M2: Chemical Basis of Heredity Flashcards
Characteristics of a Genetic Material
- Replication
- Storage of Information
- Variation by Mutation
Direct Proof that DNA is a Genetic Material
- Avery-Macleod-McCarty Experiment
- DNA causes a transformation in bacteria - Hershey-Chase Experiment
- DNA directs the reproduction of viruses
Indirect Proof that DNA is a Genetic Material
- Griffith’s Transforming Principle
- Recombinant DNA Technology
- Phage DNA-mediated infection
- DNA absorbance wavelength
- DNA found on organelles
Building blocks of DNA
2-deoxyribonucleotide
Building blocks of RNA
ribonucleotide
Bond between phosphate and pentose sugar
Phosphoester bond
Bond between base and pentose sugar
n-glycosidic bond
Difference between 2-deoxyribose and ribose
presence of -OH group in 2’ of pentose sugar in Ribose
Pyrimidine
Single rings like Thymine, Uracil and Cytosine
Purine
Double rings like Adenine and Guanine
Bond between 2 nucleotide
Phosphodiester bond
Basis of Watson and Crick DNA model
B DNA
Suggested that DNA is similar to a helix
X-ray Diffraction Data
Position of nitrogenous bases
Nitrogenous bases are planar, perpendicular to the axis, and stacked on one another
Diameter of DNA
20 A or 2.0 nm
Covalent bonds in DNA
bases and sugar (phosphodiester bond)
Hydrophobic bond in DNA
Stacked base pairs
Erwin Chargaff rule
A=T & C=G
DNA that is prevalent under high-salt or dehydration conditions
A-DNA
DNA with greater dehydration condition than A/B DNA
C-DNA
DNA occurring in helices lacking in guanine
D & E DNA
Artificially stretched DNA
P-DNA
Small synthetics DNA oligonucleotide with G-C pairings
Z-DNA
DNA organization in Eukaryotes
- DNA double helix (2 nm)
- Chromatin (11 nm)
- Chromatin fibre (30 nm)
- Extended Chromosome (300 nm)
- Condensed Chromosome (700 nm)
- Mitotic Chromosome (1400 nm)
*ideally, the measurements are familiarize
First level of packaging
DNA unwinding around histones
Nucleosome
Second level of packaging
six-fold compaction
Solenoid
First to observed Polytene chromosomes
E.G. Balbiani
Giant chromosomes formed during interphase found in fly larvaes, protozoans and plants
Polytene Chromosmes
Linear series of alternating bands and interbands
Paired homologs
Bands in Polytene Chromosomes
Visible manifestation of inidividual genes
Chromomeres
Visible manifestations of high level transcription
localized unwinding
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Puffs in Polytene Chromosomes
Resemble brushes that is observable in oocytes and spermatocyte
Occurs meiosis I at chismata
Lampbrush Chromosome
Process of inducing reversible changes in chromatin structure
Chromatin Remodeling
Opening of Chromatin
Histone Modification
Gene activation
Requires histone acetyltransferase
Acetylation
Gene repression
Requires methyltransferase
Methylation
Gene activation, cell cycle arrest, apoptosis, and damage repair
Requires kinase
Phosphorylation
DNA Organization in Bacteria
- Supercoiling
- Short surface area
- Devoid of Associated proteins
* May also include functionally inert after packaging
DNA structuring protein influence DNA compaction such as bridging, wrapping, and bending
Nucleoid-Associated Protein
Alternatives of Histone in Bacteria and Viruses
DNA Organization in Virus
- Supercoiling
- Active when released into a host cell
*Functionally inert as well after packaging
Prone to mutation
RNA virus