Protiens Flashcards
what does organic mean?
Containing carbon
what are the roles of protiens
-structural
-metabolic
-transport
what elements do amino acids contain
carbon, hydrogen, oxygen, nitrogen and sometimes sulphur and phosphate
Polymer of amino acid
Polypeptide
Carboxyl/acid group
c=0
-oh
amino group
N-h
-h
What’s an R group
-variable group
how many amino acids are there?
20, 8 essential ones
what does essential mean
must get them in our diet
properties of amino acids
-they’re soluble
-they’re amphoteric
how amino acids differ
-size
-polarity
-charge
what are the positive and negative amino acids called
positive- base
negative- acid
how do amino acids join together
join by a reaction between amino group of one protein and carboxyl group of the other amino acid
-this is a condensation reaction
bond/link between amino acids
peptide link/bonds
similarity and difference between glyosidic bond and peptide bond
similarity- condensation build up and hydrolysis breaks down
difference- peptide has link between C-N and glyosidic bond between
C-O-C
amphoteric
amino group accepts H+ ions and carboxylic group donates H+ ions
-in acidic environment, amine accepts H+
-in alkaline environment, carboxyl/acid group donates H+
primary structure
specific sequence of amino aicds- one long chain, coded by the DNA of the cell
secondary structure
form when polypeptide chain takes up a particular shape through folding
forms of secondary structure
alpha helix and beta sheet
how is alpha helix and beta pleated sheet formed
hydrogen bonds between hydrogen of amine and oxygen of carboxyl
tertiary structure
secondary structure folded further to form complex shape due to 4 different bonds between acids
4 types of bond in tertiary protiens
Disulphide, ionic, hydrogen, hydrophilic/phobic interactions
hydrogen bonds
form between hydrogen atoms with slight positive charge and other atoms with a slight negative charge
-amino and carboxyl group
-give protein strength
ionic bonds
between carboxyl and amino groups that are part of R groups, positive and negative groups strongly attracted to each other