antibiotics quiz Flashcards
the 3 things that target bacteria
disinfectant, antiseptic, antibiotic
disinfectant
used to sterilize the surface of inanimate objects
disinfectants are typically very
very strong, and destroy many features of bacteria
antiseptic
used to sterilize body surfaces, these are not as strong as disinfectants
antibiotic
used to kill bacteria internally through ingestion or injection
antibiotics are the
gentlest, they should not harm human cells
what makes antibiotics good
broad-spectrum
minimal side effects
broad-spectrum
effective against many different types of bacteria
why is broad-spectrum good
many times, growing a culture will take too long
minimal side effects
little toxicity or host damage
what makes good antibiotics bad
resistance
attack normal flora
why does resistance make good antibiotics bad
makes harmful normal flora bacteria grow resistance, could become harmful or trade genes with harmful ones
why does attacking normal flora make good antibiotics bad
killing off normal flora can lead to bad things
killing off normal flora can lead to……
- increased risk of yeast infection
- increased risk of normal flora infection
- vitamin deficiency
- GI issues
examples of yeast infections caused by antibiotics attacking normal flora
yeast, vaginitis, thrush
examples of normal flora infections caused by antibiotics attacking normal flora
CDiff, MRSA/VRSA
examples of vitamin deficiencies caused by antibiotics attacking normal flora
B, B12, K
examples of GI issues caused by antibiotics attacking normal flora
antibiotic-associated diarrhea.. probiotics
thrush
an overgrowth of the fungus Candida albicans on the tongue
thrush causes
a white slimy layer on top of tongue
yeast vaginitis
an overgrowth of the fungus Candida albicans on the vaginal walls
like in chemotherapy, antibiotics
should damage “bad” cells, while doing as little collateral damage as possible
how do antibiotics avoid collateral damage
- peptidoglycan Synthesis
- protein Synthesis
- DNA/RNA Synthesis
- metabolism (bacteria often have different metabolic pathways)
why do we target peptidoglycan synthesis with antibiotics
no cell walls in human cells
why do we target protein synthesis with antibiotics
ribosome structure is different
why do we target DNA/ RNA synthesis with antibiotics
bacteria use different enzymes to facililatet
why do we target metabolism with antibiotics
bacteria often have different metabolic pathways
________ are defined by the presence of a
beta-lactams are defined by the presence of a beta-lactam ring
how do beta-lactams work
they block one of the last steps of the synthesis of peptidoglycan … BETTER ON GRAM POSITIVE
what is one of the last steps of the synthesis of peptidoglycan that is blocked by Beta-lactams
when transpeptidases and carboxypeptidases build cross-linkages between peptidoglycan strands
transpeptidases and carboxypeptidases together are known as
PBPs
PBPs
penicillin-binding proteins
examples of beta-lactams
- penicillin
- amoxicillin
- methicillin
- cephalexin
antibiotic classes that are beta-lactams (by popularity)
- penicillins
- cephalosporins
- beta-lactams (increased activity)
antibiotic agents that are beta-lactams (by popularity)
- amoxicillin
- amoxicillin, clavulanic acid
- cephalexin
1 antibiotic in india and us
Amoxicillin (beta-lactam)
antibiotics can be protein synthesis inhibitors because
the ribosomes in animal cells and human cells are different
ribosomes
site of protein synthesis
ribosomes are sorted according
to the Svedberg rate of sedimentation (S)
what is the Svedberg rate of sedimentation
how fast the particle settles to the bottom after centrifuge
for the Svedberg rate of sedimentation for ribosomes
the Svedberg rate of 2 subunits of ribosome are added
50s + 30s, 60s + 40s
70s , 80s
in bacteria the size of ribosomes are
smaller an lighter : 70s
inhumans the size of ribosomes
80s
what are the major classes of drugs that take advantage of the different sizes of ribosomes of bacteria and humans
- tetracyclines
- macrolides
Tetracyclines
bind and inhibit the 30s subunit of bacterial ribosomes
tetracylines are very common, ecspecially
very common, especially doxycycline
tetracyclines always come with
with 4 connected rings
Macrolides
bind to and inhibit the 50S subunit of bacterial ribosomes
Macrolides are the ______ most-common type of antibiotic prescribed in the US
2nd
examples of common macrolides
- erythromycin»_space;> ery-pack
- azithromycin»_space; z-pack
4 th most popular drug in india and example of tetracyclines
doxycycline
2 antiboitic class us
macrolides
2 antibiotic US
azithromycin
5 most popular antibiotic drugs in india
macrolides
what antitbiotics stop DNA or RNA synthesis
Fluoroquinolones
Fluoroquinolones
are a class of antibiotic that target and block the bacterial form of DNA topoisomerase II
DNA topoisomerase II
creates small nicks in DNA to relieve torsinal stress
without DNA topoisomerase , bacteri
becomes tightly twisted and DNA and RNA synthesis will stop
main fluoroquinolone
ciprofloxacin
4th most commone antibiotic class , …
fluoroquinolone
3rd most common antibiotic in india, fluoroquinolone
contrimoxazole
purines (needed for replication)
A and G
to make purines the body needs
tetrahydrofolate (THF)
how to make THF
the body uses folic acid reductase on folic acid
how is folic acid acquired in humans
through diet
bacterial cells getting tetrahydrofolate
cannot rely on diet to make THF, instead, make their own
what is used to address THF in bacteria???
sulfa drugs
what do sulfa drugs do
interfere with an ezyme necessary for bacteria to build THF from precursors
good place to look for more antibiotics
bacteria building THF pathway
sulfa drugs always contain
sulfur
example of sulfa drug
sulfamethoxazole
sulfa drugs interfere in THF pathway from
the enzyme that acts on PABA to convert precursor 1 to precursor 2
what is often perscribed w/ sulfa drugs
trimethoprim
trimethoprim interferes in the THF pathway from
dihydrofolate to tetrahydrofolate
mechanisms of antibiotic resistance
- pushing antibiotics out
- stopping antibiotic entry
- target modification
- inactivation of antibiotic
pushing antibiotics out is achieved by
inheriting or overexpressing an efflux pump
efflux pump
transmembrane pump that moves the antibiotic out
stopping antibiotic activity is achieved through
mutation in the shape of a porin can stop entry of antibiotics, can’t do their job
antibiotics often enter cells through
porins
inactivation of antibiotics is achieved through
inheriting a gene that codes for an enzyme that cuts the antibiotic
many bacteria have inherited a gene for
a beta-lactamase , which cleaves beta-lactam containing compounds
pushing antibiotics out is not usually seen
not common with beta-lactams, but often for others
how does bacteria achieve target modification
mutation to the structure that an antibiotic attacks
example of target modifications `
most MRSA infections as a result of mutant PBP structures
mutant PBP structures means that in MRSA
that beta-lactam antibiotics no longer bind to them (and thus, don’t work)
many types of of beta-lactamases
YES
Escherichia are gram what?
gram-negative
Escherichia shape
bacilli
what temp do Escherichia like
mesophilic
do Escherichia form spores
No
Escherichia relationship with oxygen
facultative anaerobes
Escherichia make up what % of human GI flora
0.1 %
what is the “claim to fame” of Escherichia
conversion of digested K1 into K2
Vitamin K2 is
it’s active form in humans
how many species in the Escherichia genus
5-6 known
Escherichia can divide in
just 20 minutes
a newborn’s intestine will typically be colonized with Escherichia within
40 hours of birth
who discovered Escherichia
Theodor Escherich in 1886
E. coli is most linked to what categories of disease
- infection of GI tract
- Urinary Tract Infection
- Meningitis
E. coli cause infection of the GI tract gist
colonization of virulent strain in GI tract can cause bad things
what bad things can colonization of virulent strains of E. coli in GI tract cause
diarrhea and dysentery
dysentery
diarrhea with blood
E. coli is responsible for how much of UTIs
about 85%
how does E. coli cause a UTI
passed from the fecal/oral route to the urethra or bladder
E. coli is how much more commen in girls
14x … urethra is shorter
Meningitis caused by E. coli is usally only commono in
neonates, requires entry into the bloodstream plus the K1 antigen
what does the K1 antigen help E. coli do in meningitis
helps it pass through the BBB (brain blood barrier) into the meninges
how does E. coli spread
through the fecal-oral route
what does it mean that E. coli spreads through the fecal-oral route
feces of fecal matter infected materials must enter the mouth of someone
how does the fecal-oral route usually spread
dirty water or inadequate hand-washing after using the bathroom
E. coli spread is closely linked to what food
ground beef
most important species of Escherichia is
Escherichia coli
E. coli comes in many different
serotypes
serotypes
different strains catalogued by their surface antigens (think lancefield)
Escherichia coli serotypes are grouped based on what surface antigens
Oligosaccharides
Flagellal structure
Capsule
Escherichia coli serotypes are grouped based on what surface antigens KNEUMONIC
O- Oligosaccharides
H-Flagellal structure
K - Capsule
Oligosaccharides as a surface antigen of E. coli
structure of sugar chains at the outer tip of LPS
how many LPS structures known in E. coli
173
how many unique flagellal structures known of E.coli
53
Capsule E.coli
he structure of the protein on the outermost layer of E. coli
how many unique structure known capsule e. coli
60
serotypes of E. coli are another example of
antigenic variation
leading disease-causing stereotype of E. coli
E. coli O157 : H7
and K antigen does not matter in this case
O antigen is
Oligosaccharides, somatic `
E. coli, being negative…. have
many fimbriae
most important type of fimbriae that E. coli have
type I fimbriae
type 1 fimbriae
ecspecially sticky to cells that line the small intestine and/or bladder
type 1 fimbriae allow
bacteria to stick to cells that line the small intestine and/or bladder
once E.coli sticks to cells that line the small intestine and/or bladder
secrete an exotoxin
which exotoxins would E.coli secrete once attached to cells that line small intestine and or bladder
LT, STa, or STb
E.coli secreting exotoxins LT, STa, or STb»» would
increase levels of cGMP in the intestine
when levels of cGMP are increased in the intesine by E coli
- stopping water absorption in the intestines,
- leaving more fluid in the intestinal lumen and triggering diarrhea.
one dominant virulence factor of very bad E coli
Stx
Stx
shiga toxin
Virulent E. coli express that shiga toxins
Stx1 or Stx2
Stx2 compared to Stx1
400 times as potentt
what an exotoxin agin???
secreted proteins
what do Stxs first do when release
receptors on human intestinal endothelial cells to enter the cells
the receptors on intestinal endothelial cells that Stxs bind to
NOT FOUND IN ANIMALS
since the the receptors on intestinal endothelial cells that Stxs bind to are not found in animals
allows virulent strains to grow in animals harmlessly before humans consume them
when shiga toxin enters human intestinal endothelial
one part of a shiga toxin binds to and cleaves an important part of ribosomes in those endothelial cells, halts function
if endothelial cells have no functioning ribosomes
no proteins»> cell death
what receptors do shiga toxins bind to….maybe
GB3
most dangerous E. coli strains like O157 : H7 are called
enterohemorrhagic
what does it mean to be enterohemorrhagic
disrupt the GI tract and cause hemorrhage (bleeding)
what sometimes causes E. coli to be enterohemorrhagic
cell death from Shiga toxin
other times, what causes E. coli to be enterohemorrhagic
protein enterohemolysin
enterohemolysin
breaks apart blood, only acts in intestines
REALLY BAD E. COLI STRAINS
can carry both the genes for a Shiga toxin and enterohemolysin
some E. coli strains re linked to what syndrome
hemolytic uremic syndrome
in hemolytic uremic syndrome there is
broken down blood (from hemolysins) and/or tissue (from shiga toxins
hemolytic uremic syndrome broken down blood and or tissue leads too
mini-clots forming, traveling, and eventually and clogging capillaries
clots from hemolytic uremic syndrome
clots spread through the body usually have the biggest impact on kidneys
clots from hemolytic uremic syndrome effect on kidneys
begin to fail and die
end result of hemolytic uremic syndrome
blood in the urine that onsets 5-10 days after initial E. coli onset
E. coli causes what % of UTIs
85%
in UTIs caused by E. coli, bacteria
get into the urinary tract
when E. coli enters the urinary tract…
problems begin if they hit the bladder
E. coli in the urinary tract can move even
further upstream to the ureters or kidneys