Retroviruses, HIV and AIDS Flashcards
What are the 3 unique big picture conceps of retroviruses
that they have reverse transcriptase
they can activate pro to-oncogenes
they can destroy CTLs
what do most retroviruses cause
leukemias and sarcomas
What are acute transforming viruses
retroviruses that carry intact oncogenes with genome
What enzyme to retroviruses have to incorporate viral genome into hose
integrase
what are defective acute transforming viruses
retroviruses that have lost own RNA needed for replication so need coinfecting virus to cause cancer(if obtained oncogene)
what are non-acute transforming viruses
activate host pro to-oncogenes by integrating viral DNA into key regulatory area
What would you have high on Ddx if patient from tropics has tropical spastic paraparesis
Human T cell leukemia virus I
What is the structure of HIV
spherical enveloped virus with central cylindrical nucleocapsid
2 ss RNA pieces with a nucleocapsid proteins and 3 essential enzymes
icosahedreal symmetry with capsid proteins (p24)
What 3 enzymes must HIV have
protease, reverse transcriptase and integrase
What surface glycoproteins are on HIV
gp120 and 41
What are the long terminal repeats in retroviruses
sticky ends and have promoter/enhancer functions
What genes are encoded on all retroviruses
gag
pol
env
What additonal genes does HIV encode for besides gag pol env
tat, rev, nef, vif, vpr, vpu
what gene codes for the major structural proteins in retroviruses and what are these proteins
gag(Group Ag)
Nucleocapsid, capsidAg(p24) and matrix proteins
What gene encodes for retroviral enzymes
pol
What does env encode for in retroviruses
envelope proteins that form glycoprotein spikes gp 120 and gp41 (gp160 and bind to CD4 T cells)
What are the early proteins in HIV
tat, rev and nef
What are the late proteins in HIV
vif, vpr, vpu
What does tat encode
Transactivator protein that binds genome and activates transcription
what does rev encode
binds to env to decrease splicing so increases reading of gag, pol and env to increase virions
what does nef encode
down regulates CD4 and MHC class I to escape CTL killing
What does vif encode
required for ds DNA to be produced from HIV RNA genome
also blocks APOBEC3 enzymes
What are the APOBEC enzymes
that break down newly made viral DNA
What does vpr encode
Viral protein R that regulates nuclear import of HIV-1 and is required for viral replication in non-dividing cells
What does vpu encode
downregulates CD4 and MHC I expression on cell surfaces and facilitates HIV virion release from cells
Why is HIV so hard to create a vaccine against
has highest mutation rates in many of its components
What group of HIV is responsible for majority of worlds HIV
Group M
What area is subtype HIV B common in
North America and Europe
How is HIV spread
parenteral route