Chapter 17 (Genetic Info Flow) Flashcards

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1
Q

How is info stored in DNA?

A

nucleotide sequences

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2
Q

How do nucleotide sequences lead to specific traits?

A

directing protein synthesis

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3
Q

What do the proteins created by nucleotide sequences link together?

A

phenotype and genotype

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4
Q

What is a gene?

A

unit of inheritance, region of the chromosome, and nucleotide sequence that will specify the creation of proteins or sequence of RNA

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5
Q

What is gene expression?

A

a process where DNA directs protein synthesis

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6
Q

What are the stages of gene expression?

A

transcription and translation

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7
Q

What is transcription?

A

the process by which the information in a strand of DNA is copied into a new molecule of messenger RNA in the nucleus

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8
Q

What does transcription produce?

A

raw RNA product called pre-mRNA (messenger)

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9
Q

How are RNA transcripts modified?

A

RNA processing creates mature messenger RNA

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10
Q

What is translation?

A

process in which ribosomes in the cytoplasm or endoplasmic reticulum synthesize proteins after the process of transcription of DNA to RNA in the cell’s nucleus

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11
Q

What separates the process of transcription and translation?

A

nuclear envelope

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12
Q

What are the nucleotides found in DNA?

A

adenine, guanine, thymine, cytosine

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13
Q

What are the nucleotides encoding?

A

amino acids

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14
Q

What’s the triplet code?

A

series of non-overlapping, three-nucleotide “words” that have 64 different combos

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15
Q

What is a codon?

A

the sequence of three nucleotides that form a unit of genetic code

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16
Q

Out of the 64 different combos of three nucleotides, how many codes for amino acids?

A

61

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17
Q

What do the remaining combos of codons represent?

A

stop codons

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18
Q

What is the start codon?

A

AUG

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19
Q

Even though there are 64 different combos of codons, why is there only production of 20 amino acids?

A

redundancy and non-ambiguity since multiple combos of codons can give you 1 amino acid

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20
Q

Is the genetic code universal?

A

yes, so that means you can give different genes to different organisms

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21
Q

What happens during transcription?

A

1 strand of DNA (template/non-coding strand) and makes complementary mRNA strand by replacing T with U

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22
Q

What happens during translation?

A

reading from 3’ to 5’ in a reading frame that is 5’ to 3’, each codon generates 1 amino acid and multiple amino acids make a protein

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23
Q

What is the first step in DNA replication?

A

helicase separates/unwinds double helix and separates strands to create semi-conservative template strands

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24
Q

What does helicase create?

A

a replication fork

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25
Q

What is the second step of DNA replication?

A

single-strand binding protein stabilizes the single strands of DNA by preventing the bending

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26
Q

What is the third step in DNA replication?

A

RNA primase places RNA primer segments that allow DNA polymerase to attach to

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27
Q

What is the fourth step in DNA replication?

A

DNA pol III connects to primer and adds complementary bases

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28
Q

DNA is read in what direction?

A

3’ to 5’

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29
Q

What is the fifth step of DNA replication?

A

DNA pol. I remove primers on lagging strands

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30
Q

What is the sixth step of DNA replication?

A

DNA pol. I add base pairs to lagging strands and DNA ligase joins Okazaki fragments

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31
Q

What are the steps to transcription?

A

initiation, elongation, termination

32
Q

Where does transcription happen?

A

nucleus

33
Q

What does RNA polymerase II do?

A

creates pre-mRNA

34
Q

What are transcription factors?

A

proteins bind to different sequences of DNA and are named TF#

35
Q

What is a transcription unit?

A

the stretch of DNA that is being described

36
Q

What is the promotor region?

A

DNA sequence where RNA polymerase attaches

37
Q

What is the TATA (thiamine adenine) box and where is it found?

A

type of DNA promoter sequence, which specifies to other molecules where transcription begins

38
Q

What is the first step of initiation of transcription?

A

transcription factors bind to promoter regions (TATA box) on double-stranded DNA to form the initiation complex

39
Q

What is the second step of initiation of transcription?

A

the initiation complex attracts RNA polymerase II and RNA polymerase unzips DNA strand to form a replication bubble

40
Q

What is the coding region?

A

after the promotor region, the part of DNA that will be transcribed into RNA

41
Q

What are activator and repressor and enhancer regions?

A

before the promotor regions that control the level of transcription and expression

42
Q

What happens in the elongation phase of transcription?

A

extension of transcript

43
Q

What is the first and only step in elongation in transcription?

A

RNA polymerase produces a transcript of RNA bases on the DNA template strand (aka the antisense strand, - strand)

44
Q

What happens in the termination phase of transcription?

A

the RNA polymerase meets the termination sequence and detaches, creation of pre mRNA

45
Q

Is there proofreading happening in transcription?

A

no

46
Q

What happens in between transcription and translation?

A

processing of pre-mRNA

47
Q

Where does the processing of pre-mRNA happen?

A

the nucleus

48
Q

What are the steps of mRNA processing?

A

splicing, 5’ cap, poly A tail

49
Q

What happens in splicing?

A

separation of exons (exit the nucleus, will be preserved and EXpressed) and introns (won’t be carried over to protein synthesis leading to a formation of a splicosome

50
Q

What are introns?

A

noncoding regions

51
Q

What are exons?

A

regions of sequence that are expressed (called domain)

52
Q

What are spliceosomes?

A

the complex of short nucleoribonuleoproteins (snRNP) that lassos the introns and joins exons together in different orders (ex: exon 1 with exon 3)

53
Q

What happens in the 5’ cap?

A

the sequence of biomolecules that prevents degradation

54
Q

What happens in the poly-A tail addition?

A

added to 3’ end that prevents degradation, sequence of adenines

55
Q

What are ribozymes?

A

non-proteins that cut the lasso of a splicosome and physically splice the RNA

56
Q

Why are introns important?

A

controls where genes are translated and results in the process where multiple genes codes for 1 protein

57
Q

What are the components involved in translation?

A

Ribosome that has 2 subunits (small and big) and tRNA

58
Q

What happens in the first step of initiation in translation?

A

small subunit joins 5’ end to look for start codon (AUG)

59
Q

What happens in the second step of initiation in translation?

A

large subunit joins small subunit, tRNA encodes MET amino acid

60
Q

In ribosome, what does the P site do?

A
in the middle, holds the tRNA that carries the growing 
polypeptide chain (pass peptide site)
61
Q

In ribosome, what does the A site do?

A

holds the tRNA that carries the next amino acid

to be added to the chain (arriving site)

62
Q

In ribosome, what does the E site do?

A

tRNAs leave the ribosome (exit)

63
Q

What are the steps of translation?

A

initiation, translation, termination

64
Q

What is the first step in elongation for translation?

A

tRNA binds to next site that arrives at A site and binds with anticodon

65
Q

What is the second step in elongation for translation?

A

passing peptide from A site to P site

66
Q

What is the third step in elongation for translation

A

tRNA moves to P site with the amino acids attached to make polypeptide chain until termination

67
Q

What happens in the termination of translation?

A

translation of mRNA hits a stop codon and DO NOT have a tRNA, the release factor occupies the A site to release polypeptide chain while ribosome separates

68
Q

What does the release factor add?

A

water

69
Q

What is wobble base pairing?

A

3rd position of the nucleotide has flexibility in pairing, happens in translation (5’ to 3’)

70
Q

What is spontaneous in DNA?

A

replication, recombination, repair

71
Q

What are mutagens?

A

physical or chemical agents that cause mutations

72
Q

What are point mutations?

A

single base pair mutations

73
Q

What are the types of point mutations?

A

substitution, deletion, and insertion

74
Q

What happens in substitution?

A

Replaces one nucleotide in either stand to make a silent mutation, nonsense mutation, missense mutation

75
Q

What happens in insertions and deletions?

A

Additions or losses of nucleotide

pairs in a gene that can have a disastrous effect on a protein and not be able to have a sequence divisible by 3