Lecture 11: Viruses and Tree of Life Flashcards

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1
Q

what is life?

A
  • organized

- able to replicate itself

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2
Q

virus structure

A
  • protein coat (capsid)
  • DNA or RNA
  • no cytosol
  • no plasma membrane
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3
Q

capsid/protein coat

A

-contains core that contains nucleotides

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4
Q

viral hereditary material

A
  • DNA or RNA but never both
  • circular or linear genetic material
  • single or double stranded
  • need a host cell in order to replicate
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5
Q

virions

A

-individual virus particles

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6
Q

helical shapes

A
  • circular, spherical

- plant and flu viruses (influenza)

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7
Q

icosahedral shapes

A
  • geometric solid

- maximizes internal capacity

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8
Q

binal

A

-have both icosahedral and helical shapes

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9
Q

basics of viral replication

A
  • virus enters cell
  • cell strips off virus outer coat of protein
  • nucleic acid in virus released
  • nucleic acid gets into cells chemical manufacturing system
  • cell switches to making new viruses
  • cell sometimes destroyed in the process
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10
Q

bacteriophage

A
  • very small

- virus that infects bacteria

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11
Q

why do some scientists argue that viruses are not alive? why do others disagree?

A
  • bc they need a host to replicate, they’re not traditional cells
  • others bc they are highly organized, they have the same kind of genetic storage as living things, they figured out how to replicate, they mutate, and evolve (even evolved from LIVING things)
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12
Q

TSE

A
  • aka transmissible spongiform encephalopathies
  • virus that causes cavities in the brain
  • can get it from being injected with infected tissues, transplant of infected tissues, or eating infected tissue
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13
Q

TSE examples

A

-types: scrapie, bovine spongiform encephalopathies (mad cow disease), chronic wasting disease, creutafeldt-jakob disease

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14
Q

prions

A
  • prions don’t contain DNA (we know this b/c we hit them with radiation that would kill DNA but they’re fine)
  • they’re misfolded protein
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15
Q

why were prions originally called slow viruses?

A

-the time between infection and detection is very long

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16
Q

prion “replication”

A

-misfolded prion protein touches normal protein and makes it misfolded

17
Q

how is the traditional (5 or 6 kingdom) view of the tree of life biased?

A
  • protists are actually paraphyletic and the traditional tree makes it look like all groups are equal in size
  • archaea and bacteria are actually very different than the rest
18
Q

three domain model

A
  • Bacteria, Archaea, Eukarya
  • better bc it shows complexity more
  • might soon change to 2 domain model though
19
Q

LUCA

A
  • Last Universal Common Ancestor

- all life shares some traits, indicating existence of LUCA

20
Q

traits shared by all life forms

A
  • have plasma membrane bound cells and ribosomes
  • semi-conservative DNA replication
  • use DNA to encode proteins
  • use same genetic codes to produce proteins
  • do transcription/translation
  • metabolize through similar pathways
21
Q

key traits common to bacteria and archaea

A
  • unicellular
  • binary fission
  • unenclosed DNA
  • circular chromosomes
  • no organelles
  • asexual
22
Q

defining traits of Eukaryotes

A
  • multi-cellular
  • compartmentalized
  • sexual (mostly)
23
Q

how is the new eukaryotic tree different from older views?

A

-includes protists (eukaryotes that aren’t plants, animals, or fungi)