test 1 genetic disease Flashcards

1
Q

genes for specific proteins found..

A

in exactly one chromosome

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2
Q

each person should have how many copies of one gene

A

two

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3
Q

what is autosomal dominant

A

when a genetic disease is caused by having just one faulty copy of an autosomal disease

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4
Q

ex of autosomal recessive

A

Marfan Syndrome

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5
Q

Autosomal recessive

A

when a gnetic disease is caused by having two faulty copies of an autosomal disease

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6
Q

ex of autosomal recessive

A

cystic fibrosis

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7
Q

sex-linked genetic condition

A

when a disease is caused by mutations on a sex chromosome

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8
Q

sex-linked genetic diseases almost always

A

affecting the X chromosom

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9
Q

sex-linked genetic diseases can be

A

dominant or recessive

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10
Q

one specific version (DNA sequence of a gene)

A

Allele

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11
Q

The genes a person has

A

Genotype

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12
Q

How a person looks

A

Phenotype

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13
Q

Hetrozygote

A

has two different alleles

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14
Q

hemizygous

A

one copy of a gene is missing

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15
Q

how would hemizygous happen

A

one copy is deleted entirely or not produced, monosomy exists or person is XY

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16
Q

punnet square for recessive disorder

A

25% chance the offspring will have it

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17
Q

punnet square for dominant disorde

A

75% chance the offspring will have it

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18
Q

how can mutations be defined

A

by how they affect DNA sequence

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19
Q

what is a point mutation

A

one base pair is changed to something else

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20
Q

what is a silent mutation

A

mutation causes the same amino acid to be produced

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21
Q

missence mutation

A

mutation causes a new amino acid to be produced

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22
Q

nonsense mutation

A

mutation creates a premature stop codon (UGA)

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23
Q

what is frameshift mutation

A

one base paur is added or removed, causing all codons to be misread

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24
Q

insertion frameshift mutation

A

base pair is added

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25
Q

deletion frameshift mutation

A

base pair is removed

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26
Q

how can mutations also be defined

A

by how they affect gene products

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27
Q

ways mutations affect gene products

A
  • loss-of-function
  • gain-of-function
  • change-of-fucntion
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28
Q

types of loss-of-function mutations

A

amorphic

hypomorphic

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29
Q

amorphic mutation

A

mutation that completely eliminates gene productivity

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30
Q

hypomorhic

A

mutation that slows gene product activity

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31
Q

types of gain-of-function mutations

A

hypermorphic

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32
Q

what is hypermorphic mutation

A

mutation speeds up gene product activity

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33
Q

types of change-of-function mutations

A

neomorphic

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34
Q

neomorphic mutation

A

causes gene product to do something else

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35
Q

what is PKU

A

Phenlketonuria

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36
Q

what is Phenlketonuria

A

disease characterized by a complete lack of functional copies of the enzyme phenylanine hydroxylase

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37
Q

what is phenylanine hydroxylase responsible for

A

responsible for converting the amino acid phenylalanine into the amino acid tyrosine

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38
Q

so what would a lack of functional phenylanine hydroxylase mean

A

BOTH copies of the gene suffered loss-of-function mutations

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39
Q

what is the gene for phenylalanine hydroxylase is called what

A

the PAH gene, found on 12th chromosome

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40
Q

how many loss of function mutations have been found in humans

A

15

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41
Q

first reason that Phenlketonuria is BAD

A

With no way for the body to remove excess phenylalanine, the phenylalanine will bind to and block receptors on the brain that allow other neutral amino acids, like valine and tyrosine, to enter the brain.

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42
Q

second reason why phenlketonuria is bad

A

With no way to produce tyrosine, the body is limited to its dietary supply from digested proteins

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43
Q

what is tyrosine important for

A

for the synthesis of imporant molecules like the neurotransmitter dopamine, and the pigment melanin

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44
Q

recessive disorders like PKU are always cause by

A

the complete lack of a protein in the body

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45
Q

depending on ___, recessive disorders__

A

on where the missing protein should be found and what it does, recessive disorders can be treated by artificially producing and injecting that protein

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46
Q

haploinsufficiency

A

a loss-of-function mutation impedes one copy of a chromosome

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47
Q

result of haploinsufficiency

A

one copy of a gene cannot produce enough protein to satisfy the needs of the cell/body , leading to a sick phenotype

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48
Q

what is Marfan Syndrome caused by

A

a loss-of-function mutation in the FBN1 gene, which codes for a protein called fibrillin-1

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49
Q

what is the job of fibrillin-1

A

to block a the protein TCF-B from binding to cells

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50
Q

what happens when there are not 2 copies of FBN1

A

there aren’t enough copies of fibrilli-1 in the body to stop TGF-B from binding to cells

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51
Q

what is TGF-B

A

a complicated protein that does many things

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52
Q

some of the things TGF-B does

A

regulation of growth in the body, controlling how elastin fibers develop

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53
Q

how does TCF-B’s regulation of growth in the body manifest

A

Marfan Syndrome makes people tal

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54
Q

how does TCF-B controlling how elastin fibers develop manifest

A

it especially effects the eye aorta and heart

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55
Q

what is dominant negative gene action

A

many enzymes in the body are actually multimers

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56
Q

what does it mean to be a multimers

A

made of two or more proteins combining to form a bigger protein

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57
Q

some loss-of function mutations cause

A

cause “bad” protein subunits that can still combine with other functional subunits that do not work, causing problems for the body

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58
Q

p53 is referenced as the

A

guardian of the genome

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59
Q

what is the main function of p53

A

directly binds to DNA and turns on some other genes`

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60
Q

the proteins produced by the genes turned on by p53 will either ….

A

stop the cell cycle if DNA damage is detected

-cause the cell to enter apoptosis is DNA damage is not fixed quickly

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61
Q

what is apoptosis

A

programmed cell death

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62
Q

what is found in virtually all cancer cells

A

mutant or inactivated p53

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63
Q

cells must do what to become cancerous

A

inactivate or circumvent p53 `

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64
Q

how many subunits come together to build p53

A

4

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65
Q

what happens if any of the gene for any one of the subunits of p53 suffers a loss-of-function mutation

A

the broken piece will latch on to 3 working subunits and create a “broken” p53 protein

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66
Q

while ____ of p53s will be broken,, ______

A

half of p53s will be broken, half of the p53 tetramers in a cell will still work

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67
Q

with half of p53s broken

A

only one p53 will bind to DNA when there is a mutation

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68
Q

what happens if the wrong p53 binds to DNA

A

p53 won’t properly turn on those genes and the cell will keep dividing and passing down mutant genes.

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69
Q

two ways to “get” a genetic disease

A

inherited mutations

de novo mutations

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70
Q

inherited mutations

A

come when your parents or parent have a faulty copy of a chromosome that they pass to you

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71
Q

de novo mutations

A

happen independently

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72
Q

de novo mutations happen independently where

A
  • a sperm or egg that fertilizes you

- one cell very early in development mutates

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73
Q

if there is a De novo mutation in a sperm or egg

A

all of your cells will carry this mutation

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74
Q

if there is a De novo mutation in a cell of early development

A

mosaicism

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75
Q

mosaicism

A

only some of your cells carry the mutations

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76
Q

every offspring acquires how many de novo mutations

A

100

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77
Q

as a father ages…

A

he’ll pass more de novo mutations to his offspring

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78
Q

Mendelian traits also called

A

monogenic traits

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79
Q

what are mendelian traits

A

traits affected by exactly one gene

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80
Q

patterns where the mutation can spread depend on

A

where the gene is located and how the protein functions

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81
Q

5 patterns in which mendelian traits can spread

A
autosomal dominant
autosomal recessive
x-linked dominant
x-linked recessive 
y-linked
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82
Q

opposite of mendelian trait

A

polygenic trait, like height

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83
Q

what are pedigree charts

A

“family trees” that track a certain phenotype

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84
Q

Males n females on pedigree

A

males are squares, females circles

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85
Q

ppl with phenotype in question on pedigree

A

shaded

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86
Q

autosomal dominant

A

when a genetic disease is caused by having just one faulty copy of an autosomal gene

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87
Q

pedigree for autosomal dominant will reveal

A
  • men n women affected equally
  • affected person has affected parent, like mother or father
  • if there is no affected person in a generation, transmission stops
  • new (de novo) mutations sometimes possible
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88
Q

autosomal recessive

A

when a genetic disease is caused by having two faulty copies of an autosomal gene

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89
Q

autosomal recessive pedigree will reveal

A
  • affected individuals often have unaffected marriage
  • traits typically show up more in consanguineous marriages
  • tends to skip generation
  • if an affected child is born but neither parent has the disease, future children have a 25 chance of being affected
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90
Q

consanguineous

A

marriages between ppl w same ancestors

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91
Q

x-linked recessive

A

occur when all copies of the x chromosome carry the mutation

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92
Q

pedigree for x-linked recessive reveals

A
  • disease more common in men
  • sons of affected man will never inherit the trait from him
  • daughters of an affected man are carriers
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93
Q

why are x-linked recessive disorders more common in men

A

men are hemizygous (only one copy of a gene)

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94
Q

x-linked dominant disorderss

A

occur when any copy of an X chromosome carries the mutation

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95
Q

pedigree for x-linked dominant disorders will reveal

A

trait is more common in females than males

  • affected males pass trait to all daughters and no sons
  • affected females have a 50% chance to pass disease to all children regardless of sex
96
Q

why are x-linked dominant disorders more common in women

A

females has 2 chances instead of 1, male lethality

97
Q

y-linked disorders come from

A

come from mutated genes on the y chromosome

98
Q

the y chromosome is so small that

A

the genes are unimportant, except for determining “maleness”

99
Q

are there disease that follow y-linked patterns

A

no, almost all mutations are de novo, not inherited

100
Q

why are there no diseases that follow y-linked patterns

A

almost all y mutations result in male sterility… cannot propagate

101
Q

the average person carries how many fatal mutations

A

1 or two, but they are fine because they only carry one copy

102
Q

with over 20,000 genes, what is very unlikely

A

its extremely unlikely that the fatal mutation a person carrier will be on the same gene that their parter’s fatal mutation is on

103
Q

what happens in inbreeding

A

the chance of two people having the same very rare de novo mutation INCREASES a lot

104
Q

what are the alterations to normal mendelian patterns

A
  • common recessive traits
  • male lethality
  • variable penetrance
105
Q

are many recessive traits are very rare in a population

A

yes

106
Q

what happens if a trait is recessive but very common in a population

A

it will appear to be transmitted in a dominant fashion

107
Q

examples of common recessive traits

A

straight hairline, blood type O

108
Q

(male lethality)for many X-linked dominant diseases, affected males often result in what

A

in miscarriage

109
Q

for many X-linked dominant diseases, affected males often result in miscarriages. why?????

A

because they have NO functioning copies to do damage control

110
Q

Male lethality causes females

A

to disproportionately have X-linked dominant diseases, and always pass these to daughters and never sons (they will die)

111
Q

examples of Male Lethality affecting x-linked dominant disorders

A

Rett syndrome, incontinentia pigmenti

112
Q

in variable penetrance, a person with a dominant mutant genotype..

A

does not always express a sick phenotype

113
Q

if 100% of people with a “sick genetype are sick ,70%

A

penetrence is 100%, 70%

114
Q

variable penetrence makes some dominantdisordes

A

appear to skip a generation

115
Q

ex of variable penetrance

A

BRCA1 mutation

116
Q

BRCA1 mutation

A

leads people to increased risk of breast cancer. 80 % of women w mutation will develop breast cancer

117
Q

chimera

A

When two different zygotes (twins) grow in the same womb and “fuse” in some way

118
Q

Chimera results in

A

one fetus that has two unique sets of DNA.\

119
Q

does chimera happen in humans

A

no aside from test tubes

120
Q

mosaicism

A

When a developing embryo suffers a mutation early in development

121
Q

in mosaicism the mutation

A

propagates to all descendants of that early cell, creating a human with two distinct genotyppes

122
Q

mosaicism is…

A

VERY COMMON

123
Q

how much of DNA has instructions for making proteins

A

1%

124
Q

part of DNA w instruction for proteins

A

genes

125
Q

how many genes in the body

A

20 thousand

126
Q

how many unique proteins can be made

A

80-100 thousand

127
Q

all 20,000 genes are found on what

A

chromosomes

128
Q

what is a chromosome

A

a tightly wound chunk of DNA

129
Q

almost every human has how many chromosomes

A

46

130
Q

23 chromosomes are inherited from where

A

mother’s egg

131
Q

the other 23 chromosomes come from where

A

the father’s sperm

132
Q

what is the n number of chromosomes for humans

A

23

133
Q

are the numbers 23 and 46 the same for all organisms

A

no

134
Q

n t

A

the number of chromosomes inherited from one parent

135
Q

in most animal species the organisms have how many n

A

2n `

136
Q

karyotype

A

the map of all chromosomes sorted by size

137
Q

how are chromosomes numbered

A

1-22, X or Y

138
Q

what are chromosomes 1-22 called

A

autosomes

139
Q

the x and y chromosomes are called what

A

allosomes

140
Q

biggest autosomes

A

1

141
Q

smallest autosomes

A

22

142
Q

male

A

XY

143
Q

female

A

XX

144
Q

aneuploidy

A

when an organism does not have 2n chromosomes

145
Q

a triplet of one chromosome

A

trisomy

146
Q

only one copy of one chromosome

A

monosomy

147
Q

zero copies of one chromosome

A

Nulisomy

148
Q

four copies of one chromosome

A

Tetrasomy

149
Q

Multiple copies of all chromosomes

A

polyploidy

150
Q

examples for polyploidy

A

3n,4n,10n etc

151
Q

Robertsonian Translocation

A

look at assignment 1

152
Q

does the body need to have a certain number of each protein inside

A

yes

153
Q

what happens when one extra copy of a chromosome exists (trisomy)

A

the genes on the chromosome are transcribed and translated 1.5 times faster than they should be (because they have 3 chances instead of 2 )

154
Q

what happens w too much protein

A

processes can go awry

155
Q

what will happen with monosomy

A

proteins are only made at 50% of the rate they should be

156
Q

are most aneuploidies survivable

A

NO

157
Q

what will happen to all nullisomies in early development

A

miscarry

158
Q

are monosomies UNsurvivable

A

yes, w two exceptions

159
Q

exceptions to surviving monosomies

A

turner syndrome, cri du chat syndrome

160
Q

what is considered the only true monosomy that is survivable

A

turner syndrome

161
Q

what happens in turner syndrome

A

there is one X chromosome, and no Y chromosome

162
Q

result of turner syndrome

A

short stature, typically infertility, webbed neck, normal intelligence

163
Q

another name for cri du chat syndrome

A

5p minus syndrome

5th chromosome minus 1 p arm

164
Q

is cri du chat syndrome a true monosomy

A

no

165
Q

what i smissing in cri du chat syndrome

A

a portion of the p arm of the 5th chromosome

166
Q

result of cri du chat syndrome

A

delayed development, mental retardation, heart defects, cat-like cry

167
Q

exceptions to trisomies

A

patau syndrome
edwards syndrome
down syndrome

168
Q

patau syndrome is a

A

trisomy 13

169
Q

result of patau syndrome

A

live birth achievable, death within 6 months

170
Q

edwards syndrome is a

A

trisomy 18

171
Q

result of edwards syndrome

A

live birth achievable, death within 6 months

172
Q

down syndrome is a

A

trisomy 21

173
Q

result of down syndrome

A

mental impairment, flattened nose and slanted eyes, heart defects

174
Q

which chromosomes are least sensitive to abnormalities

A

sex chromosomes

175
Q

examples of abnormalities from XX/XY that are seen in humans

A
XXX
XXY
XYY
XXXX
XXXY
XXXXY
176
Q

XXX

A

Triple X syndrome

177
Q

XXY

A

Klinefelter syndrome

178
Q

XYY

A

Jacob’s syndrome

179
Q

the XX/XY abnormalities are usually

A

the XX/XY abnormalities are usually

180
Q

what does DNA stand for

A

deoxyribonucleic acid

181
Q

what is the dna

A

genetic material and instructions for making proteins

182
Q

what is the central dogma of biology

A

transcription and translation

183
Q

what is transcription

A

dna can be used to make rna

184
Q

what is translation

A

rna can be used to make proteins

185
Q

how does dna unwind

A

with dna helicase

186
Q

what happens when DNA unwinds

A

RNA polymerase attaches to one side and makes a complementary strand of mRNA

187
Q

what is mRNA

A

messanger RNA

188
Q

is the entire strand of DNA turned into mRNA

A

NO

189
Q

what is transcribed in transcription

A

small regions (genes)

190
Q

genes account for how much of chromosomal DNA

A

1 to 2 percent

191
Q

where is DNA found in eukaryotes

A

in the nucleus

192
Q

where are ribosomes found

A

in rough ER r cytosol

193
Q

what does mRNA do after being made in the nucleus

A

exit to cytoplasm to find ribosome to be translated

194
Q

translation is which process

A

where ribosomes turn mRNA into proteins

195
Q

when are codons turned into amino acids

A

translation

196
Q

average lifespan of mRNA before it degrades

A

3 to 8 minutes

197
Q

DNA expected lifespan

A

521 years

198
Q

4 nitrogenous bases of DNA

A

Adenine
Guanine
Thymine
Cytosine

199
Q

the order of bases in DNA determine what

A

the protein will be formed

200
Q

how many base pairs are in the genome

A

3 billion

201
Q

what is a codon

A

each 3 letter chunk in the genetic code

202
Q

each codon codes for what

A

a specific amino acid

203
Q

the order of codons determines what

A

the order of amino acids

204
Q

sometimes on a chart

A

T turns into U

205
Q

what are amino acids

A

20 similar-looking molecules with an N side and C side

206
Q

what is an R chain

A

what makes each amino acid unique

207
Q

what is a protein

A

longstrings of amino acids

208
Q

median length of proteins in humans

A

350

209
Q

mean length of protein in humans

A

476

210
Q

how do proteins make their shape

A

fold according to predictable patterns

211
Q

how do proteins attach

A

C side of the previous amino acid combines with the N side of the next amino acid

212
Q

the chemical bond between the C side and N side of amino acids

A

holds them together, called peptide bonds

213
Q

another name for proteins

A

polypeptides

214
Q

amino acid R chains can be

A

polar or nonpolar

215
Q

water is

A

POLAR

216
Q

water and amino acids

A

polar amino acids attracted, nonpolar repelled

217
Q

nonpolar other name

A

hydrophobic

218
Q

polar other name

A

hydrophyllic

219
Q

______ attract each other and form ___

A

cysteine residues attract each other and form disulfide bridges

220
Q

amino acid R chains can also be

A

postively or negatively charged

221
Q

positive amino acids

A

are basic and attract negative (acidic) amino acids

222
Q

some cases where mutation will have no change on a protein

A

when the codon is different but codes for the same amino acid.. so it is the same protein

223
Q

case where a mutation has a small change on a protein

A

the codon is different and codes for a different amino acid, but it is still polar/nonpolar (like the original)

224
Q

case where a mutation has a large change on a protein

A

the codon is different, codes for different amino acid, the charge (polar/nonpolar) is different

225
Q

types of chromosomal mutations

A

translocation, inversion, deletion, duplication

226
Q

translocation

A

When genetic information of one chromosome becomes attached to another chromosome

227
Q

inversion

A

A portion of a chromosome is inverted

228
Q

deletion (chromosomal)

A

A portion of a chromosome is deleted

229
Q

duplication

A

Some genes are duplicated because a segment from one chromosome attaches to its homogenous chromosome

230
Q

B-thalassemia protein and gene

A

B globin, B gene

231
Q

B-globin is used in

A

hemoglobin

232
Q

β0-thalassemia

A

the mutation causes the β gene to be completely inactivated, leading to no β globin being produced

233
Q

B+-thalassemia

A

sometimes the amount of b-globin produced is decreased, but not completely gone

234
Q

what is an acrocentric chromosome

A

chromosome with the centromere located near the end of the chromosome, making one arm dramatically long than the other.

235
Q

the acrocentric chromosmes

A

13,14,15,21, and 22