Microbiology and Immunology (1st) Flashcards
All information that was taught to me while attending Vanier College's "Animal Health Technology" Program, located in St-Laurent Montreal.
What are microbes and micro organisms
Minute living things that individually are usually too small to be seen with the unaided eye. Includes bacteria, fungi, protozoa and microscopic algae and viruses
What do micro organisms do
Help maintain the balance of living organisms and chemicals in our environment
What do soil microbes do
Breakdown waste and incorporate nitrogen gas from the air into organic compounds’s
What does pathogenic mean
Disease causing
What are some benefits of microbes
Makes food, clothing
What’s the genus
The first name which is capitalized
What is the specific epithet
The species name which is not capitalized
What are bacteria
Relatively simple, single celled organisms. Unicellular
What are prokaryotes
Bacterial cells which includes bacteria and Archaea
What is Bacillus
Rod shaped bacteria
What is coccus
Spherical shaped bacteria
What is spirilli
Corkscrew shaped bacteria
How do bacteria reproduce
They reproduce by binary fission
How do bacteria move
They moved by use of their flagella and cilia
What are bacterial cell walls composed of
They are composed of peptidoglycan
What is archaea
Consists of prokaryotic cells lacking peptidoglycan
What is methanogens
Produce methane as a waste product from respiration
What are extreme halophiles
Salt loving bacteria
What are extreme thermophiles
Live-in hot, sulfurous water
What are fungi
Eukaryotes, organisms whose cells have a distinct nucleus containing the cells DNA surrounded by the nuclear membrane
What is the fungi cell wall composed of
Chitin
What are masses of fungi called
Mycelia
What is hyphae
The long filaments on fungi
What is Protozoa
Unicellular eukaryotic microbes that move by pseudopods flagella or cilia
How do protozoa live
They can live as free entities or as parasites that feed off of their host
What is algae
Photosynthetic eukaryotes that are both sexual and asexual. Their cell walls are composed of cellulose
What is a virus
Contains the core of one type of nucleic acid, either DNA or RNA her. Court is surrounded by a protein coat and a lipid membrane called an envelope
What are helminths
Flatworms and roundworms
How do you classify bacteria
The cell walls contain a protein carbohydrate complex called peptidoglycan
How do you classify Archaea
The cell walls, if present, lack of peptidoglycan
How do you classify eukarya
Protists are slime molds protozoa and algae. Fungi are unicellular yeast, multicellular molds and mushrooms. Plants are mosses, firms, cornifers and flowering plants. Animals are sponges, worms, insects, vertebrates
What is cell theory
All living things are composed of cells. All cells come from previous cells
What is biogenesis
Living cells can arise only from pre-existing living cells
What is aseptic technique’s
Prevent contamination by unwanted microbes
What is fermentation
Yeasts convert the sugars to alcohol in the absence of air
What is Pasteurization
Heat just enough to kill most of the bacteria that causes spoilage
What is the germ theory of disease
Micro organisms may cause disease
What is immunity
Protection from disease provided by a vaccination
What is vaccine
Cultures of avirulent microorganisms use for preventative inoculations
What is chemotherapy
Treatment of disease by using chemical substances
What is antibiotics
Chemicals produced naturally by bacteria and fungi to act against other microorganisms
What is synthetic drugs
Chemotherapeutic agents prepared from chemicals in the laboratory
What is bacteriology
The study of bacteria
What is mycology
The study of fungi
What is Parasitology
Study of protozoa and parasitic worms
What is genomics
The study of all organisms genes
What is immunology
The study of immunity
What is virology
The study of viruses
What is recombinant DNA
Fragments of human and animal DNA that codes for proteins attached to bacteria DNA. Can be used to make large quantities of desired protein
What is microbial genetics
Studies the mechanisms by which micro organisms inherit traits
What is molecular biology
Studies how genetic information is carried in molecules of DNA and how DNA directs the synthesis of proteins
What is microbial ecology
The study of the relationship between micro organisms and their environment
What is bioremediation
Using bacteria to break down pollutants
What is biotechnology
The commercial use of micro organisms to produce foods and chemicals
What is gene therapy
Inserting a missing genes or replacing the defective one in human cells
What is an infectious disease
Disease in which pathogens invade a susceptible host
What are the characteristics of prokaryotes
The DNA is not enclosed within a membrane. Their DNA is not associated with histones. Lack membrane enclosed organelles. So walls generally contain peptidoglycan and they divide by binary fission
What are the characteristics of eukaryotes
DNA is found in cells nucleus. DNA is associated with histone and non-histone proteins. Have a membrane enclosed organelles. Cell walls are chemically simple. Cell division involves mitosis
What are diplococci
Cocci that remain in Pairs after division
What is streptococci
Cocci that divide and remain in chain like patterns
What is tetrads
Divided into planes and remain in groups of four
What are sarcinae
Divided in three planes and remain in cube like groups of eight
What are staphylococci
Divide in multiple planes and form grape like clusters
What are single bacilli
Single rods of bacteria
What are diplobacilli
Appear in pairs after division
What is Streptobacilli
Occur in chains
What is coccobacilli
Oval bacteria that look like cocci
What is vibrios
Bacteria that look like curved rods
What is Spirilla
Have a corkscrew shape
What are sphirochetes
Helical, flexible spirals
What does monomorphic mean
Cells that maintain a single shape
What is pleomorphic
Cells that have many shapes
What is a glycocalyx
A substance that surrounds cells
What is a capsule
And organized substance that is firmly attached to sell walls
What is the slime layer
Unorganized and loosely attached substance to the cell wall
What is the extracellular Polymeric substance
A Glycocalyx help cells in the biofilm attached to their target environment into each other
What is the flagella
Long filamentous appendages that propel bacteria
What is a Atrichous
Bacteria lacking flagella
What is petritrichous
Flagella distributed over the entire cell
What is polar
At one or both poles or ends of the cell
What is monotrichous
A single flagella at one pole
What is lophotrichous
A tuft of flagella coming from one pole
What is amphitrichous
Flagella at both poles of the cell
What is motility
Ability of an organism to move by itself
What is taxis
Movement of bacterium toward or away from a particular stimulus
What is chemotaxis
Chemical stimuli
What is phototaxis
Light stimuli
What is H antigen
Flagellar protein
What is serovars
Variations within a species of gram negative bacteria
What are axial filaments
Bundles of fibrils that arise at the ends of the cell beneath an outer sheathe and spiral around the cell
What are fimbriae
Can occur at the poles of bacterial cell or can be evenly distributed over the entire surface of the cell
What is a pili
Usually longer that fimbriae. Pili are involved in motility and DNA transfer
What is twitching motility
Makes contact with another surface and then retracts
What is gliding motility
Smooth gliding movement of myxobacteria
What is conjugation pili
Used to bring bacteria together allowing transfer of DNA
What is the cell wall
Semi rigid structure responsible for the shape of the cell
What is peptidoglycan
Composed of a macromolecular network
What is Porins
Proteins in the membrane that form channels
What is a lipopolysaccharide
A complex molecule that has lipids and carbs and consists of three compounds. Lipid a, core polysaccharide, o polysaccharide
What is lipid a
Lipid portion of lipopolysaccharide
What is core polysaccharide
Attached to lipid a and contains unusual sugars. Provide stability
What is o polysaccharide
Functions as an antigen
What is mycolic acid
Hydrophobic waxy lipid in their cell walls
What is a protoplast
Cellular contents that remains surrounded by the plasma membrane. May remain intact if lyses does not occur
What is an L form
Proteus that loses their cell wall and swell into irregularly shaped cells
What is a spheroplast
Cellular contents, plasma membrane and remaining outer cell wall layer inside a spherical structure
What is osmotic lysis
Bursting of a cell due to osmosis
What is the plasma membrane
Thin structure lying inside the cell wall and enclosing the cytoplasm of the cell
What is the glycoprotein
Protein attached to carbohydrate
What is a glycolipid
Lipid attached to a carbohydrate
What is a fluid Mosaic model
Dynamic arrangement of phospholipids and proteins
What is selective permeability
Selective barriers through which materials can enter and exit the cell
What is the chromatophore or thylakoid
Enzymes involved in photosynthesis found in the plasma membrane and cytoplasm
What is a mesosome
Bacterial plasmid membranes having large irregular folds
What is simple diffusion
Overall movement of molecules from an area of high concentration to an area of low concentration
What is facilitated diffusion
Integral membrane proteins function as carriers that facilitate the movement of ions or large molecules across the plasma membrane
What is osmosis
Net movement of solvent molecules across a selectively permeable membrane from an area with a high concentration of solvent molecules to an area of low concentration of solvent molecules
What is osmotic pressure
Pressure required to prevent the movement of pure water into a solution containing some solutes
What is isotonic solution
Medium in which the overall concentration of solutes equal that Found inside a cell
What is a hypotonic solution
In medium in which the concentration of solutes is lower than that inside the cell
What is a hypertonic solution
Medium having a higher concentration of solutes than inside the cell has
What is active transport
Cell using energy to move substances across the plasma membrane
What is group translocation
Special form of active transport that occurs exclusively in prokaryotes, the substance is chemically altered during transport across the membrane
What is the cytoplasm
Substance of the cell inside the plasma membrane
What is the nucleoid region
The region containing DNA
What is bacterial chromosome
Circularly arranged thread of double-stranded DNA
What is a plasmid
Small, circular, double-stranded DNA molecules
What is a ribosome
The site of protein synthesis
What is an inclusion
Reserve deposits in cytoplasm in prokaryotic cells
What are metachromatic granules
Large inclusions that take their name from the fact that they can stain red with blue dyes
What is volutin
Represents a reserve of inorganic phosphate that can be used in the synthesis of ATP
What is a polysaccharide granule
Inclusion consisting of glycogen and starch
What is the lipid inclusion
And inclusion containing lipids
What is a carboxysome
Inclusions that contain the enzyme ribose 15 diphosphate carboxylase
What is a gas Vacuoles
Hollow cavity is found in many aquatic prokaryotic
What is a magnetosome
Inclusion surrounded by invagination’s of plasma membrane
What are endospores
Gram-positive bacteria forming specialized resting cells
What is sporulation
Endospore formation within a vegetative cell
What is germination
Endospore returning to a vegetative state
What are microtubules
Long, hollow tubes made up of a protein called tubulin
What is endocytosis
A segment of a membrane enclosing a particle and bringing it into the cell
What is cytosol
Fluid portion of cytoplasm
What is cytoskeleton
Provides support and shape
What is cytoplasmic streaming
Movement of eukaryotic cytoplasm from one part of the cell to another
What are organelles
Structures were specific shapes and specialized functions that are characteristic of eukaryotic cells
What is the nuclear envelope
Double membrane surrounding nucleus
What is a nuclear pore
Tiny channels in the membrane
What is nucleoli
Condensed regions of chromosomes where RNAs being synthesized
What are histones
DNA combined with several proteins
What is chromatin
Threadlike mass of protein
What is a chromosome
Chromatic and coils into shorter and thicker rodlike bodies
What is the endoplasmic reticulum
Extensive network of flattened membranous sacs called Cisternae
What is the golgi complex
First step in the transport pathways through an organelle
What’s a transport vesicle
Releases proteins into the cistern
What is secretory vesicles
Detach from the cistern and deliver the proteins to the plasma membrane
What is Lysosomes
Contain 40+ digestive enzymes
What are vacuoles
Space or cavity in the cytoplasm of a cell that is enclosed by a membrane
What is the mitochondria
Rod shaped organelles
What is the Cristae
Folds in the inner mitochondrial membrane
What is the matrix
Semi fluid substance in the center of the mitochondrion
What is a chloroplast
Membrane enclosed structure that contains both the pigment chlorophyll and the enzyme required for the light gathering phase of photosynthesis
What are thylakoids
Chlorophyll containing flat membranous sacs
What is peroxizomes
Contains enzymes
What is a centrosome
Important to cell division
What is an Endosymbiotic theory
Large bacterial cells which lost their cell walls and engulf smaller bacterial cells
What is a metabolism
The sum of all chemical reactions within a living organism
What is catabolism
Enzyme regulated chemical reactions that release energy (the breakdown of complex organic compounds into smaller compounds)
What is anabolism
Enzyme regulated energy requiring reactions (build complex organic molecules from simpler ones)
What are metabolic pathways
Sequences of chemical reactions
What is activation energy
Collision energy required for a chemical reaction
What is a reaction rate
Frequency of collisions containing sufficient energy to bring about a reaction
What is a catalyst
Substance that speed up chemical reactions
What is an enzyme
Biological catalyst
What is a substrate
Specific substrate for a specific enzyme
What is an enzyme-substrate complex
When enzyme orients the substrate into a position that increases the probability of a reaction
What is a turnover number
Maximum number of substrate molecules an enzyme molecule converts to product each second
What is an apoenzyme
Protein portion of an enzyme
What is a cofactors
A nonprotein component
What is a coenzyme
Is a cofactors is an organic molecule
What is a haloenzyme
Whole enzyme (apoenzyme + cofactor)
What is CoA
Synthesize and breakdown fats
What is denaturation
Loss of structure due to heat
What does saturated mean
All active sites are occupied
What are competitive inhibitors
Fill active site of an enzyme and competes with normal substrate
What is a noncompetitive inhibitor
Don’t compete with substrate. Interacts with another portion of the enzyme
What is allosteric inhibition
Binds to site other than the substrates binding site
What is feedback inhibition
Stops cell from making more substances than it needs
What is a ribozyme
RNA that functions like protein enzymes
What is oxidation
Removal of electrons
What is reduction
Gain of electron
What is dehydrogenation
Loss of hydrogen atoms
What is phosphorylation
Addition of phosphate group
What is the electron transport chain
Electron carrier sequences
What is photophosphorylation
Photosynthetic cells use of phosphorylation
What is carbohydrate catabolism
Breakdown of carbohydrate molecules
What is glycolysis
Oxidation of glucose to pyruvic acid
What is enther-doudoroff pathway
Produces 2 NADPH and 1 ATP
What is cellular respiration
ATP generating process
What is aerobe
Uses oxygen
What is an anaerobe
Does not use oxygen
What is aerobic respiration
Final electron receptor is O2
What is anerobic respiration
Final electron acceptor is an inorganic molecule
What is the kerbs cycle
Cycle where the potential chemical energy stored in acetyl CoA is released step by step
What is decarboxylation
Loss of one CO2
What is the electron transport chain
Carrier molecules that are capable of oxidation and reduction
What is flavoproteins
Proteins containing flavin
What is cytochromes
Proteins with iron containing group
What is ubiquinones
Non protein carriers
What is chemiosmosis
ATP synthesis using electron transport chain
What is fermentation
Release of energy from sugars. Anaerobic.
What is lactic acid fermentation
Glucose oxidized to two molecules of pyruvic acid
What is alcohol fermentation
Glycolysis of glucose ➡️ 2 pyruvic acid and 2 ATP
What is heterolactic
Produces lactic acid
What is photosynthesis
Synthesis of organic compounds
What is carbon fixation
Synthesis of sugars by use of CO2
What are some of the destructive and beneficial actions of microbes
Breakdown waste, industrial uses, causes sickness and disease
What is a genus and epithet
Genus is the first word that is capitalized. Epithet is the second word that is not capitalized.
What groups of microbes are prokaryotic
Bacteria and archaea. No nucleus
What are eukaryotic microbes
Protists, fungi, plants, animals. Have no nucleus
What are the three domains
Bacteria, archaea, eukarya
What is the cell theory
All living things are composed of cells, cells are the basic unit of life, all cells arise from pre-existing cells
What evidence supported spontaneous generation
Maggots suddenly appearing on a corpse
How was spontaneous generation disproved
Pasteur: 2 jars filled with rotting meat. 1 covered and one uncovered. One had maggots appeared
What is the germ theory of disease
Microorganisms enter a host, cause physical and chemical change, causing malfunction of normal system function
What is the importance of Koch postulates
Provided a good general guideline to identify pathogens
What is the significance of jenners discovery
Explored innovations and immunity leading to the discovery of vaccines
What was ehrlichs magic bullet
Synthetic cure for diseases : chemotherapy
What is microbial genetics
The study of small bacteria
What is molecular biology
Branch that deals with the molecular basis of biological activity
What are beneficial uses of bacteria
Bacteria in herbivores that ferment fibers and industrial uses
What is biotechnology
Industry and food production using microbes
What is recombinant DNA
Cloning to make bacteria to find a cure
Why are biofilms important
Give microbes a layer of protection
What factors contribute to emergence of infectious disease
Microbial adaption, climate, intent to harm
What is the main feature that distinguishes prokaryotes from eukaryotes
Prokaryotes have no nucleus
How would you be able to identify streptococci through a microscope
Spherical shaped bacteria in chains
Why are bacterial capsules medically important
Gives bacteria protection against the environment and impairs phagocytosis
How do bacteria move
They move by flagella, cilia
Why are drugs that target cell walls useful
Without a cell wall, the bacteria is susceptible to destruction by chemicals
Why are mycoplasmas resistant to antibiotics that interfere with cell wall synthesis
Because they lack a cell wall
How do protoplasts differ from L forms
Protoplasts need penicillin to lose it’s cell wall whereas L form can lose it spontaneously or in response to penicillin.
Which agents can cause injury to the bacterial plasma membrane
Antimicrobial agents and alcohol cause subsequent cell death
How are simple diffusion and facilitated diffusion similar. How are they different
Simple diffusion and facilitated diffusion are similar because they are both methods of diffusion but facilitated diffusion requires a transporting molecule
Where is the DNA located in a prokaryotic cell
In the cytoplasm
What is the general function of inclusions
They are membrane enclosed nutrient storage structures
Under what conditions do endospores form
When there is a lack of nutrients in the cell
What is a nucleoid
Region in the cytoplasm where DNA is localized in prokaryotes
What is a nucleus
Area containing a nuclear membrane where the nucleolus resides.
What is smooth er
Synthesis of lipids/carbs
What is a rough er
Site of antibody production
What are three organelles are not associated with the Golgi complex.
Centrioles, mitochondria, nucleolus
What is catabolism vs anabolism
Breakdown of complex organic molecules into simpler ones. Anabolism: buildup of complex organic molecules from simpler ones
How is ATP an intermediate between catabolism and anabolism
Breakdown of fats, protein and carbs = catabolism ➡️ turns adp into ATP ➡️ energy released creates molecules = anabolism
What is a coenzyme
A non protein compound necessary for the functioning of an enzyme
Why is enzyme specificity important
Seperates all reactions
What happens to an enzyme below it’s optimal temperature? Above it’s optimal temperature?
It won’t work. It denatures with heat
Why is feedback inhibition noncompetitive inhibition
Both types slow enzyme activity
Why is glucose such an important molecule for organisms
Helps to make ATP
Outline the three ways that ATP is generated
Glycolysis, fermentation, kerbs cycle
What is the purpose of metabolic pathways
Series of chemical reactions occurring within a cell
What happens during the preparatory and energy conserving stages of glycolysis
Energy is conserved in the form of ATP. As part of the preparatory state, 2 ATP molecules are consumed
What is the value of the pentose phosphate and entner-doudoroff pathways if they produce only one ATP molecule
Good for bacteria aerobes due to low ATP yield per glucose
What are the products of the Krebs cycle
8 nadh and 2 fadh2
How do carrier molecules function in the electron transport chain
Transports electrons through the electron transport chain
Define innoculated
Introduced into environment
Define contaminants
Unwanted microbes
Define aseptic technique
Technique to exclude contaminants
Define steralized
Kills all bacteria
Define broth cultures
Large number of bacteria, easy to transport
Define agar slants
Good growth surface, easy to store and transport
Define agar deep
Used to grow bacteria who need less oxygen, also used to check motility
What is an innoculating loop
Loop used to inoculate
What is an inoculating needle
Needle used to inoculate agar deeps
What is an agar slant inoculation
Inoculate a slant by streaking the loop back and forth on the surface of the agar
What is agar deep innoculation
Innoculate an agar deep by stabbing into the agar with a needle
How do you inoculate a broth
Inoculate a broth by taking a piece of the bacteria and put it into the liquid
Why should the entire wire of the inoculating loop be red
For disinfection
Why don’t we set down the cap
Contamination
How many times do we flame the opening of the tube
3
Why must the loop be cooled before you pick up bacteria
So that you don’t kill them and cause an aerosol
What in the broth signals growth of bacteria
Turbidity
Which bacteria were gram positive
S. Aureus
Which bacteria were gram negative
E. Coli
What is a smear
Thin film of bacteria cells
What is fixing
Kills bacteria. Coagulated proteins from the cells will cause the cells to stick to the slide
What is heat fixing
Use heat to stick cells to slide
What is chemical fixing
Put methanol on cells to fix it to the slide
What is a chromophore
Colored ion
What charge does a basic stain have
Positive
What charge does an acidic stain have
Negative
Define simple stain
Only one stain
Define direct stain
Stains the bacteria
Define negative stain
Stains the background
Which stain was used in this lab
Methylene blue
What bacteria are used in thiS lab
S. EpidermidisB. Megaterium
Describe the procedure of the simple stain from a solid medium
place one loop fulls of water on the slide. Transfer a very small amount of the culture with the sterile loop. Mix with the water on the slide.pass the slide under the flame of a burner three times. Cover the spear with methylene blue and leave it for 30 seconds. Wash off methylene blue. Blot it dry.
Describe the procedure of a simple stained from a liquid medium
Place 2 loop fulls of the Liquid culture on the slide with the sterile loop. Spread the bacteria within the circle. Pass the slide through flame three times. Cover the smear with methylene blue and leave it for 30 seconds. Wash off methylene blue, blot it dry.
What happens if you apply too much heat
It distorts the cells
Define negative stain
Stains the background
What does a negative stained bacteria look like
Bacteria appears clear against Gray background
What is considered a colloidal stain
India ink or eosin
What stain did we use
Nigrosin
Do you heat fix in a negative stain ? And why
No. Less distortion so it shows morphology and size
What are cocci bacilli
Short, oval bacilli
What bacteria did we use in this lab
B. SubtilusS. Epidermidis
Describe the procedure of a negative stain
Please drop of Nickerson near one end of slide. Mix new full of broth culture in drop. Draw slide across surface like blood sample. Let smear air dry.
What is a gram stain
Differential stain that classifies gram - or gram +
What is the first step of gram staining
Primary stain. Crystal violet which stains purple and is basic
What is the second step in gram staining
Mordant. Grams iodine.
What is the third step of gram staining
Decolorizing agent. Ethanol
What is the fourth step of gram staining.
Secondary stain. Safranin.
What is the color of gram negative
Pink
What is the color of gram positive
Purple
What are bacterial cell walls composed of
Peptidoglycan
What bacteria were used in this lab
S. AureusE. ColiB. Subtilus
Describe the procedure for a Gram stain
With a fixed smear: cover smear with crystal violet for 30 seconds. Wash. Cover smear with grams iodine for 10 seconds. Wash. Decolorize. Wash. Cover smear with safranin for 30 seconds. Wash. Blot.
Are staphylococcus gram negative or Positive
Gram positive
What are structural stains
Used to identify and study the structure of bacteria
What is an endospores and how does stain penetrate it
Heat and chemical resistant. Formed from a lack of nutrients. Use 5 mins of steam
What stains endospores
Malachite green
What bacteria are used in this lab
B. MegateriumB. Subtilus
Describe the procedure for staining endospores
Please a piece of absorbant paper over the smear. Cover paper with Malachite green. Steam the slide for five minutes. Wash. Cover smear with safranin for 30 seconds wash. Blot
What is the streak plate technique
Do it in 4 quadrants. Each streak crosses previous quadrant twice
What is the spread plate technique
Diluted specimen is spread over surface
In the pour plate technique what is the dilution of the first bottle
1:99
In the pour plate technique what is the dilution of the second bottle
1:10000
In the pour plate technique what is the dilution of the third bottle
1:1,000,000
What is important with the agar media
Mixing the inoculum by rolling between your hands
What is selective media
Contain chemicals that prevent growth of unwanted bacteria
What is enrichment media
Chemicals enhance growth of desired bacteria
What is differential media
Nutrients that allow distinguish one bacteria from another
What nutrients are in tsa
0.5% peptone0.8% NaCl1.5% agar
What is msa agar and what grows on it
1.0% peptone7.5% NaCl1.5% agar1.0% mannitol0.025% phenol redGram + grows
What is in emb agar and what grows on it
1.0% peptone1.5% agar0.5% lactose0.5% sucrose0.04% eosin0.0065% methylene blueGram -
What bacteria were used in this lab
E. ColiP. AeruginosS. AureusS. Epidermidis
What happens when E. coli is on EMB agar
It turns metallic green
What grows on mannitol salt agar and what color does it turn
S. Aureus and it turns yellow
What is the fermentation tube
Contains phenol red. Detects acid and gas production from carbohydrates
What is MRVP test
Distinguishes organisms that produce acid from glucose or neutral production = acetoin.
What happens if it’s a positive MR test
It remains red. The ph = below 4.4
If the MR test is orange red
The ph 4.4-6.0
What happens if the MR test is yellow
Ph above 6.0
If acetoin is present
The upper part: turns red Negative: light brown
What happens to citrate agar if it’s a positive test
Changes to blue
What bacteria is used in the lab
E. ColiE. AerogenesA. FaecalisP. Vulgaris
P. Vulgaris ferments what?
Glucose and sucrose
What is oxidizing
Removing electrons
What is reducing
Accepts electrons
What is respiration
Oxidative metabolism
What is aerobic respiration
O2 is the final electron acceptor
What is oxidase test
Determines presence of cytochrome c.
What does catalase do
Breaks down hydrogen peroxide to water and oxygen
What is anaerobic respiration
Inorganic compounds is final electron acceptors.
Which bacteria was used
B. SubtilusE. ColiP. AeruginosaL. Lactis
If it is positive what happens in the oxidase test
Oxidase positive bacteria turn oxidase pink to purple to black.
In the nitrate test what does it mean if the broth turns red
Nitrates are present
What is p. Aeruginosa
Oxidase positive
What is e. Coli
Oxidase negative.
Were any bacteria catalase positive
All bacteria were
What does obligate mean
Require something
What does facultative mean
Can live both with or without something
What does the dye in the medium change color to
Turns pink when oxygen is present
What do obligate aerobes need
Oxygen
What do facultative anaerobes need
Either oxygen or no oxygen
What do obligate anaerobes need
No air
What do microaerophiles need
Grows best in 5%-10% carbon dioxide
What is a co2 jar used for
Grows microaerophiles
What is a reducing media
Reduced concentration of oxygen
What is sodium thioglycolate
Used in thioglycolate broth
What is special about a brewer anaerobic jar
Oxygen is excluded
What is anaerobic incubators
Air is evacuated and replaced with a mixture of co2 and nitrogen
Which bacteria is used in this lab
A. FaecalisC. SporogenesE. FaecalisE. Coli
Which bacteria were strict arrives
P. AeruginosaC. Sporogenes
Which bacteria is an aerotolerant anaerobe
E. Faecalis
Which bacteria is a facultative anaerobe
E. Coli
Why is an agar deep considered a semi solid
Because of less concentration of agar
What does a capsul protect against
Phagocytosis
What are the two bacteria that produce endospores
Bacillus and colostridum
Why is mordant used for flagella staining
Makes a complex with the crystal violet that is larger than just the dye
What is the secondary stain in the gram stain
Safranin
What does the nigrosin stain do
Repels bacteria. Only stains the background
Is it a direct or indirect stain in the simple stain
Indirect stain
What happened to the bacteria after the simple stain was added
The bacteria turned blue
Is the stain used in the simple stain acidic or basic
Basic
Which lenses are parfocal
Objective lenses
What is deamination
Removal of an amino group that is later converted to ammonium ion
What is a fermentation test
A test medium containing protein, a single carbohydrate, a ph indicator and an inverted Durham tube which is used to capture gas
What are photosystems
When chlorophyll and other pigments are packed into the thylakoids of chloroplasts
What is cyclic photo phosphorylation
Electron released from chlorophyll in photosystems 1 eventually returns to chlorophyll
What is noncyclic photophosphorylation
Electrons released from the chlorophyll in photosystems 2 and 1 don’t return to chlorophyll but instead become incorporated into nadph
What are phototrops
Use light as their primary energy source
What are chemotrophs
Depend on oxidation and reduction reactions of inorganic or organic compounds for energy
What are autotrophs
Self feeders
What are heterotrophs
Feed on others
What are photoautotrophs
Use light as a source of energy and carbon dioxide as their chief source of carbon
What is oxygenic
Produces oxygen gas
What is anoxygenic
Does not produce O2 gas
What are photoheterotrophs
Use light as a source of energy but cannot convert carbon dioxide to sugar
What are chemo autotrophs
Uses electrons from reduced inorganic compounds as a source of energy. Use co2 as source of carbon
What are parasites
Organisms that derive nutrients from a living host
What are psychrophiles
Cold loving microbes. -10-20
What are mesophiles
Moderate temp loving. 10-50
What are thermophiles
Heat loving 40-70
What is a minimum growth temperature
Lowest temp at which a species will grow
What is optimum growth temperature
Temperature at which the species grows best
What is maximum growth temperature
Highest temp at which growth is possible
What are hyperthermophiles
Microbes that have an optimum growth temp of 80* or higher
What are acidophiles
Microbes that are tolerant of acidity
What is plasmolysis
Shrinkage of a cells cytoplasm
What are extreme halophiles
Adapted to high salt concentrations that they require for growth
What are obligate halophiles
Require high salt concentrations for growth
What are facultative halophiles
Don’t require high salt concentrations but are able to grow on them
Nitrogen fixation
Use gaseous nitrogen from the atmosphere
What are trace elements
Small amounts of mineral elements
What are obligate aerobes
Microbes that require oxygen to live
What are facultative Anaerobes
Bacteria can grow in the absence of oxygen or with oxygen
What are obligate anaerobes
Bacteria that are unable to use molecular oxygen for energy yielding reactions
What are aerotolerant anerobes
Cannot use oxygen for growth but they tolerate it well.
What are microaerophiles
Microbes that are aerobic however they only grow in oxygen concentrations lower than those and air
What are organic growth factors
Essential organic compounds an organism is unable to synthesize
What are biofilms
Sticky slime layers of bacteria
What is a culture medium
The nutrient material prepared for the growth of microorganisms in the laboratory
What does sterile Mean
Must initially contain no living microorganisms
What is a chemically defined medium
One who’s exact chemical composition is known
What is complex media
The exact chemical composition very slightly from batch to batch
What is nutrient broth
Liquid form of a medium
What is nutrient agar
Agar added to a nutrient broth
What is reducing media
Ingredients chemically combined with dissolved oxygen and deplete the oxygen in the culture medium
What are capnofiles
Microbes that grow better at high CO2 concentrations
What are selective media
Media designed to suppress the growth of unwanted bacteria and encourage the growth of the desired microbes
What is differential media
Makes it easier to distinguish colonies of the desired organism from other colonies growing on the same plate
What is enrichment culture
Provide to do trades environmental conditions that favor of the growth of a particular micro but not others.
What is a colony
Bunches of microbes that arise from a single store or from a group of the same organisms attached to one another in groups of chains
What is the streak plate method
Streak bacteria in 4 quadrants
What is deep freezing
Pure culture of microbes is placed it is suspected liquid quick frozen temperatures ranging from -50 to -95
What is lyophilization
A suspension of microbes is quickly frozen water is removed by high vacume
How do bacteria reproduce
Binary fission or budding
What is the generation time
Time required for a cell to divide and it’s population to double
What is a bacterial growth curve
Shows the growth of cells overtime.
What are the four basic phases of growth
The lag, the log, stationary and death phase
What is the lag phase
Little to no cell division
What is the log phase
Period of exponential growth
What is the stationary phase
Period Of equilibrium
What is the death phase
Please continues until the population is diminished to a tiny fraction of the number of cells in the previous phase
What is a plate count
Where you count the visible colonies on a plate
What is colony forming units
What plate counts are reflected as
What is serial dilution
What do you dilute it to several different bottles
What is the pour plate method
When you mix broth with agar
What is the spread plate method
When you spread of bacteria over the surface
What is turbidity
Cloudiness from cells
What is sterilization
Removal or destruction of all living microorganisms
What is a sterilant
Sterilizing agent
What is commercial sterilization
Sterilization of food items
What is disinfection
Control directed at destroyed harmful microorganisms
What is antisepsis
The antiseptic disinfection of living tissue
What is Degerming
Mechanical removal of most of the microbes that a limited area
What is sanitization
Lowers microbial count to safe public health levels
What does a germicide kill
Microbes
What does a fungicide kill
Fungi
What is bacteriostasis
Stops bacteria. Once the bacteriostatic agent is removed growth might resume
What is sepsis
Decay
What factors influence the effectiveness of antimicrobial treatments
The number of microbes, environmental influences, type of exposure, microbial characteristics
How do microbial control agents kill cells
Alteration of membrane permeability, damage to proteins and nucleic acid
What is the thermal death point
Lowest temperature at which all the micro organisms in a particular liquid suspension will be killed in 10 minutes
What is the thermal death time
Minimal length of time for all bacteria in a particular liquid culture to be killed at a given temperature
What is decimal reduction time
Time in minutes in which 90% of the population of bacteria at a given temperature will be killed
Given example of moist heat sterilization
Autoclave
What is pasteurization
Eliminates pathogenic microbes and lowers microbial numbers
What are the methods of dry heat sterilization
Direct flaming, incineration, hot air sterilization. Kills by oxidation
What is filtration
Passage of liquid or gas through filter with pores small enough to retain microbes
What do high efficiency particulate air filters do
Remove all Microorganisms larger than a certain diameter
What are membrane filters used for
Intended to filter bacteria
What is desiccation
In the absence of water organisms cannot grow or reproduce but can remain viable for years and one water is made available to them they can resume their growth and division.
How is osmotic pressure used to preserve foods
The use of high concentration of salt and sugar is based off the effects of osmotic pressure. The process resembles desiccation
What are the two types of sterilizing radiation
Ionizing and nonionizing
What is ionizing radiation
Short wavelength. More energy
What is non-ionizing radiation
Long wavelength.
What are the three heat methods used to control microbial growth
Moist heat, Pasteurization, dry heat
In boiling what is the mechanism of action for controlling microbial growth
Protein denaturation
In autoclaving what is the mechanism of action to control microbial growth
Protein denaturation
In pasteurization what is the mechanism of action to control microbial growth
Protein denaturation
In dry heat hot air sterilization what is the mechanism of action for control of microbial growth
Oxidation
In filtration what is the mechanism of action to control microbial growth
Separation of bacteria from liquid
In cold refrigeration what is the mechanism of action to control microbial growth
Decrease the chemical reactions and possible changes in proteins
In deep-freeze and what is the mechanism of action to control microbial growth
Decreased chemical reactions and possible changes and proteins
In high-pressure what is the mechanism of action to control microbial growth
Alteration of molecular structure of proteins and carbohydrates
In desiccation what is the mechanism of action used to control microbial growth
Disruption of metabolism
In osmotic pressure what is the mechanism of action used to control microbial growth
Plasmolysis
In radiation what is the mechanism of action used to control microbial growth
Destruction of DNA.
What is the disc diffusion method
Place disks on the lawn of bacteria to see which it is affected by
What is the mechanism of action for phenol chemicals
Disruption of plasma membrane and denaturation of enzymes
What is the mechanism of action for chlorhexidine to control microbial growth
Disruption of plasma membrane
What is the mechanism of action for halogens
Inhibits protein function
What is the mechanism of action for alcohols
Protein denaturation and lipid dissolution
What is the. Mechanism of action for heavy metals and their compounds
Denaturation of enzymes and other proteins
What is the method of action for surface active agents
Enzyme disruption
What is the mechanism of action for chemical food preservatives
Metabolic inhibition
What is the condition of action for aldehydes
Protein denaturation
What is an antibiotic
A substance produced by micro organisms that in small amounts inhibits other microorganisms
What does the narrow spectrum of microbial activity mean
The range of different microbial types it affects