues for one cell each month beginning at puberty
- When the cell divides it divides unevenly creating one polar body (cannot be fertilized) and one viable egg
- The viable egg will continue through Meiosis I and Meiosis II (pausing at Metaphase II), in preparation for fertilization
- If the viable egg is fertilized by a sperm, the cell can complete Meiosis II, producing a second polar body
- The haploid nucleus of the egg cell then fuses with the haploid nucleus of the sperm cell to complete fertilization and produce a diploid zygote
- production of eggs

Spermatogenesis
- Meiosis takes place in the testes
- Begins with a diploid cell called a spermatogonium
- These cells reproduce by a combination of mitosis and meiosis to create four mature sperm cells
- production of sperm

3 key differences:
(1) In oogenesis cytokinesis is unequal in daughter cells
- Ensures only one zygote forms during fertilization so that nutrients are not divided
(2) At birth the ovary contains all the cells it will ever have that will overtime develop into eggs, whereas sperm continuously
develop throughout the male’s reproductive years
(3) Oogenesis has a long resting period after prophase I until they are activated by hormones to continue the process

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5
Q

What is a nucleotide? How does a DNA and RNA nucleotide differ?

A
  • DNA consists of two molecules that are arranged into a ladder-like spiral shape structure called a double helix
  • A molecule of DNA is made up of millions of tiny subunits called nucleotides
  • Each nucleotide consists of three things:
    (1) Pentose sugar
    -5 carbon sugar
  • DNA has deoxyribose sugar
  • RNA has ribose sugar
    (2) Phosphate group
    -A phosphorus oxygen bond
  • Important because it links the sugar from one nucleotide to the phosphate of the next to connect many together
    (3) Nitrogenous base
  • There are 4 bases in DNA:
    ○ Thymine (T)
    ○ Adenine (A)
    ○ Cytosine (C)
    ○ Guanine (G)
  • There are 4 bases in RNA:
    ○ Uracil (U)
    ○ Adenine (A)
    ○ Cytosine (C)
    ○ Guanine (G)

complementary base pairs
A pairs with T → forms a base pair with 2 hydrogen bonds
C pairs with G → forms a base pair with 3 hydrogen bonds
Note: in RNA A pairs with U instead of T

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6
Q

Know the difference between the inheritance pattern of autosomal and sex-linked traits

A

Autosomal Traits:
Autosomal traits are determined by genes located on the autosomes (non-sex chromosomes). Humans have 22 pairs of autosomes and 1 pair of sex chromosomes (XX in females and XY in males). Here are key features of inheritance for autosomal traits:
- Dominant Autosomal Traits:
If an individual inherits at least one copy of the dominant allele (A), they will exhibit the trait.
- Recessive Autosomal Traits:
An individual must inherit two copies of the recessive allele (a) to exhibit the trait.
Inheritance Pattern:
- Autosomal traits follow Mendelian inheritance patterns (e.g., dominant-recessive, co-dominant, etc.).
They can affect both males and females equally because they are not linked to the sex chromosomes.

Sex-linked traits
Sex-linked traits are determined by genes located on the sex chromosomes (X and Y). Since females have two X chromosomes (XX) and males have one X and one Y chromosome (XY), the inheritance patterns for sex-linked traits differ between males and females:
- X-linked Recessive Traits:
These traits are carried on the X chromosome.
Males are more commonly affected because they have only one X chromosome. If a male inherits a recessive allele on the X chromosome from his mother, he will express the trait.
- X-linked Dominant Traits:
These traits are less common than X-linked recessive traits.
Both males and females can inherit and express the trait if they have at least one dominant allele.
- Y-linked Traits:
These traits are very rare and are inherited only through the Y chromosome.
They are passed down from father to son.
Example: Y-linked traits include male-specific traits like male infertility due to mutations on the Y chromosome.

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7
Q

Know how to perform autosomal and X-Linked monohybrid crosses.

A

A cross of two individuals that differ by one trait
Punnett Square: A 2 x 2 chart used to determine the probability of results when two individuals are crossed
P Generation: The parents in the initial cross
F1 Generation: The offspring of the first generation cross
F2 Generation: The offspring of the second generation cross

(1)The possible gametes produced by the parents are written at the top and along the side
(2) The gametes are combined to produce all of the possible F1 genotypes
(3) Genotype and Phenotype Ratios are expressed

  • When a cross involves parents that are homozygous for a trait, the F1 generation will always be heterozygous
  • The F2 generation will always have a genotypic ratio of 1:2:1 (1 homozygous dominant: 2 heterozygous: 1 homozygous recessive)
  • The F2 generation will always have a phenotypic ratio of 3:1 (3 dominant: 1 recessive)
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7
Q

Be able to complete a dihybrid cross for both the F1 and F2 generations.

A

Dihybrid cross
- Used to determine the inheritance pattern of two different traits
- Remember the Law of Independent Assortment: traits are on different chromosomes, therefore they are inherited separately
- This gives us 16 possible genotypes, and 4 possible phenotypes with each dihybrid cross!

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8
Q

What is artificial selection? What are some ways this process is used today?

A

Selective pressure exerted by humans on populations as way to improve or modify desirable traits
Examples:
● Cats or dogs bred for appearance
● Cows bred for more muscle for meat
● Chickens bred to produce more eggs

Artificial selection is used by farmers to:
1) Increase nutritional value
2) Increase production and the economy for countries dependent on crops
3) To be drought-resistant or pest-resistant

Consequences of AS
- Monoculture: only one crop is grown in the same space at the same time producing genetically identical plants. This will reduce genetic diversity
If a new disease infests the crops most of them will be affected
Positive Consequences
- Growing requirements
- Maintenance
- Pest control
- Standardized harvesting
- Greater yield
Negative Consequences
- Weak soil
- More fertilizer
- Spread of pests
- Spread of diseases
- More pesticides
Gene Banks contain seeds from early plant ancestors. These seeds can survive for long periods of time and can be introduced into modern plants if needed Goal: preserve genetic diversity

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8
Q

What is the difference between convergent and divergent evolution?

A

convergent evolution
similar traits arise because different species independently adapted to similar environmental conditions (example: birds and bats both have wings, but they don’t have a common ancestor)

Divergent evolution
species similar to the ancestral species diverge and become distinct due to changing environmental conditions (example: birds have a common ancestor but they have different types of beaks based on their diet)

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8
Q

What is the difference between homologous, analogous, and vestigial structures?

A

Homologous Structures
- Structures that have similar structural elements and origin
- May have a different function
- Originate from a common ancestor
○ Example: hair on mammals

Analogous Structures
- Structures that do not have a common evolutionary origin
- Perform similar functions
- Provide evidence for adaptations to suit the environment
○ Fins on a dolphin vs. fins on a fish

Vestigial structure
-reduces versions of what was once functional structures in an ancestral species

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8
Q

Know examples of incomplete and codominance

A

Incomplete dominance- MIX OF TWO COLORS
- Neither allele completely masks the other
- Both alleles are equally dominant, causing a completely new phenotype that looks like a blend of the other two
- Example: flower colour in snapdragon plant
- Snapdragon Flower Color:
In snapdragons, flower color shows incomplete dominance.
Red (RR) and white (WW) homozygous flowers produce pink (RW) heterozygous offspring.
- Andalusian Chickens:
Feather color in Andalusian chickens exhibits incomplete dominance.
Black (BB) and white (WW) homozygous chickens produce blue (BW) heterozygous offspring.

Codominance- TWO COLORS BESIDE EACH OTHER
- Both dominant alleles are equally expressed at the same time in a heterozygote
- Example: Hair colour in a roan cattle
ROAN: an animal that has a fur coat of
alternating hair colours expressed at the
same time!
- ABO Blood Group System:
The ABO blood group system in humans demonstrates codominance.
Individuals with genotype IAIB have both A and B antigens on their red blood cells, expressing both alleles equally.
- Roan Cattle Coat Color:
Coat color in roan cattle is an example of codominance.
Red (RR) and white (WW) homozygous cattle produce roan (RW) heterozygous offspring, which have both red and white hairs evenly distributed throughout their coat.

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8
Q

What is natural selection? What are the three types?

A

Natural selection only occurs when there is genetic diversity within a species
- If an organism produces offspring that also survive to reproduce, that organism is said to be fit for the environment
- Fitness: the contribution that an individual makes to the next generation by producing offspring that will survive long enough to reproduce
- High Fitness: many viable offspring
- Low Fitness: few viable offspring
- Natural selection is situational because it depends on the environment and available traits
- It does not anticipate the change in the environment and has no direction or purpose
- There are times when one trait may have no relevance for survival until a selective pressure turns that trait into a selective advantage

3 types:
-Stabilizing selection: favors intermediate phenotypes and acts against extreme variations of the phenotype
-Directional selection: favors phenotypes at one extreme over the other (especially in environmental change)
-Disruptive selection: favours the extremes of a range of phenotypes which can cause the intermediate to be eliminated

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9
Q

What are the possible genotypes and phenotypes associated with blood type? What kind of inheritance patterns are evident when looking at blood types?

A
  • One single gene determines a person’s blood type by coding for a type of antigen protein (molecule that stimulates the body’s immune system) to attach to the red blood cell membrane
  • The gene is designated, I and has three
    common alleles: IA , IB, i
  • Presence of allele A produces an A antigen
  • Presence of allele B produces a B antigen
  • Presence of both alleles A and B produce both antigens
  • Presence of allele i produces no antigen

Genotype IAIA or IAi: Blood type A (phenotype).
Genotype IBIB or IBi: Blood type B (phenotype).
Genotype IAIB: Blood type AB (phenotype).
Genotype ii: Blood type O (phenotype).

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9
Q

Be able to contrast the findings of Charles Darwin and Jean-Baptiste Lamarck.

A

Jean-baptiste Lamarck
- Suggested species increased complexity and became better adapted to their environment over time until they achieved perfection
- Proposed the idea of the inheritance of
acquired characteristics where characteristics acquired in an organism’s lifetime could be passed onto offspring
- He would explain a giraffe’s long neck by: Giraffes had to stretch their neck to
reach the top of trees (food)
- This learned characteristic was useful
and was passed onto future generations
- Use vs. Misuse (things that are used
will be passed on, things that are not
used will not be passed on)

Charles Darwin
- Travelled the coast of South America and made natural and geographical observations
- Proposed the Theory of Natural Selection→ life has changed and continues to change based on natural pressures
His observations:
1. Flora and fauna of the different regions were distinct from those in Europe
→ Rodents in South America (SA) were similar to each other but different from other continents
2. Fossils of extinct animals looked very similar to living animals
→ Extinct glyptodon and modern armadillo from SA
3. Finches and other animals Darwin saw on the Galapagos Islands closely resembled animals he had observed on the West Coast of South America
4. Galapagos species (tortoises and finches) looked identical at first but:
→Varied slightly between islands
→ Each appeared to be adapted to eating different types of foods (different beak size and shape)
5. Through his experience with artificial selection (breeding pigeons, studying dogs and flowers), he knew it was possible for traits to be passed down from parent to offspring.
- From here, using the idea of survival of the fittest he developed the theory of Natural Selection.
As written in his book The Origin of Species:
1) Organisms produce more offspring than are able to survive
2) Individuals of a population very extensively
3) Individuals better suited to local conditions survive and reproduce
4) Processes for change are slow and gradual
- Darwin never used the word evolution, he called it descent with modification
- To Darwin evolution meant progress
- Natural Selection does not demonstrate progress; it has no set direction

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10
Q

Know the sources of evidence for evolution and examples of each.

A

the fossil record
-Specific fossils are found within specific layers
-(strata) of sedimentary rock
-Paleontologists use this to determine dates
- Not all organisms appear in the fossil record at the same time
- Transitional fossils are always being researched and found to fill in the space between the past and the present, where some organisms developed differently.

biogeography
- The study of the geographical distribution of species
- Geographically close environments are more likely to have related species
- Animals found on islands closely resemble animals on the nearest continent
- Fossils of the same species can be found on the coastline of neighboring continents

anatomy
Homologous Structures
- Structures that have similar structural elements and origin
- May have a different function
- Originate from a common ancestor
○ Example: hair on mammals

Analogous Structures
- Structures that do not have a common evolutionary origin
- Perform similar functions
- Provide evidence for adaptations to suit the environment
○ Fins on a dolphin vs. fins on a fish

Embryology
-The study of prebirth stages of an organism’s development
-This helps us to see evolutionary ancestors between organisms

DNA
- comparing genetic sequences can help determine similarity
- Two organisms with similar DNA suggests that they inherited these traits from a common ancestor

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10
Q

What organs are considered accessory to the digestive system? What are their functions?

A

The Pancreas
* Pancreatic fluid contains enzymes to help with digestion, and bicarbonate (a base) to neutralize stomach acid by raising its pH
* The pH level of the small intestine needs to be between 6 and 7 for enzymes to work fast and efficiently
* The pancreas also regulates blood sugar by releasing hormones (ie. insulin)

The Liver
* Produces bile and bile salts which are stored in the gallbladder
○ Bile is used to emulsify (break down) fats in the small intestines
○ This increases the surface area for chemical digestion

Gallbladder
Function: The gallbladder is a small sac-like organ located beneath the liver.
Role in Digestion:
-Stores and concentrates bile produced by the liver.
-Releases bile into the small intestine (duodenum) in response to the presence of fatty foods, aiding in the digestion and absorption of fats.

10
Q

What is the difference between allopatric and sympatric speciation?

A

Allopatric speciation
population are separated by a geographical barrier. gene flow is interrupted

Sympatric speciation
populations in the same geographical area become reproductively isolated (common in plants since they can’t move)

11
Q

What are the four stages of digestion? Which major organs are involved in these stages?

A

1) Ingestion: food is taken into the body
Major Organs: Mouth and Salivary Glands (submandibular, sublingual, parotid)
Function: Ingestion begins with the intake of food through the mouth. Teeth break down food into smaller pieces (mechanical digestion), and saliva from the salivary glands (containing enzymes like amylase) starts the chemical breakdown of carbohydrates.

2) Digestion: involves both physical and chemical breakdown of food into smaller molecules
Major Organs: Stomach, small intestines and mouth
Function:
a. Mechanical Digestion: In the stomach, food is further broken down by muscular contractions (churning) and mixing with gastric juices.
b. Chemical Digestion: Gastric glands in the stomach secrete hydrochloric acid and pepsinogen, which together form pepsin to break down proteins. The stomach also releases gastric lipase to digest fats.
c. Small Intestine: Enzymes from the pancreas (e.g., pancreatic amylase, lipase, proteases) and bile from the liver (stored in the gallbladder) further break down carbohydrates, fats, and proteins. Villi and microvilli in the small intestine absorb nutrients into the bloodstream.

3) Absorption: molecules are transported to the circulatory system, which delivers the nutrients to the body cells
Major Organs: Small Intestine (mainly) and Large Intestine
Function: Nutrients (such as glucose, amino acids, fatty acids, vitamins, and minerals) are absorbed through the walls of the small intestine into the bloodstream. Water and electrolytes are also absorbed, and remaining indigestible food (fiber) passes into the large intestine.

4) Elimination: undigested solid waste matter is removed from the body
Major Organs: Rectum
Function: The large intestine absorbs water and salts from the material that remains after digestion and absorption. It forms feces, which are stored in the rectum until they are eliminated from the body through the anus during defecation.

11
Q

What are the factors of microevolution? Know an example for each.

A

Microevolution: The change in % of frequency of alleles within a population. Can lead to evolution

mutation - change in the DNA of one individual. A heritable mutation (gamete) may affect an entire gene pool

gene flow (migration) - the net movement of alleles from one population to another due to the migration of individuals

Non-random mating - mating among individuals on the basis of a particular phenotype. Inbreeding is another example

Genetic drift - The change of frequencies in alleles due to chance events in a population.

natural selection (most significant) - selective forces affect populations. Theres 4 types of natural selection (stabilizing, directional, disruptive, sex)

More genetic variation in a population = greater diversity = greater chance of selective advantage in a changing environment

11
Q

Know the difference between mechanical and chemical digestion. Where does each occur?

A

Mechanical digestion involves the physical breakdown of food into smaller pieces without changing its chemical composition. This process increases the surface area of food, making it easier for enzymes to digest.
Major Organs Involved:
Mouth: Teeth chew and grind food into smaller pieces. Saliva moistens the food and contains enzymes (e.g., amylase) that start the breakdown of carbohydrates.
Stomach: The stomach performs mechanical digestion through muscular contractions (peristalsis) and mixing movements. These actions churn and mix food with gastric juices, breaking it down into a semi-liquid substance called chyme.

Chemical digestion involves the breakdown of large food molecules into smaller molecules by enzymes and other chemicals. These smaller molecules are then absorbed into the bloodstream and used by cells for energy, growth, and repair.
Major Organs Involved:
Mouth: Saliva contains enzymes such as amylase, which begins the digestion of carbohydrates into smaller sugars like maltose.
Stomach: Gastric glands secrete hydrochloric acid and pepsinogen, which together form pepsin. Pepsin breaks down proteins into smaller peptides.
Small Intestine: Enzymes from the pancreas (e.g., pancreatic amylase, lipase, proteases) and bile from the liver (stored in the gallbladder) further break down carbohydrates, fats, and proteins into their component molecules (e.g., glucose, fatty acids, amino acids).
Purpose: Chemical digestion breaks down food molecules into forms that can be absorbed through the intestinal lining into the bloodstream. These nutrients are then transported to cells throughout the body for energy production, growth, and repair.

12
Q

How does the small intestine work to absorb nutrients into the bloodstream?

A

Small Intestine
- Functions to complete chemical digestion of macromolecules and absorb their monomers
○ This is done with the help of enzymes found in the cells lining the small intestine and pancreas
- The small intestine walls contain folds covered with villi and microvilli (containing capillaries) that increase surface area for nutrients to be absorbed
duodenum, jejunum, ileum

12
Q

What secretions and enzymes are produced by the human body to aid in digestion?

A
  1. Mouth
    Saliva:
    - Function: Saliva moistens food, lubricates the mouth and throat, and contains enzymes that initiate the breakdown of carbohydrates.
    - Enzyme: Amylase (salivary amylase) begins the digestion of starches (complex carbohydrates) into smaller sugars like maltose.
  2. Stomach
    Gastric Juice:
    - Function: Gastric juice is a mixture of hydrochloric acid and enzymes that help break down food and kill bacteria.
    - Enzymes:
    Pepsin: Breaks down proteins into smaller peptides.
    Gastric lipase: Begins the digestion of fats.
  3. Pancreas
    Pancreatic Juice:
    - Function: Pancreatic juice neutralizes the acidic chyme from the stomach and provides enzymes that further break down carbohydrates, fats, and proteins in the small intestine.
    - Enzymes:
    Pancreatic amylase: Continues the breakdown of carbohydrates (starches) into smaller sugars.
    Pancreatic lipase: Digests fats (triglycerides) into fatty acids and glycerol.
    Proteases (trypsin, chymotrypsin, carboxypeptidase): Break down proteins into smaller peptides and amino acids.
  4. Liver
    Bile:
    - Function: Bile is produced by the liver and stored in the gallbladder. It aids in the digestion and absorption of fats by emulsifying large fat globules into smaller droplets, which enhances the action of lipase enzymes.
    - Components: Bile salts, bile pigments, cholesterol, and phospholipids.
  5. Small Intestine
    Intestinal Juice:
    - Function: Intestinal juice contains enzymes and mucus to facilitate the final stages of digestion and absorption of nutrients.
    - Enzymes:
    Peptidases: Break down peptides (small proteins) into amino acids.
    Maltase, sucrase, lactase: Break down disaccharides (maltose, sucrose, lactose) into monosaccharides (glucose, fructose, galactose).
13
Q

Know the four major macromolecules, examples of each, and their monomers.

A

Macromolecules have to be broken down into their simplest form (monomers)

Carbohydrates → Monosaccharides
- Get absorbed into the circulatory system and transported to the liver to be converted into glucose
- Glucose is transported to body cells for energy
- Liver converts extra glucose into glycogen
- Glycogen provides energy when blood glucose levels decrease
- Function: Provide energy and structural support in cells.
- Examples: Glucose, sucrose, starch, cellulose, glycogen.
- Monosaccharides: Glucose, fructose, galactose.
- Disaccharides: Sucrose (glucose + fructose), lactose (glucose + galactose).
- Polysaccharides: Starch (plants store glucose), glycogen (animals store glucose), cellulose (plant cell walls).

Proteins → Amino Acids
- Function: Structural support, enzymes, transport molecules, hormones, antibodies.
- Examples: Enzymes (e.g., amylase, pepsin), hemoglobin, collagen, antibodies.
- Transported by the circulatory system to the liver
- In the liver are converted into sugars
- Some are transported to body cells and used to build enzymes and other proteins
- The liver also converts waste amino acids to urea which exits the body as urine

Lipids → Glycerol + Fatty Acids
- Absorbed into the small intestine and form triglycerides coated with protein to make them water soluble
- Then they can move into the circulatory system and get broken down further to be used for energy and storage.

Nucleic Acids → Nucleotides
- Function: Store and transmit genetic information (DNA, RNA).
- Examples: DNA (deoxyribonucleic acid), RNA (ribonucleic acid).
- Nucleotide Structure: Composed of a nitrogenous base (adenine, thymine/uracil, cytosine, guanine), a pentose sugar (deoxyribose in DNA, ribose in RNA), and a phosphate group.
- Examples of Nucleotides: Adenine, thymine (in DNA)/uracil (in RNA), cytosine, guanine.

13
Q

How do the processes of inhaling and exhaling work to deliver oxygen and remove carbon dioxide from the body?

A
  • Lungs are not muscular and cannot ventilate themselves
  • Instead, the whole thorax moves and changes size due to two sets of muscles: intercostal muscles and the diaphragm (large, dome shaped muscle)
  • This also controls the air pressure in
    the lungs

1) Inspiration (or inhalation)
- Diaphragm contracts and moves downwards
- Intercostal muscles contract and the thoracic cage (ribs) moves upward and outward
- The volume of the chest cavity increases and the air pressure in the thoracic cavity decreases
- The air pressure in the lungs is lower than the air pressure outside the body
- Since air moves from areas of high to low pressure it will rush into the lungs

2) Expiration (or exhalation)
- Diaphragm relaxes and moves up
- Intercostal muscles relax and the thoracic cage (ribs) moves downward and inward
- The volume of the lungs decreases and the air pressure in the lungs increases
- Since air moves from areas of high to low pressure it will rush out of the lungs
→ This is done by squeezing the chest cavity, help from the elastic recoil of tissues and the thoracic and abdominal wall muscles

14
Q

Know the specific path that oxygen takes as it moves through our body.

A

Inhalation: Oxygen enters the body through the process of inhalation. When we breathe in, air enters the nasal passages or mouth and travels down the trachea (windpipe).

Trachea and Bronchi: The trachea branches into two bronchi, each leading to one lung. These bronchi further divide into smaller bronchioles, which eventually reach the alveoli.

Alveoli in the Lungs: The alveoli are small, thin-walled air sacs located at the end of the bronchioles in the lungs. They are surrounded by capillaries (tiny blood vessels).

Gas Exchange: In the alveoli, oxygen diffuses across the thin alveolar membrane into the capillaries surrounding the alveoli. This is facilitated by a concentration gradient, where oxygen moves from an area of higher partial pressure (in the alveoli) to an area of lower partial pressure (in the capillaries).

Transport in the Blood: Oxygen binds to hemoglobin molecules in red blood cells (RBCs) within the capillaries of the lungs. Each hemoglobin molecule can carry four molecules of oxygen.
The oxygenated blood is then transported away from the lungs through pulmonary veins, which carry it to the heart.

Heart: The heart pumps oxygen-rich blood through the left atrium and left ventricle to be distributed to the rest of the body.

Systemic Circulation: Oxygenated blood leaves the heart through the aorta, which branches into smaller arteries that deliver oxygen to tissues throughout the body.

Capillary Exchange: At the capillary level in tissues, oxygen diffuses out of the capillaries into the surrounding cells due to the concentration gradient (from high partial pressure in blood to lower partial pressure in tissues).

Cellular Respiration: Inside cells, oxygen is used in cellular respiration to produce ATP (adenosine triphosphate), which is the energy currency of the cell. Oxygen serves as the final electron acceptor in the electron transport chain, generating ATP through oxidative phosphorylation.

Carbon Dioxide (CO2) Transport: As cells use oxygen, they produce carbon dioxide (CO2) as a waste product. CO2 diffuses into the bloodstream and is transported back to the lungs through the venous circulation.
In the lungs, CO2 is exchanged for oxygen at the alveoli during exhalation.

Exhalation: Carbon dioxide-rich blood returns to the heart via the pulmonary arteries and is then pumped to the lungs.
During exhalation, carbon dioxide is expelled from the body as we breathe out.

15
Q

How is the brain involved in the respiratory system?

A
  • In one day humans will inhale/exhale on average 21, 600 times. We don’t have to think about breathing!
  • Out autonomic nervous system controls ventilation
  • The brain coordinates breathing movements and monitors volume of air in the lungs and blood
    -The respiratory centres in the brain contain chemoreceptors that detect pH levels in the blood
  • They send signals to the respiratory centres of the brain to adjust the ventilation rate and change acidity by increasing or decreasing the removal of CO2
  • Therefore, breathing is initiated by the rising CO2 concentration in the blood
  • Fun Fact! When you hold your breath CO2 does not get released, increasing the pH of your blood
  • Diffusion is when a substance moves from an area of high concentration to an area of low concentration
16
Q

Know the sequence of blood flowing through the heart.

A

Right Atrium: Deoxygenated blood returns to the heart from the body through the superior vena cava (from upper body) and inferior vena cava (from lower body). Blood enters the right atrium of the heart.

Tricuspid Valve: From the right atrium, blood flows through the tricuspid valve into the right ventricle. The tricuspid valve prevents backflow of blood into the right atrium when the ventricle contracts.

Right Ventricle: The right ventricle contracts, pumping deoxygenated blood through the pulmonary valve into the pulmonary artery.

Pulmonary Artery: The pulmonary artery carries deoxygenated blood away from the heart and toward the lungs.

Lungs: In the lungs, blood undergoes gas exchange: carbon dioxide (CO2) diffuses out of the blood into the alveoli (air sacs), and oxygen (O2) diffuses from the alveoli into the blood. Blood becomes oxygenated (oxygen-rich) in the lungs.

Pulmonary Veins: Oxygenated blood returns to the heart from the lungs through the pulmonary veins. Pulmonary veins enter the left atrium of the heart.

Mitral Valve (Bicuspid Valve): From the left atrium, blood flows through the mitral valve (bicuspid valve) into the left ventricle. The mitral valve prevents backflow of blood into the left atrium when the ventricle contracts.

Left Ventricle: The left ventricle contracts, pumping oxygenated blood through the aortic valve into the aorta.

Aorta: The aorta is the largest artery in the body and carries oxygenated blood away from the heart to all parts of the body. From the aorta, oxygenated blood is distributed through systemic arteries to tissues and organs throughout the body.

Systemic Circulation: Oxygenated blood reaches capillaries in tissues where oxygen and nutrients are delivered, and waste products like carbon dioxide are picked up.

Superior and Inferior Vena Cava: Deoxygenated blood returns to the heart through the superior and inferior vena cava, completing the circulation cycle.

16
Q

What are the components of blood? What is the function of each?

A

Plasma
- Clear, yellowish fluid made up of mostly water and dissolved proteins
- It also carries nutrients, gases, and wastes
- Fun Fact! Fibrinogen (a blood plasma protein made in the liver) is responsible for normal blood clotting, and gets converted into fibrin to form a blood clot.

Red Blood Cells
- Have no nucleus
- Contain approximately 280 million molecules of hemoglobin each
- Remember hemoglobin transports oxygen into the blood
→ Oxygen is absorbed by blood in the lungs, binds chemically to the hemoglobin, and releases it in the presence of body cells that need it

White Blood Cells
- Help fight infection by destroying pathogens

Platelets
- Fragments of cells that play a key role in blood clotting

17
Q

What is gas exchange? What systems are involved in this process? Where does this happen?

A

Lungs - Contain sacs lined with a moist
surface to increase surface area for gas
exchange. Blood transports gases to cells
via diffusion. Ie: humans and large animals

  • Because we are large organisms oxygen cannot diffuse into all of our cells directly from the air, and waste (CO2) cannot be directly removed from the body
  • We have a ventilation system which uses blood to deliver nutrients and remove waste
  • Gases need a moist surface (such as our lungs) in order to diffuse, allowing oxygen to move into the blood and carbon dioxide to move out
    -This ventilation system maintains a concentration gradient between the air sacs found in our lungs (called alveoli) and the blood, and within our tissues
  • Breathing out keeps the CO2 in the alveoli low so it can diffuse out of the blood
  • Breathing in keeps the O2 concentration in the alveoli high so it diffuses into the blood
18
Q

How are electric signals involved in the circulatory system?

A
  • The heart’s electrical system controls the timing of your heartbeat by regulating:
    → Heart rate (# of heart beats per minute)
    → Heart rhythm (pumping action of the 4 chambers)
  • The heart is made up of two types of cells that enable electrical signals to control heartbeat:
    → Conducting Cells (carry the electrical signal)
    → Muscle Cells (allow chambers to contract)
  • An electrical signal starts in a group of cells at the top of the heart called the Sinoatrial (SA) node
  • The signals are passed along a series of pathways that stimulate the atria and the ventricles to contract
  • This then stimulates the cells next to each other to continue to pass on the signal
  • This allows contractions to happen
  • The heartbeat happens as follows:
    1. The SA node (also called the pacemaker of the heart) sends out an electrical impulse
    2. The upper chambers (atria) contract
    3. The AV node sends an impulse into the ventricles 4. The lower chambers (ventricles) contract or pump
    5. The SA node sends another signal to the atria to contract, starting the cycle all over again
19
Q

Know the rules associated with a proper two part scientific name and what each part represents

A

BINOMIAL NOMENCLATURE
The science of naming plants and animals
3 rules:
- Always italicized
- First letter is always capital of first word (Genus)
- First letter of second word (species name, never used alone) is lowercase

19
Q

Glucose and oxygen mix together to produce ATP energy. Where does this reaction take place? How do glucose and oxygen get transported to this part of the cell?

A

Mitochondria: These organelles are often referred to as the powerhouses of the cell because they are the site of cellular respiration, where energy in the form of ATP (adenosine triphosphate) is produced.

Transport of Glucose and Oxygen:
- Glucose: Glucose is transported into the cell through facilitated diffusion or active transport, depending on the type of cell and its needs. Once inside the cell, glucose is broken down through a process called glycolysis to produce pyruvate. This occurs in the cytoplasm of the cell.
- Oxygen: Oxygen enters the cell primarily through diffusion across the cell membrane. It is then transported to the mitochondria where it is used in the final steps of cellular respiration.

Cellular Respiration: The complete breakdown of glucose to produce ATP occurs in several stages:
- Glycolysis: This takes place in the cytoplasm and converts glucose into pyruvate, producing a small amount of ATP and NADH (a molecule that carries energy).
- Citric Acid Cycle (Krebs Cycle): Pyruvate is transported into the mitochondria where it is further broken down in the citric acid cycle to produce more ATP, NADH, and FADH2 (another energy-carrying molecule).
- Electron Transport Chain (ETC): NADH and FADH2 donate their electrons to the electron transport chain, located in the inner mitochondrial membrane. As electrons move through the ETC, they create a proton gradient that drives ATP synthesis through oxidative phosphorylation.

20
Q

Distinguish between different kingdoms (including Kingdom Plantae) in terms of the types of cells involved, methods of reproduction, how energy is obtained, examples, etc.

A

6 kingdoms of living things:
Eubacteria (bacteria)- prokaryotic
Achaebacteria (archaea)- prokaryotic
Protista- eukaryotic
Fungi- eukaryotic
Plantae- eukaryotic
Animalia- eukaryotic

Kingdom Plantae:
- Cell Types: Plants are multicellular organisms composed of eukaryotic cells. They have specialized structures like cell walls (composed of cellulose) and chloroplasts for photosynthesis.
- Organism not classified as a plant, animal, or fungus
- Reproduction: Plants reproduce sexually (through the fusion of gametes) and asexually (via fragmentation, budding, or spores).
- Energy Acquisition: Plants are autotrophic, obtaining energy through photosynthesis. They convert sunlight, water, and carbon dioxide into glucose and oxygen.
- Primarily classified based on how they obtain nutrients. Animal-like heterotrophs (eat food). Plant-like autotrophs (make food) contain chlorophyl
- Examples: Examples include flowering plants (angiosperms) such as roses, trees like oak or pine, and non-flowering plants like ferns and mosses.

Kingdom Animalia:
- Cell Types: Animals are multicellular eukaryotes with specialized tissues and organs. They lack cell walls but have complex structures like nervous and muscular systems.
- Reproduction: Most animals reproduce sexually, with specialized reproductive organs. Asexual reproduction can occur in some species (e.g., budding in hydra).
- Energy Acquisition: Animals are heterotrophic, obtaining energy by consuming other organisms or their products. They rely on ingesting organic matter for nutrients.
- Examples: Examples include mammals (like humans, dogs), birds (like eagles, sparrows), reptiles (like snakes, turtles), amphibians (like frogs, salamanders), and fish (like trout, sharks).
● All animals have cells which are organized into tissues except sponges
- All animals except sponges, corals, hydras, jellyfish and sea anemones have 3 layers of cells:
○ Ectoderm: outer layer produces the skin, nerve tissue and some sense organs
○ Mesoderm: middle layer produces muscles, blood kidneys and reproductive organs
○ Endoderm: inner layer produces lungs, liver, pancreas, bladder and stomach lining
Some animals (worms, scorpions, etc.) are segmented
○ Their body is divided into repetitive segments
- Advantages
○ Effective mobility as segments move independently
○ If a segment is damaged other segments can still function
- Nerve and muscle tissues allow the development of complex and fast movement in most animals
- Some animals are sessile, meaning they are fixed in one spot and cannot move independently
- Example: sponges move when young adults but as adults become completely stationary
- Invertebrates: animals without backbones
○ 95% of animals are invertebrates!
○ Examples: sponges, cnidarians, worms, molluscs, echinoderms, arthropods
- Vertebrates: animals with backbones
○ Examples: fish, amphibians, reptiles, birds, and mammals

Kingdom Fungi:
- Cell Types: Fungi are primarily multicellular (though some are unicellular like yeasts) eukaryotic organisms. They have cell walls made of chitin and obtain nutrients through absorption.
- Reproduction: Fungi reproduce sexually and asexually. Sexual reproduction involves fusion of specialized hyphae or spores, while asexual reproduction occurs through fragmentation or budding.
- Energy Acquisition: Fungi are heterotrophic, obtaining nutrients through external digestion. They secrete enzymes onto their food source and absorb the digested nutrients.
- Examples: mushrooms, molds (like Penicillium), yeasts (like Saccharomyces cerevisiae), and lichens (symbiotic organisms consisting of fungi and algae).

Kingdom Protista (often considered a diverse group of unicellular eukaryotes):
- Cell Types: Protists are mostly unicellular eukaryotes but can be colonial or multicellular. They may have structures like cilia, flagella, or pseudopods for movement.
- Reproduction: Protists reproduce sexually and asexually. Some undergo simple cell division (binary fission), while others have complex life cycles involving alternation of generations.
- Energy Acquisition: Protists can be autotrophic (photosynthetic) or heterotrophic (ingesting organic matter or absorbing nutrients).
- Examples: Examples include algae (like diatoms, green algae), protozoa (like amoeba, Paramecium), and slime molds.

Kingdom Archaebacteria
- (tiny organisms, made from prokaryotic cells which only have DNA). Only exists in extreme environments:
- Low oxygen (underground)
- Hot temp (volcanoes, hot places where humans can’t be)
- High salt (ocean)

Kingdom Eubacteria
- Bacteria are unicellular prokaryotic organisms with simple cellular structures.
- They have a cell wall made of peptidoglycan (except for some bacteria that lack cell walls or have different compositions).

21
Q

Know characteristics of prokaryotic organisms (reproduction, movement, etc.) and examples

A

before nucleus
- Ancient, primitive cell
- No nucleus
- No membrane bound organelles (just ribosomes)
- All are unicellular
- Smaller and more simple than Eukaryotic Cells
- DNA is single stranded and circular
Example: all bacteria

Prokaryotes are single-celled organisms
● Prokaryotic microbes belong to the kingdoms bacteria and archaea

There are three common shapes of prokaryotic microbes:
○ Spherical (cocci)
○ Rod-like (bacilli)
○ Spiral (spirilla)

Examples of bacteria:
-Gram positive
-Cyanobacteria
-Proteobacteria
-Spirochete
-Chlamydia

Archaea
Archaea were first discovered in environments with extremely harsh living conditions
● They are now grouped based on the three types of extreme conditions in which they are found:

1)Halophiles: salt lovers (areas of high salt)
2)Thermophiles: heat lovers (areas of hot water)
3)Methanogens: lack oxygen (ie. landfills)
__________________________________
Prokaryote reproduction

All prokaryotes reproduce asexually
→ This means making identical offspring from one parent cell
● There are different ways asexual reproduction can occur

Prokaryotic cells reproduce using binary fission: one cell splits into two identical cells

21
Q

What is the difference between bacteria and archaea?

A

Archaea
- tiny organisms, made from prokaryotic cells which only have DNA
- Only exists in extreme environments:
- Low oxygen (underground)
- Hot temp (volcanoes, hot places where humans can’t be)
- High salt (ocean)

Bacteria
- tiny organisms, made from prokaryotic cells which only have DNA
- Exists everywhere

22
Q

Know some examples of archaea and their extreme environments

A

1)Halophiles: salt lovers (areas of high salt)
2)Thermophiles: heat lovers (areas of hot water)
3)Methanogens: lack oxygen (ie. landfills)

22
Q

Know bacteria’s different shapes and their proper names

A

○ Spherical (cocci)
○ Rod-like (bacilli)
○ Spiral (spirilla)

23
Q

What is a virus? Are they considered living? How are they classified?

A

-Don’t have proteins, mechanisms
-Can reproduce when invade organisms like humans, bacteria
-Don’t have cells
-Made up of DNA (contains genetic information, chicken pox, shingles are DNA viruses) Only goes therough step 1
-OR RNA (Translates genetic info into proteins). Can remain undetected in an organisms for a long time and spread throughout body. Can undergo mutations more often goes through step 1 and 2

Retrovirus
-RNA can turn into DNA
-The longer they stay, the better they can turn into DNA
-Disguised as DNA
-Very hard to treat, can even be impossible

23
Q

Know characteristics of eukaryotic organisms (including sponges) and examples

A

-(complex) cells
- have organelles (nucleus, ribosomes, etc.)
- bigger than bacteria:
Animals
Plants
Fungus (mushrooms, mold, algae)
Protists (parasites) feed on hosts

Eukaryotic organisms are characterized by having complex cells with membrane-bound organelles and a defined nucleus containing their genetic material (DNA).

Here are some key characteristics and examples of eukaryotic organisms:

Cellular Organization: Eukaryotic cells have membrane-bound organelles such as mitochondria, endoplasmic reticulum, Golgi apparatus, and lysosomes, among others.

Nucleus: The genetic material (DNA) of eukaryotic organisms is contained within a nucleus, which is separated from the rest of the cell’s contents by a nuclear membrane.

Size and Complexity: Eukaryotic cells are generally larger and more complex than prokaryotic cells, which lack membrane-bound organelles and a nucleus.

Reproduction: Eukaryotic organisms can reproduce sexually or asexually, depending on the species.

Examples of eukaryotic organisms include:

Animals: All animals, including mammals (like humans, dogs, and elephants), birds (such as eagles and sparrows), reptiles (like snakes and turtles), amphibians (such as frogs and salamanders), and fish (like trout and tuna).

Plants: All plants, from flowering plants (like roses and daisies) to trees (such as oak and pine trees), shrubs, ferns, mosses, and algae.

Fungi: Fungi include mushrooms, molds, yeasts, and mildews. They play crucial roles in ecosystems, such as decomposition and nutrient cycling.

Protists: This diverse group includes unicellular organisms like amoebas, paramecia, and euglenas, as well as multicellular forms like algae (e.g., seaweed) and protozoans (e.g., malaria-causing Plasmodium).

24
Q

Know the different types of body symmetry that organisms have

A
  • Different arrangements of cells, tissues and organs= different body plans
  • Sponges are animals with asymmetrical body plans and irregular bodies

Radial Symmetry: Animals can be divided along any plane parallel with the body axis

Bilateral Symmetry: Animals can be
divided into two mirror halves only along one plane through the central axis

25
Q

Know the five steps in the lytic cycle for virus reproduction.

A

The Lytic Cycle: DNA viruses deactivate the host mRNA & take control of the host’s machinery to make their own virus particles (potentially 1000 made). Once they are made, the new viruses destroy the host cell & are released to the neighbouring cells.

Attachment: proteins on the surface of the virus bind to protein receptors on the surface of the host cell’s membrane.

Entry: The virus injects its genetic material (DNA or RNA) into the bacterial cell.

Replication: The host cell makes more viral DNA or RNA and proteins.

Assembly: New viral particles are assembled.

Lysis and Release: The host cell breaks open and releases new viral particles

25
Q

How do the lytic and lysogenic cycles differ?

A

The Lysogenic Cycle: The virus enters and then attach their DNA to the host’s chromosomes.

  • When the viral DNA enters the host cell’s chromosome it may remain dormant (inactive) and later activate and instruct the host cell to produce more viruses through the lytic cycle.

RNA viruses get access to the host cell and change the cell’s genetic material to its own
→ It is then replicated every time the host goes through mitosis
→ This lets it spread without being detected and destroyed by the host immune system

→ Once activated, it will follow the Lytic Cycle and can be detected by the organism; however, at this point too much damage has already been done

Lytic Cycle Viruses: newly formed viruses burst from the host cell, usually killing it
→ In multicellular hosts these newly formed viruses infect
neighbouring cells
Result: damage to host varies

Lysogenic Cycle Viruses: effects to the host might not be
immediate
→ Some viruses may be dormant within the cell and only go through a lysogenic cycle for a prolonged period of time
→ The virus cannot be detected and no symptoms appear
→ The virus is able to spread into other cells through replication without actually killing the host cells