Week 13 / Microbiology 3 Flashcards

1
Q

What are bacterial colonies, and how can they differ in appearance?

A

Bacterial colonies are aggregates of individual bacteria that form visible clusters on a large scale. They can vary in shapes, colors, and sizes depending on the species. While the appearance of colonies can provide clues, it is an inaccurate method for classification.

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2
Q

What are the common bacterial cell shapes?
What are there sizes?
and how are they observed?

A

cocci (spheres), bacilli (rod-shaped), and spiral bacteria.

They range in size from 1 to 10μm

must be observed under a microscope due to their small size.

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3
Q

Question:
What are the different arrangements of cocci bacterial cells, and can you provide examples?

A
  • Monococcus: single cells (e.g., Micrococcus flavus)
  • Diplococcus: paired cells (e.g., Neisseria gonorrhoeae)
  • Staphylococci: grouped cells (e.g., Staphylococcus aureus)
  • Streptococci: chained cells (e.g., Streptococcus pyogenes)
  • Tetrads: groups of 4 cells in the same plane (e.g., Micrococcus luteus)
  • Sarcina: cuboidal arrangements of 8 cells (e.g., Sarcina spp.).
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4
Q

What are the different arrangements of bacilli bacterial cells, and can you provide examples?

A
  • Bacillus: single rod (e.g., Bacillus cereus)
  • Diplobacilli: two bacilli side by side (e.g., Coxiella burnetii)
  • Streptobacilli: chains of bacilli (e.g., Streptobacillus moniliformis - Rat Bite Fever).
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5
Q

What are the different types of spiral bacteria, and can you provide examples?

A
  • Spirillum: a rigid, spiral-shaped Gram-negative bacterium (e.g., Campylobacter jejuni or Helicobacter pylori)
  • Spirochete: a thin, long, and more flexible bacterium (e.g., Treponema pallidum).
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6
Q

What are the key structural differences between eukaryotic and prokaryotic cells?

A

Eukaryotic cells have a membrane-enclosed nucleus and organelles such as mitochondria.

Prokaryotic cells lack a membrane-bound nucleus, instead having a nucleoid region. Some prokaryotes have a capsule, and they may possess a flagellum for movement.

Both types of cells have ribosomes and a cell membrane, but prokaryotes also have a cell wall, which is only present in some eukaryotes.

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7
Q

How do prokaryotic cells differ from eukaryotic cells, and why can they adapt more readily to environmental changes?

A

Prokaryotic cells are simpler in structure than eukaryotic cells and can adapt more readily to environmental changes.

They have the ability to metabolize a wider range of substrates, which allows them to survive in more diverse environments.

prokaryotic cells are more flexible and efficient in responding to environmental changes than eukaryotic cells.

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8
Q

What are the general categories of bacterial cell components, and what functions do they serve?

A
  • Structural: includes the cell wall and plasma membrane
  • Genetic material: includes the nucleoid (chromosomal DNA) and plasmids
  • Protein production: carried out by ribosomes
  • Motility: involves structures like flagella and pilli
  • Specialist structures: such as endospores (for survival) and capsules/slime layers (for protection).
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9
Q

What is the role of the bacterial cell wall, and how do Gram-positive and Gram-negative bacteria differ?

A

Answer:
The bacterial cell wall, made of peptidoglycan, provides shape and protects the cell from osmotic lysis.

Bacteria are divided into two major groups based on their cell wall structure:

  • Gram-positive bacteria have a thick peptidoglycan layer with a single plasma membrane.
  • Gram-negative bacteria have a thinner peptidoglycan layer but possess two plasma membranes.
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10
Q

What is peptidoglycan, and what are its key characteristics and differences between Gram-positive and Gram-negative bacteria?

A

Peptidoglycan is a polymer composed of sugars and amino acids, specifically alternating residues of β-(1,4) linked N-acetylglucosamine (NAG) and N-acetylmuramic acid (NAM). Key characteristics include:

  • A chain of 3 to 5 amino acids is attached to NAM.
  • It allows particles of approximately 2 nm to pass through in both Gram-positive and Gram-negative bacteria.
  • The thickness of the peptidoglycan layer varies between Gram-positive (90% of cell weight) and Gram-negative bacteria (10% of cell weight).
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11
Q

What are the key components and functions of the plasma membrane in bacteria?

A
  • Lipid bilayer: Forms the fundamental structure.
  • Proteins: Embedded in the bilayer, providing various functions.
  • Lipopolysaccharides: Present in Gram-negative bacteria, contributing to membrane structure.

Key functions include:
- Retention of cytoplasm: Maintains the internal environment of the cell.

  • Segregation of internal environment: Separates cellular components from the external environment.
  • Support for proteins: Anchors proteins that play roles in transport and signaling.
  • Selectively permeable: Regulates the movement of substances in and out of the cell.
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12
Q

What are the two main types of membrane proteins in the plasma membrane, and what are their key characteristics and functions?

A
  1. Integral Proteins:
    • Comprise approximately 75% of membrane proteins.
    • Are tightly attached to or stretched across the lipid bilayer.
    • Function primarily in ion transport and can form channels or transporters.
  2. Peripheral Proteins:
    • Make up about 25% of membrane proteins.
    • Are soluble in aqueous environments, meaning they do not span the membrane.
    • Can include enzymes like cholesterol oxidases, which deplete eukaryotic cells of cholesterol.
    • Often involved in signaling pathways or serve as enzymes
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13
Q

What is lipopolysaccharide (LPS), and what are its structural components and implications for health?

A

Lipopolysaccharide (LPS) contributes to the structural integrity of bacterial cells and consists of three domains:

  1. O Antigen: The outermost part that varies among different bacterial species.
  2. Core Antigen: A central region that connects the O antigen to Lipid A.
  3. Lipid A: Anchors the LPS to the bacterial membrane and is responsible for many of its biological activities.

Key implications include:
- Pro-inflammatory immune response: LPS can stimulate a strong immune reaction.
- Health risks: Small amounts can cause illness, leading to conditions like endotoxemia, which may result in septic shock.
- Manufacturing control: LPS content is highly regulated in sterile manufacturing processes.
- Limulus Amebocyte Lysate (LAL) Assay: A test used to detect the presence of LPS in products, indicating potential contamination.

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14
Q

What are flagella in bacteria, and what roles do they play in bacterial motility and pathogenesis?

A

Flagella are external structures in bacteria involved in motility (movement) and have the following characteristics:

  • Positioning and Quantity: The number and arrangement of flagella depend on the bacterial species.
    • Monotrichous: A single flagellum (e.g., Vibrio cholerae).
    • Lophotrichous: Multiple flagella at one end.
    • Amphitrichous: A flagellum at both ends.
    • Peritrichous: Flagella distributed around the cell (e.g., Escherichia coli).
  • Size: Flagella are long compared to the bacterial cell, measuring approximately 10 μm.
  • Power Source: They are powered by H⁺ ion flow (occasionally Na⁺ ions).
  • Pathogenic Role:
    • Flagella are crucial for the virulence of V. cholerae.
    • In Helicobacter pylori, flagella help propel the bacteria through the mucus lining in the stomach, aiding in infection.
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15
Q

What are pili (fimbriae) in bacteria, and what are their types and functions?

A

Pili, also known as fimbriae, are external components primarily found in Gram-negative bacteria. They serve various functions and are categorized into two main types:

  1. Conjugative Pili:
    • Facilitate the transfer of DNA between two bacteria during a process called conjugation.
    • Play a critical role in horizontal gene transfer, contributing to genetic diversity.
  2. Type IV Pili:
    • Involved in twitching motility, allowing bacteria to move across surfaces.
    • Essential for adhesion to surfaces and in processes such as biofilm formation.

Overall, pili enhance bacterial adhesion, motility, and genetic exchange, contributing to their adaptability and survival.

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16
Q

What are capsules and slime layers in bacteria, and what are their characteristics and functions?

A

Flashcard Answer:
Capsules and slime layers are external structures in bacteria, usually composed of polysaccharides. Their key characteristics and functions include:

  • Composition: The exact composition varies by species, such as the D-glutamic acid capsule found in Bacillus anthracis.
  • Types:
    • Capsule: If the structure is organized and permanent.
    • Slime Layer: If the structure is loosely formed and more fluid.
  • Growth: Capsules and slime layers are not required for in vitro growth and need to be induced under specific conditions.
  • Functions:
    • Attachment: Aid in adherence to surfaces, enhancing colonization.
    • Protection: Provide a defense against adverse environmental conditions, such as desiccation, phagocytosis, and antibiotic action.
17
Q

Flashcard Question:
What is the nucleoid in bacteria, and what are its key characteristics and components?

A

Flashcard Answer:
The nucleoid is a crucial internal component of bacterial cells and serves as the main repository of genetic material. Its key characteristics include:

  • Not Membrane Bound: Unlike the nucleus in eukaryotic cells, the nucleoid is not enclosed by a membrane.
  • Single Chromosome: Contains a single chromosome made of double-stranded DNA.
  • Bacterial Genome Size: The bacterial genome typically ranges from approximately 0.6 to 10 Mbp, which is significantly smaller than the human genome (about 3000 Mbp).
  • Presence of RNA and Proteins: In addition to DNA, RNA and proteins are also present within the nucleoid.
  • DNA Structure: The DNA is highly coiled and wrapped around nucleoid proteins, which are not the same as histones found in eukaryotic cells. This coiling helps organize and compact the genetic material within the bacterial cell.
18
Q

What are plasmids in bacteria, and what are their key characteristics and functions?

A

Plasmids are extra chromosomal pieces of DNA found in bacteria, and they have the following key characteristics and functions:

  • Extra Chromosomal: They exist independently of the chromosomal DNA.
  • Autonomous Replication: Plasmids can replicate autonomously within the host cell, allowing for independent reproduction.
  • Size Variation: Plasmids can vary in size, typically ranging from 1 to over 200 Kbp.
  • Presence in Eukaryotic Cells: While primarily found in bacteria, plasmids can also be present in some eukaryotic cells.
  • Cell-to-Cell Transfer: Plasmids can be transferred between cells, facilitating genetic exchange.
  • Non-Essential Genes: They often carry non-essential genes that can provide advantageous traits, such as:
    • Antibiotic Resistance: Genes that confer resistance to antibiotics, aiding in survival against antimicrobial treatments.
    • Virulence Characteristics: Genes that contribute to pathogenicity, such as pXO1 in Bacillus anthracis, which is involved in its virulence.
19
Q

What are ribosomes in bacteria, and what are their key characteristics and significance?

A

Ribosomes are essential internal components in bacteria that serve as the sites of protein synthesis. Their key characteristics include:

  • Subunit Composition: Bacterial ribosomes consist of two subunits:
    • Small Subunit: 30S
    • Large Subunit: 50S
  • Differences from Eukaryotic Ribosomes: Bacterial ribosomes differ from eukaryotic ribosomes in terms of:
    • Size: Bacterial ribosomes are smaller (70S total) compared to eukaryotic ribosomes (80S total).
    • Sequence: The ribosomal RNA (rRNA) sequences are different.
    • Structure: The overall structure and arrangement of proteins and rRNA are distinct.
  • Antibiotic Target: These differences make bacterial ribosomes a target for antibiotics, allowing for selective inhibition of bacterial protein synthesis without affecting eukaryotic cells.
20
Q

What are bacterial endospores, and what are their characteristics, formation triggers, and significance in human disease?

A

Flashcard Answer:
Bacterial endospores are specialized structures formed by some bacterial species, particularly Bacillus spp. and Clostridial spp. Their key characteristics and significance include:

  • Sporulation: The ability to form spores is triggered by adverse conditions, such as lack of nutrients. This process is known as sporulation.
  • Survival Mechanism: Endospores act as a survival mechanism, significantly increasing the bacteria’s resistance to extreme conditions, including:
    • Temperature
    • pH
    • Chemical biocides
  • Metabolically Inert: Endospores are metabolically inactive, allowing them to remain dormant until favorable conditions return.
  • Clinical Significance: Endospores are important in several human diseases, including:
    • Clostridium difficile-associated diarrhea (CDAD): A serious gastrointestinal infection.
    • Anthrax: Caused by Bacillus anthracis, which can be life-threatening.
  • Visualization: Endospores can be viewed using phase contrast microscopy or specific staining techniques, making them identifiable in laboratory settings.
21
Q

What are multicellular microorganisms in bacteria, and what are their key structural features and types?

A

Flashcard Answer:
Multicellular microorganisms in bacteria exhibit unique structures and relationships, characterized by the following features:

  • Chains of Cells: These microorganisms consist of chains of cells that form long filaments.
  • Trichomes:
    • Found in organisms like cyanobacteria.
    • Cells remain attached after division, forming filamentous structures.
  • Separation by Cross-Walls (Septa):
    • Cells are separated by cross-walls, known as septa, allowing for distinct compartments.
  • Hyphae:
    • Examples include organisms like Streptomycetes.
    • Hyphae are tube-like filaments that may or may not have septa.
    • The cytoplasm within hyphae can be continuous or compartmentalized.
  • Mycelial Mats:
    • These structures can form dense mycelial mats, similar to filamentous fungi, which enhance their growth and nutrient acquisition.
  • Close Spatial and Physiological Relationships:
    • The close arrangement of cells allows for specialization in function and enhanced metabolic cooperation, which can be beneficial for survival in various environments.
22
Q

What are the key structural features of viruses, and how do they differ from bacterial and fungal cells?

A

Flashcard Answer:
Viruses have a simpler structure compared to bacterial or fungal cells, characterized by the following key features:

  • Genetic Material: Viruses contain either DNA or RNA as their genetic material, which can be single-stranded or double-stranded.
  • Protein Coat (Capsid): The genetic material is encased in a protein coat known as a capsid, which protects the viral genome.
  • Receptors: Viruses have specific receptors on their surface that allow them to attach to and enter host cells.
  • Lipid Envelope (Optional): Some viruses have an additional lipid envelope derived from the host cell membrane, which can aid in entry into host cells.
  • Infection of Prokaryotes: Viruses can also infect prokaryotic organisms, specifically through:
    • Bacteriophages: Viruses that infect bacteria.
  • Non-Pathogenic Nature of Phages: Most bacteriophages are non-pathogenic to humans and can serve as useful model organisms in research.
  • Classification of Bacteriophages: Approximately 95% of bacteriophages belong to the order Caudovirales, which includes families such as:
    • Myoviridae: Characterized by long contractile tails.
    • Siphoviridae: Features long, non-contractile tails.
    • Podoviridae: Characterized by short tails.

These structural characteristics and classifications highlight the unique nature of viruses compared to cellular organisms.