Ch. 10 Classification of Microorganisms Flashcards
taxonomy
the science of classifying organisms
taxon
category
systematics
phylogeny (evolutionary links between species)
insert card here for
table 10.1
taxonomic hierarchy
grouping species in increasingly general groups.
Domain -> Kingdom (eukarya only) -> Phylum -> Class -> Order (-ales) -> Family (-ace) -> Genus -> Species
taxonomy mnemonic
dear king philip, come over for good spaghetti
are viruses classified?
yes! though they are not considered living, viral species are classified by their physical characteristics.
classification methods
1) staining
2) biochemical tests
3) serology
4) phage typing
5) fatty acid profiles
6) molecular biology
staining indicates…
- morphology (rod, cocci, vibrio)
- differential stains (e.g. gram stain)
- special stain (capsule, endospore, flagellum, acid-fast stain)
biochemical tests
- can organisms ferment lactos?
- are they facultative anaerobes?
- use a key to figure out the organism
- usually noted by a colour change
enteropluri tube
able to do multiple biochemical tests at the same time
serology
tests antigen-antibody interactions
- identifies proteins (all bacteria) and tychoic acids (gram-positive)
phage typing
- bacteria are colonized on Petri dishes
- drops of different phages on a grid pattern;
- if plaque grows = all bacteria are killed
fatty acid profiles
FAME - cellular or outer membrane
molecular biology
1) sequences of bases in DNA (DNA microarray)
2) fluorescent rxns with base pairs of oligoneucleotides (FISH)