M3: Gene & Chromosomal Mutations Flashcards
Alteration in the DNA sequence
Any base-pair change in the DNA MOLECULE
Gene Mutation
Basis of Classifying Gene Mutation
- Cause
- Location
- Molecular Change
- Phenotypic Effects
Types of Mutations Based on Cause
- Spontaneous
- Induced
Based on Cause
Results from the occasional errors during DNA Replication
*Very low mutation rate
*Occurs without external intervention
Spontaneous
Based on Cause
Using Mutagens (Biological-Transposons, Chemical-Base analogs, & Physical-UV Radiation)
*Induced by humans
*High mutation rate
Induced
Types of Mutations Based on Location
- Somatic
- Germ Line
- Autosomal
- Sex Chromosome
- Coding Regions
- Non-coding Regions
Based on Location
May result to altered cellular functions of the tumor
*Not heritable
*Ex: Non-reproductive Cells
Somatic Mutation
Based on Location
Heritable
Ex: Reproductive Cells
Germ Line Mutation
Based on Location
Mutations within genes located on the chromosomes not related to sex
Autosomal Mutation
Based on Location
Ex:
* X-linked mutation
* Y-linked mutation
Sex Chromosome Mutation
Based on Location
Regulatory sequences
Ex: Introns
Non-coding region of the gene
Based on Location
Ex: Exons
Coding Region of the Gene
How can DNA mutation can be fixed?
DNA Repair Mechanism
Existence of Gene Mutation
Permanent
Based on Cause
A possible source of spontaneous gene mutation
DNA Polymerase
Based on Location
An example of non-coding region for mutation
Cis-Acting Elements
Types of Mutation based on Molecular Change
- Frameshift
- Rearrangement
- Base Substitution
Based on Molecular Change
Point Mutation
Replacement of one base by another base
Base Substitution
Purine to Purine Substitution
Transition
Purine to Pyrimidine Substitution
Transversion
Effects of Base Substitution
- Silent Mutation
- Non-sense Mutation
- Missense Mutation
Base substitution effects
No effect on the resulting protein
Silent Mutation
Base Substition Effect
Results to a stop codon
Nonsense mutation
Base Substitution Effect
Results to a faulty protein
Missense Mutation
Addition or deletion of nucleotides
* Most prevalent at repeated sequence
* No effect if adds/deletes units
Frameshift
Types of Framshift
- Reading frame, +1
- Reading frame, -1
Deletion or Addition of large number of nucleotides
Rearrangement
Types of Rearrangement
- Large segment inserted
- Large segment deleted
Rearrangement Effect
Truncated protein
Large segment deleted
Rearrangement Effect
Proteins with partial or no activity
Large segment added
Types of Mutation based on Phenotypic Effects
- Loss of Function
- Null
- Visible
- Nutruitional Vitamin
- Biochemical
- Behavioral
- Regulatory
- Lethal
- Conditional
- Neutral
Mutation Type based on Phenotypic Effect
Reduce or eliminate the function of the gene product
Loss of function
Mutation Type based on Phenotypic Effect
Complete loss of function
Null
Mutation Type based on Phenotypic Effect
Altered morphological trait
Visible
Mutation type based on Phenotypic Effect
Inability to synthesize amino acid or vitamin
Vitamin
Mutation based on Phenotypic Effect
Altered metabolic activities
Biochemical
Mutation based on Phenotypic Effect
Altered behavior
Behavioral
Mutation based on Phenotypic Effect
Inaapropriately activate or deactivate gene expression
Regulatory
Mutation based on Phenotypic Effect
Affects survival
Lethal
Mutation based on Phenotypic Effect
Environment-dependent
Conditional
Mutation based on Phenotypic Effect
Negligible
Neutral
Passed to Offsping in a predictable manner
Chromosome abberation
Chromosome mutation
Two classes of Chromosome mutation
- Variation based on chromosome number
- Variation based on chromosome structire and arrangement
Variations in chromosome number
- Aneuploidy
- Euploidy
Organism gains or loses one or more chromosome
Imbalance in number of chromosome
Aneuploidy
Aneuploidy
Error in meiosis
* Paired homologs failed in segregation
* Disrupts normal distribution
Non-disjunction
Human conditions due to Aneuploidy
- Down syndrome
- Klinefelter syndrome
- Patau syndrome
- Turner syndrome
Human condition with Aneuploidy
Only condition that wereable to survive more than a year
47, 21+
Down Syndrome
Human condition with Aneuploidy
Male with female attributes
47, XXY
Klinefelter Syndrome
Human condition with Aneuploidy
Offspring with cleft lips
47, 13+
Patau Syndrome
Human condition with Aneuploidy
Female with male traits
45, X
Turner Syndrome
Presence of complete haploid set of chromosome
Euploidy
Well known in lizards, amphibians, fish, and plant species
Polyploidy
Chromosome are identical to normal haploid complacent of the same species
Addition of one or more extra set of chromosome
Autopolyploidy
Combination of chromosome sets from different species
Due to hybridization
Allopolyploidy
Allotetraploids that originate from from original species
Exihbit traits from both parents
Amphidiploid
Condition where certain cells are polyploid
Chromomsome replicate without nuclear division
Endopolyploidy
Variation in Chromosome Structure and Arrangement
- Insertion
- Deletion
- Inversion
- Translocation
Chromosome breaks in one or more place, and loses its portion
Defiency
Deletion
Types of Deletion
- Terminal
- Intercalary
Type of Deletion
Deletion occurs at one end of chromosome
Terminal Deletion
Type of Deletion
Deletion occurs within the chromosome
Intercalary
Sporadic loss of chromosomal material in gametes
* 46, XY, 5p-
* Segmental Deletion
Cri-du-chat Syndrome
Any part of the genetic material is present more than once in the genome
Duplication
Source of genetic variability during evolution
- Gene Redunduncy
- Phenotypic Variation
Duplication error in synapsed chromosome
Duplication error in meiosis
Duplication as replication error
Duplication error in mitosis
Segment of chromosome turned around 180 degrees
Break at two points and insertion
Inversion
Inversion
Inversion inculding centromere
Pericentric inversion
Inversion
Inversion not inculding centromere
Paracentric inversion
Movement of chromosomal segment to a new part of the genome
Occurs between non-homologous chromosomes
Translocation
Types of Translocation
Equal balance exchange
Reciprocal Translocation
Types of Translocation
Uneven Exchange
Non-reciprocal Translocation
Syndrome that affects more family members than expected
Familial Syndrome