3-Bacterial Metabolism Flashcards

1
Q

how to bacteria reprod

A

~binary fission~
1 cell splits into 2

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2
Q

reproduction steps

A
  1. genome replicate
  2. cell elongation
  3. divison septum forms
  4. separation
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3
Q

typical growth curve phases

A
  1. lag- no inc in # of cells, fed nutrients to prep for reprod
  2. log- exponential inc in cells, uber fast
  3. stationary- nutrients are used up, plateau, divisioin=death
  4. decline- waste products built up, exponential dec
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4
Q

when most sensitive to antimicrobial

A

lag + log phases

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5
Q

less sensitive to antimicrobials

A

stationary phase

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6
Q

cell density determined by?

A

colony counts on agar plate OR optical density

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7
Q

factors that determine growth

culture

A
  1. pH
  2. oxygen
  3. nutrients of media
  4. temp
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8
Q

broad classifications

A
  1. how use oxygen
  2. how use carbon/energy source
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9
Q

aerobe

A

-exclusively aerobic respir
-oxygen terminal electron receptor

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10
Q

facultative anaerobe

A

-use respiration or fermentation
-grow in presence or absence of oxy

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11
Q

anaerobe

A

-exclusively ferment or anaerobic
-if get oxygen then die (strict)

can be aerotolerant that not use oxy just tolerate

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12
Q

microaerophilic

A

grow best at low oxy (5-10%) but tolerate atomospheric O2 (21%)

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13
Q

how bacteria counteract ROS

A
  1. SOD converts superoxide to hydrogen peroxide
  2. catalase detoxifies hydrogen peroxide to water and oxy

enzs not present in obligate anaerobes

superoxide dismutase

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14
Q

aerobic energy production

A

most efficient energy generating mode

O2 is terminal electron acceptor

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15
Q

anaerobic energy production

A

inorganic terminal receptors (NO3, SO4)

some facultative orgs and some obligate anaerobes

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16
Q

fermentation energy production

A

organic metabolic intermediates for terminal electron receptors

least efficient

17
Q

fermentation of pyruvate products

A

acids- if a bacteria uses sugar will result in acid
-can id bacteria based on end products pH

18
Q

where folate comes from

A

in humans from diet (preformed)
in bacteria from para-aminobenzoic acid

need for syn of purines and thymidine

19
Q

nucleic acid pathway

A
  1. DHDP + PABA (dihydropteroate diphosphate, paraaminobenzoic acid)
  2. DHPS enzyme (dihydropteroate synthase)
  3. dihydrofolic (DHF) acid
  4. DHFR enzyme (dihydrofolate reductase)
  5. tetrahydrofolic (THF) acid
  6. purines > DNA/RNA or thymidine > DNA
20
Q

sulfonamide blocks what

A

DHPS enzyme
(dihydropteroate)

21
Q

DHFR inhibitor blocks what

aka trimethoprim

A

DHFR enzyme
(dihydrofolate reductase)

22
Q

replication steps

A
  1. start at origin of rep
  2. two replication forks in oppo directions until terminal site

topoisomerase required to unwind so can target with antibiotics

23
Q

transcription and translation

A

happen simultaneously in cytoplasm
-ribosomes bind free 5’ end of nascent mRNA (make RNA as transcription happening)

24
Q

ribosomes in translation

A

70S = 30S (with 16S rRNA) + 50S (with 5S and 23S rRNA)

25
other names for peptidoglycan layer
murein layer cell wall sacculus
26
peptidoglycan composistion
alternating NAG-NAM units -NAG/GlcNAC, NAM/MurNAC NAM has pentapeptide side chain
27
pentapeptide side chain comp
1. L Ala 2. D-Glu 3. DAP 4. D-Ala 5. D-Ala
28
transglycosylation
lengthening peptido strands by adding units covalently linked NAG-NAM+pentapeptide enzymes: transglycosylases
29
transpeptidation
peptide bond b/t 3rd position and 4th positon of adj strands L-Lys or DAP (diamino acid) to D-Ala by transpeptidases/penicillin binding protein (PBP) | targets for penicillins and B-lactam antibiotics
30
peptidoglycan synthesis
1. NAG and NAM in cytoplasm 2. NAM-pentapeptide made and added to bactoprenol first then NAG added 3. bactoprenol lipid carrier across membrane to inner leaflet 4. attachment to growing end of chain
31
determinant of survival
if cell membrane or not