Transcription and Translation Flashcards

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1
Q

Where is the transcription start site and end

A

Not at start codon, but at promoter region and goes until termination sequence then it causes RNA polymerase to drop

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2
Q

Where is the translation start site and end site

A

Starts at start codon, AUG, encoding for methionine. Ends at stop codon and has 3 termination codons, UAG, UAA, UGA

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3
Q

what is the use for sigma factor

A

responsible for promoter recognition in transcription, recognizes different promoter sequence and provides specificity

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4
Q

Why is RNA polymerase used

A

It is used to direct RNA synthesis from DNA template, and no primer is required for initiation

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5
Q

What 6 subunits do the holoenzymes contain

A

sigma factor, 2 alpha subunits, 2 beta subunits and one omega subunit

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6
Q

Why are transcription factors important in transcriptional regulation?

A

They are proteins that influence the ability of RNA polymerase to transcribe DNA into RNA. They recognize base sequences in the DNA and control the rate of transcription.

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7
Q

What is the TATA box

A

core promoter element that binds TATA-binding protein of transcription factor TFIID and determines start site of transcription

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8
Q

What does alternative RNA splicing lead to

A

multiple polypeptides from a single gene

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9
Q

What is the Wobble Hypothesis

A

Predicts that though the first two base positions are critical, H-bonding between codon and anticodon at the 3rd position is subject to modified base-pairing rules

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10
Q

Transcription start site

A

site where transcription begins

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11
Q

What are regulatory elements

A

DNA sequences bound by transcription factors

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12
Q

what happens “post-transcriptional” processing to produce mature mRNAs

A

addition of a 5’ cap
addition of a 3’ poly A tail
excision of introns

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13
Q

Cis-acting elements are a type of factor that controls gene expression, what are they?

A

DNA sequences that exert effects only over a particular gene
ex: enhancers that stimulate transcription and silencers that reduce transcription

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14
Q

Trans-acting factors are also another type of factor that controls gene expression, what are they?

A

they are regulatory proteins that bind to cis-acting elements

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15
Q

what does the DICEr do?

A

it recognizes double stranded RNA and cuts it into short double stranded pieces

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16
Q

What is translation and what does it require

A

biological polymerization of amino acids into polypeptide chains and it requires amino acids, mRNA, ribosomes and tRNA

17
Q

What does it mean when a genetic code is degenerate?

A

It means that many amino acids are specified by more than one codon

18
Q

Why is code degenerate?

A

Due to the wobble hypothesis, first two bases are critical and the 3rd position is subject to modified base-pairing rules, and a single amino acid may be coded for by more than one cell

19
Q

What is the start codon and what does it indicate?

A

AUG is the start codon to encode methionine and indicates the start of translation

20
Q

What are the codons that serve as termination codons

A

UAG,UAA, and UGA

21
Q

what are tRNAs

A

They are adaptor molecules to convert codons in mRNA to correct amino acids, they have secondary structure in form of cloverleaf, has anticodons that complement mRNAs codons, and covalently attached to corresponding amino acids

22
Q

what are ribosomes

A

they consist of ribosomal protein and RNAs they provide important catalytic functions

23
Q

tRNAS have what that pairs with the codons in mRNA

A

they have anticodons that base-pair with the codon in mRNA

24
Q

What are the 3 steps in translation

A

initiation, elongation, termination

25
Q

what does the protein structure contain

A

carboxyl group, and amino group terminals