Proteins Flashcards
the single unit of a protein
amino acid
amino acid aka
residue
four components of an amino acid
- amino group
- carboxylic acid
- hydrogen atom
- variable R group / side chain
amphiprotic definition
containing both acidic and basic functional groups
essential
body cannot synthesize them
how many essential proteins are there?
8
what are the 4 classifications of amino acids?
nonpolar
polar
acidic
basic
acidic amino acids have
carboxylic acid , negative charge
basic amino acids have
amino, positive change
how to form a polypeptide
condensation reaction to join 2 amino acids
what does forming a polypeptide require?
carboxyl groups
amine
peptide
links between amino acids
what is the growth order for a polypeptide
N to C terminus
conformation
shape of a protein
what are the levels of a protein structure?
primary, secondary, tertiary, quaternary
primary structure
unique sequence of amino acids
how is the primary structure determined
by DNA
secondary structure results from…
hydrogen bonds are regular intervals along the polypeptide backbone
what are the typical shares of the secondary structure?
alpha helix
beta pleats
who discovered the alpha helical structure of protein and when?
- linus pauling
- 1961
tertiary structure describe
interactions between R groups
what happens between polar bonds /charged amino acids at the tertiary structure
hydrogen bonds
dipole-dipole
ion-dipole
what happens between non polar amino acids in the tertiary structure
hydrophic interactions
disulfide bridge
formed between the sulfhydryl groups of cysteine amino acids
proline kink
only amino acid where the R group is attached to the amino group creating a kinked shaped
all proteins have tertiary structure
quaternary structure
proteins will have a fourth level of structure that involves interactions between two or more polypeptide chains
types of quaternary structure
- fibrous
- globular
fibrous quarternary structure properties
water insoluble, threadlike
globular quarternary structure
water soluble, compact spherical
conformational change
change in the shape of a protein, can be reversible, doesn’t disrupt function but rather defines the function
example of a conformational change
carrier protein
denaturation
change in the shape of the protein that disrupts protein function
renaturation
some proteins can return to their functional shape after denaturation
Test that looks for starch
iodine
test that looks for a reducing sugar
benedict’s
test that looks for protein
Biuret
test that looks for lipid
Sudan 4
positive test colour for iodine
black
positive test colour for benedict’s
orange
positive test colour for bioret
purple
positive test colour for sudan 4
red