Chapter Seven: Mutations Flashcards

1
Q

heritable changes in the base pair sequence of DNA

A

mutations

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2
Q

changes wild-type allele to a different allele

A

forward mutation

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3
Q

changes a mutant allele back to wild-type

A

reverse mutation (reversion)

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4
Q

replacement of a base by another base

A

substitution

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5
Q

purine replaced by another purine or pyrimidine replaced by another pyrimidine

A

transition

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6
Q

purine replaced by a pyrimidine

A

transversion

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7
Q

block of one or more base pairs lost from DNA

A

deletion

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8
Q

block of one or more base pairs added to DNA

A

insertion

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9
Q

when both insertion and deletion occur

A

indel

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10
Q

affect one or a few base pairs, altering one gene at a time

A

point mutations

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11
Q

four examples of a point mutation

A

transitions, transversions, small deletions, small insertions

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12
Q

spontaneous mutations occur at a ___

A

very low rate

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13
Q

different ___ have different mutation rates

A

genes

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14
Q

mutation rates depend on ___ and ___

A

gene size and susceptibility of a gene to mutagens

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15
Q

bigger genes are ___ likely to have mutations

A

more

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16
Q

average mutation rate in gamete-producing eukaryotes is ___ than that of prokaryotes

A

higher

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17
Q

why is the mutation rate higher in gamete-producing eukaryotes

A

many cell divisions take place between zygote formation and meiosis and germ cells, more chances to accumulate mutations

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18
Q

human sperm have a ___ mutation rate them human eggs

A

higher

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19
Q

human mutation rate

A

1x10^-8

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20
Q

human mutation rate is estimated by ___

A

sequencing genomes of parents and their children

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21
Q

most mutations do not influence ___

A

phenotype

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22
Q

sperm mutation rate

A

2^-4x10^-8

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23
Q

revertants are more ___ than forward mutations

A

rare

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24
Q

many mutations ___ gene function, only a few ___ gene function

A

disrupt
restore

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25
fluctuation test provided evidence that ___
mutations in bacteria occur spontaneously
26
two hypotheses for the origin of bacterial resistance in the fluctuation test
1. resistance is a physiological response to bactericide 2. resistance arises from random mutation
27
___ verifies that bacterial resistance is the result of preexisting mutations
replica plating
28
bacterial resistance arises from mutations that occurred ___ exposure to bactericide. bactericide becomes a ___.
before selective agent
29
once random mutations occur they usually ___
remain stable
30
base changes are often corrected by ___
DNA repair
31
if a base change does not get corrected before replication, ___
both DNA strands contain the base change and a heritable mutation occurs
32
hydrolysis of a purine base, loss of a purine
depurination
33
removal of an amino group
deamination
34
deamination can change a ___ to a ___
C to a U
35
cosmic rays and x-rays cause DNA damage by ___
breaking the sugar phosphate backbone
36
causes adjacent thymines to form abnormal covalent bonds (thymine dimers)
Ultraviolet rays
37
___ decreases mistakes during replication
proofreading
38
incorporation of incorrect bases by DNA polymerase is __
exceedingly rare
39
proofreading portion of DNA polymerase that recognizes and excises mismatches
3' to 5' exonuclease
40
base tautomerization results in ___
replication mistakes
41
each base has two ___
tautomers
42
addition of 3 nucleotides
expansion
43
deletion of 3 nucleotides
contraction
44
___ and ___ are caused by unstable trinucleotide repeats
fragile X syndrome and Huntington disease
45
expansion and contraction of triplet repeats occurs by ___
slipped mispairing
46
HJ Muller used x-ray dose to ___ in Drosophila
increase mutation rate
47
agents that raise frequency of mutations above spontaneous rate
mutagens
48
chemical structure almost identical to normal base
base analog
49
addition of an OH group
hydroxylation
50
addition of ethyl or methyl groups
alkylation
51
removal of an amine group
deamination
52
insert molecules in between bases
intercalators
53
mutations that occur in non-germ cells
somatic mutations
54
are somatic mutations heritable
no
55
test used to screen for chemicals that cause mutations and therefore might cause cancer
Ames test
56
four accurate DNA repair mechanisms
1. reversal of DNA base alterations 2. homology-dependent repaid of damaged bases or nucleotides 3. double-strand break repair 4. mismatch repair of DNA replication errors
57
two error prone DNA repair systems
1. SOS system 2. microhomology mediated end joining (MMEJ)
58
base excision repair mechanism
1. DNA glycosylases remove altered base 2. AP endonuclease cuts backbone 3. DNA exonuclease removes nucleotides near the cut, creating a gap 4. DNA polymerase synthesizes new DNA to fill the gap 5. DNA ligase seals the cut
59
nucleotide excision repair mechanism
1. UvrA and UvrB scan for distortions to the double helix (thymine dimers for example) 2. UvrB and UvrC endonuclease cut strand containing the distortion 3. damaged fragment is released from DNA 4. DNA polymerase fills in the gap with new DNA 5. DNA ligase seals the cut
60
unrepaired double-strand breaks can lead to ___ and ___
deletions and chromosome rearrangements
61
two repair mechanisms for double-strand breaks
homologous recombination and nonhomologous end-joining
62
in bacteria, ___ corrects mistakes in replication
methyl-directed mismatch repair
63
the SOS system in bacteria is used at ___
replication forks that stalled because of unrepaired DNA damage
64
in the SOS system, DNA polymerase adds ___ opposite damaged bases
random nucleotides
65
xeroderma pigmentosa is caused by ___
mutations in any one of seven genes involved in nucleotide excision repair
66
hereditary forms of colorectal cancer are caused by ___
mutations in mismatch repair genes
67
hereditary forms of breast cancer are caused by ___
BRCA 1 and BRCA 2 involved in double - strand break repair by homologous recombination
68
without ___, life would have died out long ago because it could not have responded to changes int he environment
mutations
69
DNA repair walks a fine line between
being efficient enough to protect genomes and propagation of life