Transcription Stuff Flashcards

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1
Q

What enzyme performs RNA synthesis?

A

RNA polymerase

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2
Q

What is the DNA strand that isn’t duplicated called?

A

The coding strand (non-template strand)

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3
Q

Does RNA polymerase need a primer to begin transcription?

A

No lol

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4
Q

What’s the protein subunit needed to initiate transcription in prokaryotes?

A

Sigma (lol)

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5
Q

What is the RNA polymerase holoenzyme?

A

Core RNA polymerase + sigma

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6
Q

What does sigma do?

A

Guides RNA polymerase to a promoter sequence on the DNA strand

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7
Q

Why are there different types of sigma proteins?

A

To guide RNA Polymerase to different promoters

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8
Q

What is the -10 box? Where is it found on the promoter?

A

10 bases upstream from transcription start and usually consists of the sequence TATAAT (or smthn similar)

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9
Q

What is the -35 box? Where is it on the promoter?

A

35 bases upstream from the transcription start and consists of sequence TTGACA (or something similar)

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10
Q

What is the significance of -35 and -10?

A

Sigma binds to them to start transcription

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11
Q

What opens the DNA double helix and threads the template strand through the RNA polymerase active site in prokaryotes?

A

Sigma protein ofc

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12
Q

What happens to sigma once the initiation phase of transcription is completed?

A

It dissociates from the RNA polymerase

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13
Q

What happens during the elongation phase?

A

RNA polymerase moves along the DNA template and makes RNA

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14
Q

What occurs during the termination phase?

A

The RNA polymerase encounters a termination signal in the DNA which includes forming a hairpin

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15
Q

What are the main differences of transcription in Eukaryotes and Prokaryotes?

A

3 forms of RNA Polymerase (RNA Poly I, II, and III), more than just sigma, and RNA is modified post transcription

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16
Q

What is contained in the primary RNA transcript?

A

Exons and introns

17
Q

How are introns removed from the primary RNA transcript?

A

Splicing

18
Q

What carries out splicing?

A

Small nuclear ribonucleoproteins (ssRNPs) which form a complex called a spliceosome

19
Q

When does splicing usually begin?

A

BEFORE transcription is completed

20
Q

What is a 5’ cap? What does it do?

A

A 7-methylguanosine covalently attached to the 5’ end, needed for the mRNA to exit the nucleus, stability, and needed to bind to the ribosome

21
Q

What is a 3’ poly A tail? What does it do?

A

50-250 A nucleotide added to the 3’ end AFTER transcription, catalyzed by poly A polymerase, important for nuclear export and mRNA stability in the cytosol