Infectious Diseases Flashcards
Mechanisms of resistance
Antibiotic inactivation
- Beta lactamases
- Pneumococcus and macrolides
- Enzymatic modification of aminoglycosides
Alteration of antibiotic target
- Pneumococcus and penicillin
- Staph aureus and methicillin like antibiotics
Decreased uptake
- Reduced penetration
- Antibiotic effluc
MRSA mechanism of resistance
Penicillin-binding protein mutation coded by the mecA gene on a transposon
MRSA treatment
Vancomycin
Teicoplanin
Rifampicin
Fusidic acid
Ciprofloxacin
Clindamycin
VISA mechanism of resistance
Genes code for factors such as additional peptidoglycan synthesis and reduced need for peptidoglycan cross-linking
VISA management
Teicoplanin
Linezolid
Quinupristin-dalforpristin
Cotrimoxazole
VRE pathogens
E faecium
E faecalis
VRE mechanism of resistance
- penicillin-binding protein mutations
- beta-lactamase production
- aminoglycoside-modifying enzymes
- antibiotic drug efflux pumps
- alterations in cell wall components coded by transposons (Van A to F phenotypes)
Treatment of VRE
Teicoplanin
Linezolid
Daptomycin
Tigecycline
Van A: resistant to vancomycin and teicoplanin
Van B: resistant to vancomycin, teicoplanin may be effective but resistance likely to emerge with prolonged use (use linezolid, tigecycline, dalfopristin-quinapristin, daptomycin)
Van C: partly resistant to vancomycin
ESCAPPM organisms
Enterobacter species
Serratia species
Citrobacter freundi
Aeromonas
Proteus vulgaris (non-mirabilus) + Pseudomonas
Providencia
Morganella morganii
ESCAPPM resistance and mechanism
Resistance to cephalosporins (especially third generation) due to overexpression of induceable chromosomal AmpC/β-lactamase enzymes.
Treatment of ESCAPPM
Carbapenems
Fourth generation cephalosporins
Ciprofloxacin
Aminoglycosides
Mechanism of penicillin resistance in staph aureus
- Production of beta-lactamase, conferred by the gene blaZ - inactivates penicillin by hydrolyzing the beta-lactam ring
- Altered penicillin-binding protein, PBP2a, encoded by mecA
Classes of beta lactamase enzymes
A - penicillinases (TEM, SHV, CTX-M)
B - metalloenzymes (NDM, VIM, IMP)
C - cephalosporinases (AmpC)
D - oxacillinases (OSA)
ESBL mechanism of resistance
Arise by
- mutations in old beta lactamase genes (i.e. TEM, SHV)
- Plasmid mediated transfer
ESBL organisms
Klebsiella
E coli
Salmonella
Proteus
Enterobacter
Citrobacter
Serratia
Pseudomonas
Treatment of ESBL
Carbapenems
Colistin
Amikacin
Ciprofloxcin
Metallo betalactamases organisms
Pseudomonas
Acinetobacter
Metallo betalactamases mechanism of resistnace
New Delhi metallo-Clactamase 1 (NDM-1) - an enzyme that produces resistance to a broad-range of beta-lactam antibiotics
produces a carbapenemase
Treatment of metallo-beta-lactamases
Tigecycline
Colistin
Linezolid mechanism
Activity against gram positive (+ mycobacteria, nocardia spp.)
Inhibits protein synthesis
Side effects of linezolid
GI upset
Cytopenias
Neuropathy
MAO inhibition (avoid SSRIs, tramadol, pethidine)
Daptomycin mechanism
Cyclic lipopeptide
Binds to cell membrane and leads to inhibition of synthesis of DNA, RNA and protein
Bactericidal activity against most gram positive
Tigecycline mechanism
Protein synthesis inhibitor
Bacteriostatic
Tigecycline targets
MRSA, MSSA, VISA, VRE - low MICs required
Active against gram negatives (except pseudomonas)
Ceftaroline/ceftobirole mechanism and targets
Novel cephalosporins
Active against MRSA
Not good for VRE
Colistin mechanism
Binds lipopolysaccharides and phospholipids in outer cell membrane
Leads to disruption of outer cell membrane, leakage and cell death
Colistin targets
Pseudomonas
Acinetobacter
E Coli
Enterobacter spp
Klebsiella
Salmonella
Stenotrophomonas
Fosfomycin mechanism
Inhibits MurA enzyme and bacterial cell wall biogenesis
Bactericidal
Fosfomycin targets
Targets gram -ve and +ve resistant cystitis UTIs
Not pseudomonas or morganella
Cefiderocol mechanism
Siderophore cephalosporin that binds to iron
Actively transported into bacterial cells
Cefiderol targets
Multi-resistant gram negatives
ESBL
Pseudomonas
Acinetobacter
Stenotrophomonas
Burkholderia
Prophylaxis for C-section, H&N, thoracic, neck, ortho
1st line - cefazolin 2g
2nd - vancomycin 25mg/kg
Prophylaxis for colorectal surgery, biliary, hysterectomy, major ENT, infrarenal vascular surgery
1st line - cefazolin + metronidazole
2nd line - vanc + gent
Prophylaxis for amputation
1st line - benzylpenicillin
2nd - metronidazole
Prophylaxis for ERCP
1st line - gentamycin
2nd line - cefazolin
Indications for dental prophylaxis
Mechanical valve
Prior IE
Congenital heart disease
Rheumatic heart disease
Heart transplant
Standard therapy for TB
2 weeks of isoniazid, rifampicin, ethambutol, pyridazinamide
4 weeks of isoniazid and rifampicin
Greatest risk of reactivating TB
HIV
Growing resistance to which antimicrobial in TB
Isoniazid > Rifampicin
Features of paradoxical reactions in TB
Clinical or radiological deterioration of pre-existing lesions or appearance of new lesions whilst on therapy
Presents with fever, nodes, respiratory failure, neuro deterioration, sinus formation
Treatment of paradoxical reactions in TB
Corticosteroids
Aspiration of pus
Excision
Continue anti-TB therapy
Mechanism of action of quantiferon gold assay
Exposes whole blood to TB antigens
Sensitised lymphocytes release measurable cytokines in response
Unable to differentiate latent vs active TB
Features of nodular bronchiectasis
Presents in elderly women with chronic suppressed cough
Affects RML and lingular segment
Features of fibronodular bronchiectasis
Middle-aged, male smokers/drinks
Presents with productive cough positive with MAC
Antibiotic guidelines of CAP
Mild CAP - doxycycline or amoxicillin (or clarithromycin)
Moderate CAP - Benzylpenicillin + doxycycline
Severe CAP - ceftriaxone + azithromycin
Indications to treat aspiration pneumonia with metronidazole
Terrible gums, foul smelling sputum
Severe EtOH abuse
Lung abscess with fluid level
Empyema or complete white out
Mechanisms of oseltamivir
Neuraminidase inhibitor
Reduces duration of flu symptoms by 1-2 days
More effective for Flu A than Flu B
Causes of avian influenza
Bird exposure
Features of pertussis
Incubation period: 1-4 weeks
Catarrhal phase (1-2 weeks) - non specific URTI features
Paroxysmal phase (2-6 weeks) - intense paroxysmal coughing
Convalescent phase - progressive reduction in symptoms
K1 Klebsiella pneumoniae features
Novel strain associated with community acquired liver abscesses, bacteraemia and endophthalmitis
More common in diabetes
Susceptible to ceftriaxone (unless ESBL)
Indications for surgery in endocarditis
Absolute
- Severe AR or MR
- Cardiac failure (related to valve dysfunction)
- Fungal or highly resistant organisms
- Perivalvular abscess or fistula
- Prosthetic valve endocarditis
Relative
- Multiple or severe embolism
- Uncontrolled infection (e.g. MSSA, pseudomonas, Q fever)
- Size of vegetation
Necrotising fasciitis bacteria and treatment
Usually group A strep, may be polymicrobial in diabetes
Treatment with penicillin, clindamycin, pip/taz +/- gent +/- IVIG
Surgery
Mycobacterium ulcerans features
From Bairnsdale, Phillip Island, Point Lonsdale, Daintree
Treatment with rifampicin + clarithromycin (or moxifloxacin)
Neisseria gonorrhoeae triad
Tenosynovitis, dermatitis and polyarthralgias without purulent arthritis
Features of Bartonella
Cat scratch disease - B. henselae and B. quintana
Cutaneous lesion at bite site after 3-10 days
Resolves in 1-4 months, sometimes longer
May have ocular features, encephalopathy, radiculitis, myelitis, cerebellar ataxia, granulomatous hepatitis or splenitis, or bone lesions
Types of tick-borne rickettsial infections
R. australias - Australian tick typhus
R. honei - Flinders Island spotted fever
R. rickettsi - Rocky Mountain SF
R. africae - African tick bite fever
Treatment for Rickettsia
Doxycycline
Anthrax features
Bacillus anthracis - gram positive spore forming bacterium
Clinical syndromes
- Inhalation
- Cutaneous
- GI
Features of Inhalational anthrax
Flu-like symptoms for two days
Sudden deterioration - severe SOB and hypoxia
Haemorrhagic mediastinum
Can cause pleural effusion, meningitis, low BP
Plague features
Yersinia pestis (enterobacteriae)
Reservoir - rats, gerbils, prairie dogs, other rodents
Transmission via infected fleas
Types
- Bubonic
- Pneumonia (primary or secondary)
- Septicaemic
- Meningitis, pharyngitis
Treatment with streptomycin, doxycycline, ciprofloxacin
Features of tularaemia
Francisella tularensis
Incubation 2-10 days
Sudden onset fever, chills
Headache
Malaise
Treatment with streptomycin, tetracycline or chloramphenicol
Features of botulism
Toxins A, B and E
Binds to pre-synaptic nerves to prevent release of acetyl choline
Affects CN than symmetrically descends
No sympathetic or sensory involvement
Food history
EMG
Supportive treatment +/- antitoxin or penicillin
Infections to suspect with red eyes
Leptospirosis
Measles
Dengue
Kawasaki
Adenovirus
Stevens-Johnson
Causes of nodular lymphangitis
Sporotrichosis (Sporothrix schenckii)
Nocardia spp
Mycobacterium marinum
Leishmania braziliensis
Francisella tularensis
Features of Whipples disease
Tropheryma whipplei, an intracellular gram-positive bacteria
Abdominal pain, intestinal malabsorption
Enteropathic arthritis
Cardiac symptoms
Neurological symptoms i.e. myoclonus, ataxia, oculomotor impairment
Vancomycin targets
Most gram positive