HumBio3A-Notes3 Flashcards

1
Q

Why ATP

A

versatile currenty of energy that all cells can use

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Enzymes

A

marvelous cellular tools that extract energy from nutrients and deploy it for the work cells need to do

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

How do Enzymes work?

A

active sites, reaction mechanisms, vitamins and co-factors

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is catalysis?

A

When an enzyme is used to lower the activiation barrier for a specific reaction

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Analogy for metabolic pathways

A

decision tree

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

metabolic pathways

A

chain of reactions that guide series of enzyem reactions

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Are enzymes in a metabolic pathway often found in close proximity?

A

yes, this aids efficiency. It’s very common for them to cluster

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

3 ways that enzyems encourage reactions

A

enzyme binds two substrates, binding to substrate rearranges electrons to favor reactions, enzyme cleaves or strains the bound of the substrate, forcing toward a transition

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

How do enzymes maintain specificity?

A

The key is in the form or structure

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What is a ligand?

A

anything that an enzyme bonds to

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

two meanings of ligand

A

something that binds to an enzyme (substrate), or something that binds to a signaling receptor

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Can enzymes be recycled?

A

yes! Once the reaction is complete, the enzyme persists, unchanged

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

enzyme substrate complex changes to the ________

A

enzyme product complex

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

How does lysozme work?

A

it cleaves/cuts a polysaccharide at a specific covalent bond

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Are enzymes static?

A

no, substrate binding causes conformational change (ex. Bacterial hexokinase)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Can a substrate alter an enzyme?

A

Yes! A substrate binding can change the form/structure of the enzyme and assist in reactions or exclusion

17
Q

Is an enzyme the only element required for these reactions?

A

No, there are often cofactors that can assist or be required for the reaction. Vitamins and other environmental minerals can be required

18
Q

What’s a competitive inhibitor?

A

a molecule that resembles a substrate, and subsequently excludes substrate from binding site.

19
Q

What is malonate?

A

an inhibitor that prevents succinate from binding to succinate dehydrogenase, preventing conversion to fumarate during glucose metabolism

20
Q

Why does methanol kill us?

A

Alcohol dehydrogenase , which would normally convert ethanol to Acetaldehyde, converts the methanol to formyldehyde

21
Q

What is negative regulation?

A

when a resultant protein actually inhibits a predecessor enzyme and stops the metabolic pathway

22
Q

Allosteric regulation

A

the enzyme has two binding sites, one for the substrate, and another for regulatory inhibition - TWO BINDING SITES!!