lecture ch 19/20 Flashcards

You may prefer our related Brainscape-certified flashcards:
1
Q

Astrobiology is ____

A

Astrobiology: Study of life’s origin and distribution in the universe

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Around 4.6 billion years ago, Earth and
other planets formed

t or f

A

True

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Evidence of early water

A

Evidence of early water
 When Earth’s crust cooled, water condensed on its surface
 Zircon crystals 4.4 billion years old provide the earliest evidence

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Evidence of early atmosphere

A

Evidence of early atmosphere
 Volcano eruptions led to an atmosphere of water vapor, carbon dioxide,
nitrogen, and hydrogen (toxic and unbearable for us!)
 Iron in the oldest rocks is not oxidized (rust); so the early atmosphere was oxygen free
 Any oxygen would have oxidized organic molecules as soon as they formed

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Formation of organic monomers:

a. Hypothesis 1:
b. Hypothesis 2:
c. Hypothesis 3

A

1=== LIGHTNING FUELED ATOMSOPHEREIC- REACTIONS tested by Miller and Urey in 1953

 Filled a reaction chamber with methane, ammonia, hydrogen gas; zapped with sparks from an electrode
 Within a week, a variety of organic molecules formed, including amino acids

2=== DELIVERY FROM SPACE
 Many meteorites that fell on the early Earth
carried organic monomers that had formed in
space

3=== REACTIONS AT HYDROTHERMAL VENTS
 Underwater geysers where mineral-rich water (mainly Hydrogen
Sulfide) is heated by geothermal energy
 A combo of heat and carbon dioxide, and potassium cyanide may have
formed amino acids

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Eukaryotes have mitochondria. What does the endosymbiont hypothesis say about the origins of mitochondria?

a-A eukaryote capable of cellular respiration was engulfed by an early prokaryote and became an endosymbiont.

b- A prokaryote capable of cellular respiration was engulfed by an early eukaryote and became an endosymbiont.

c- An organelle capable of cellular respiration evolved within the cell from organelles capable of photosynthesis.

d- A prokaryote capable of photosynthesis was engulfed by an early eukaryote and became an endosymbiont.

A

b- A prokaryote capable of cellular respiration was engulfed by an early eukaryote and became an endosymbiont.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

The endosymbiont hypothesis states….

A

The endosymbiont hypothesis states that early eukaryotic cells engulfed prokaryotes capable of __cellular respiration__ .

which explains why all modern eukaryotes have mitochondria, and later some eukaryotes engulfed prokaryotes capable of ___photosynthesis___ ,
which explains why a limited number of eukaryotes have chloroplasts.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

binary fission steps

A
---ADNP---
ATTACHES
DUPLICATES
NEW MEMBRANE AND CELL WALL
PARTIONING OF CELL=2 IDENTICAL DESCENDENTS 

1–The chromosome attaches to the inside of the plasma membrane.

2–The cell duplicates its chromosome and starts to extend its cell membrane and cell wall.

3–When the cell has almost doubled in size, new membrane and cell wall are deposited across the midsection.

4–The partitioning of the cell results in two identical descendant cells.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Which of the following is an organism that obtains energy from light and uses organic compounds as a carbon source?

A

Photoheterotroph

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

When microscopist ______ discovered bacteria, scientists realized that microbes can cause disease and called them PATHOGENS

A

van Leeuwenhoek named them PATHOGENS

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

_______ are non-cellular infectious particles that
consist of nucleic acid surrounded by a coat of
capsid proteins and, in some cases, an envelope
derived from membrane of its host

A

Viruses are….non-cellular infectious particles that
consist of nucleic acid surrounded by a coat of
capsid proteins and, in some cases, an envelope
derived from membrane of its host

-Viruses discovered in late 1800s

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

specialized viruses that infect bacteria

A

Bacteriophages

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Bacteria and archaea have separate domain classifications

but they….

SHARE MANY structural and functional SIMILARITIES

total 6

A

Bacteria and Archaea SIMILARITIES:
1. No nuclear envelope; chromosome in nucleoid

  1. single chromosome (a circular DNA molecule); many species also contain plasmids
    (plasmid=a small circle of DNA separate from the chromosome)
  2. Cell wall (in most species)
  3. Ribosomes distributed in the cytoplasm
  4. Asexual reproduction by binary fission
  5. Capacity for gene exchange among cells by way of conjugation, transduction, and transformation-horizontal gene transfers
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

accessory ring of DNA

used to create gmo

A

plasmid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

about bacteria and archae…

A

Cannot be seen without a light microscope

Three cell shapes are common: bacillus, coccus, and spirillum

Most have a semirigid, porous cell wall around their membrane

Bacteria may also have a slime layer or capsule around their cell wall

Single circular chromosome of double-stranded DNA in a cytoplasmic region called
the nucleoid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Single circular chromosome of double-stranded DNA in a cytoplasmic region called

A

the nucleoid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

hairlike filaments on surface of a cell are called ____ and used for …..

A

hairlike filaments on surface of a cell are called ___pili____ and used for …..
Sticking to surfaces
As grappling hooks to help a cell glide along
In gene exchange with other bacteria

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

Many Bacteria and Archaea have a _______

—- Rotates like a propeller; does not contain microtubules, does not bend side to side

A

flagellum

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

Horizontal gene transfers… (sexual reproduction)

Transformation:

Transduction:

Conjugation:

A

 Transformation: absorbing from the environment
(A cell takes up DNA from its environment and integrates it into its genome)

 Transduction: Bacteriophages move genes between cells
(bacteriophage= virus that can infect bacterial cells)

 Conjugation: Movement of genes in a plasmid,
-happens with sex pillus -straw like structure
(plasmid- accessory ring of DNA)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

Viral Replication
——Most viral replication processes involve the same steps when there is a
CHANCE encounter with a host cell

WHAT ARE THE STEPS
A PENIS RECENTLY SAW A RING GIRL

A

ATTACHMENT
-The virus recognizes and becomes attached to a host cell
PENETRATION
-dna or rna , alone or whole virus, enters cytoplasm
REPLICATION AND SYTHESIS
-Viral genes direct the host cell into replicating viral nucleic acids, synthesizing viral enzymes and capsid proteins
ASSEMBLY
-Synthesized components are put together into new infections particles
RELEASE
-New virus particles are released from the infected cell

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

VIRAL REPLICATION-

Two pathways for bacteriophage replication…..

A

LYTIC PATHWAY
 Viral genes expressed immediately after quickly accomplishing steps 1-4
(previous slide) then causes the cell to rupture (lysis), spilling contents and
virus via step 5.

LYSOGENIC PATHWAY
 Viral genes undergo steps attachment and penetration, but then remain
dormant inside the host cell.
 Viral genes become integrated into host DNA and replicates
 Resume destructive activity later (steps 3-5 in previous slide)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

______ is a retrovirus, which is a virus bearing an RNA genome that is
used as template to produce double-stranded DNA.

A

HIV

 To infect, HIV attaches to white blood cells
 Viral enzymes and RNA are released into the cell and reverse transcription
makes the DNA copy of the viral genome
 DNA enters the nucleus and inserts the viral DNA into the host’s DNA. The
viral DNA is replicated and transcribed along with the host genome.
 Viral RNA and proteins are synthesized, and HIV particles assemble at the
plasma membrane, budding out of the host cell and incorporating its
plasma membrane as the envelope

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

HIV HPV stands for

A

(Human Immunodeficiency Virus),

human papilloma virus

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

_________historically defined as cells without a nucleus

IT Consists of both Bacteria (modern bacteria) and Archaea (ancient bacteria, more recently discovered; many live in extreme habitats)

A

PROKARYOTES

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
Q

_____ build their own food using CO2 as a carbon source

_____obtain energy from light

_____ obtain energy from chemicals

A

Autotrophs build their own food using CO2 as a carbon source

Photoautotrophs obtain energy from light

Chemoautotrophs obtain energy from chemicals

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
26
Q

______________ obtain carbon by taking up organic molecules from their environment, Not capable of making their own carbon (food)

_______________ harvest energy from light and carbon from organic compounds

________________:

  • —-Not capable of making their own carbon (food)
  • —-Obtain energy and carbon by breaking down organic compounds
  • —-All pathogenic bacteria are of this type
  • —-Beneficial bacteria in the digestive tract
  • —–Some are decomposers
A

HETEROTROPHS obtain carbon by taking up organic molecules from their environment
 Not capable of making their own carbon (food)

 PHOTOHETEROTROPHS- harvest energy from light and carbon from organic compounds

 CHEMOHETEROTROPHS
 Not capable of making their own carbon (food)
 Obtain energy and carbon by breaking down organic compounds
 All pathogenic bacteria are of this type
 Beneficial bacteria in the digestive tract
 Some are decomposers

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
27
Q

 Many bacteria and most archaea are anaerobic T OR F

A

TRUE

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
28
Q

______incorporating nitrogen from the air (N2)—-»>ammonia (NH3)

 Photosynthetic eukaryotes need and use ammonium
 Without this, all life on Earth would not be possible

A

Nitrogen fixation:

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
29
Q

Some bacteria can enter a state of suspended animation when conditions are
unfavorable for growth, forming ______
 Some soil bacteria can form an especially resilient resting structure called an____.
-Consists of a stripped-down bacterial cell within a thick, protective covering
- Can withstand heating, freezing, drying, and exposure to UV radiation; surviving in
a dormant state for many years

A

Some bacteria can enter a state of suspended animation when conditions are
unfavorable for growth—–> spore/cyst

some soil bacteria can form an especially resilient resting structure called an ___endospore___.

30
Q

 Describe structural traits shared by bacteria and archaea.

A
 Cell wall around plasma membrane
 Single circular chromosome
 No nucleus – have a nucleoid region
 No organelles except ribosomes
 Flagellum and some of pili
31
Q

List the four modes of nutrition used by bacteria.

A

—-List the four modes of nutrition used by bacteria.
Photoautotrophs- obtain energy from light AND build their own food using CO2
as a carbon source

chemoautotrophs-obtain energy from chemicals and build their own food using CO2
as a carbon source

photoheterotrophs-not capable of making their own food; harvest energy from light and carbon from organic compounds

chemoheterotrophs- Obtain energy and carbon by breaking down organic compounds and cant make their own food
-pathogenic bacteria are al these type

32
Q

how does nitrogen fixation make our world the way it is today and what is nitrogen fixation

A

During Nitrogen fixation, atmospheric Nitrogen is taken up by specialized cells and turned into useful forms of Nitrogen, such as ammonia, so that plants can use it. If there was no way to incorporate atmospheric nitrogen into useful forms, then plants could not function, therefore there wouldn’t be life on land as we know it today.

33
Q

Photosynthetic cyanobacteria:

A

Photosynthetic cyanobacteria: good examples of chloroplast-containing
bacteria; Release free oxygen by noncyclic photosynthesis

 Believed to be responsible for Earth’s first atmospheric oxygen and for the
evolution of chloroplasts
 Some partner with fungi to become lichens
 Aquatic cyanobacteria grow as single cells or as filaments of cells end to end within
a mucus sheath

34
Q

Gram-positive bacteria

 thin/thick
 color stain
 how they eat
lps?
more or less resistant
gram-negative bacteria
 thick/thin
 Stain color
LPS?
more or less resistant
A

Gram-positive bacteria

 thick wall
 Stain purple with a process called Gram staining
 Most are chemoheterotrophs and some are decomposers
 Lactobacillus and species of Streptoccocci

gram-negative bacteria
 Thin-walled
 Stain pink with Gram staining
 Have additional layer of lipopolysaccharides (LPS) outside the cell wall
 Makes them more resistant to antibiotics

35
Q

largest and most diverse bacterial group

  • Include about a third of all known bacteria

 Rhizobium are nitrogen fixing bacteria that live inside plant roots
 E. coli is the most studied prokaryote; lives in the mammalian gut;
easily grown in labs
 Argobacterium infects plants and causes tumors. It is used in a
method to make GMOs
 Myxobacteria, or slime bacteria, have a collective behavior as they
glide about as a swarm and eat other bacteria (they hunt!) – when
food is scarce, 100s-1000s of cells find each other to form a
multicelled fruiting body

A

Proteobacteria

36
Q

Spirochetes and chlamydia:

A

—unrelated lineages of extremely small
bacteria (can barely be seen with a light microscope!)

-Spirochetes shaped like a stretched-out spring
 Some live in the stomach of cattle and sheep; help break down cellulose
 Others are aquatic decomposers, fix nitrogen, are parasites, or are human
pathogens (cause lyme disease and syphilis)

-Chlamydia live inside cells of vertebrates
 Chlamydia trachomatis causes the common sexually transmitted disease
Chlamydia

37
Q

 A substance that bacteria secrete into their environment

 Binds to and directly harm our body cells

A

exotoxin

38
Q

 The LPS of Gram-negative bacteria that are not secreted but released when the
bacteria cell dies and fragments

 Do not directly harm cells but do cause an immune response in the host that results
in fevers and aches

A

Endotoxin

39
Q

Gram-negative bacteria are naturally more resistant to antibiotics because

A

many compounds cannot cross the envelope surrounding their cell wall
(LPS) Lipopolysaccharides

40
Q

Archaea differs from bacteria how?

A

 Archaea lack peptidoglycan in their cell walls

 Archaea cell membrane contains lipids not found in bacteria

41
Q

many archaea thrive in seemingly hostile environments…

thermophiles-
halophiles-
mathanogens-

A

 EXTREME THERMOPHILES- live only at very high temperatures, near
hydrothermal vents and in hot springs

 EXTREME HALOPHILES- live in extremely salty water, in brine-filled lakes
such as the Dead Sea and the Great Salt Lake

 METHANOGENS- generate methane; in sewage, marsh sediments, and
mammalian gut
-Make ATP anaerobically by converting CO2 and hydrogen to methane
- Some reside in humans; In the mouth, archaea may encourage gum
disease; In the large intestine, they may facilitate the extraction of
calories from food, and the abundance of gut methanogens is
correlated with obesity

42
Q

facultative anaerobes

A

Some tolerate oxygen in the environment without harm to themselves

43
Q

What metabolism is used by bacteria that get their energy from light and make their own food

A

photoautotrophs

44
Q

obligate anaerobes

A

Others may be damaged or destroyed by the presence of oxygen

45
Q

A _____ is a noncellular, infectious particle that can replicate only inside a living cell. It is an obligate intracellular parasite. It does not have ribosomes or other metabolic machinery, and it cannot make ATP. To replicate, it must insert its genetic material into a cell of a specific host organism.

-consist of nucleic acid surrounded by a coat of
capsid proteins and, in some cases, an envelope
derived from membrane of its host

  • discovered in the late 1800s
  • free viral particles -“virions” and can be RNA or DNA
A

Viruses

46
Q

General structure of viruses
a.
b.
c.

A

General structure of viruses

a. Viral genome
b. Protein capsid
c. Viral envelope

47
Q

bacteriophage

A

just a virus that can infect bacterial cells

—–little virus monster things

structure:
polyhedral head
dna in the head on top
helical sheath (body)
tail fiber (legs)
48
Q

Define retrovirus.

a. Example? How does it replicate?

A

-Viral enzymes and RNA are released into the cell and REVERSE TRANSCRIPTION
makes the DNA copy of the viral genome

  • DNA enters the nucleus and inserts the viral DNA into the host’s DNA. The
    viral DNA is replicated and transcribed along with the host genome.
49
Q

how do they spread ?

a. Rhinovirus
b. Orythromyxoviruses
c. Papillomaviruses
d. Herpesviruses
e. HIV
f. Ebola virus
g. Zika virus

A

a. Rhinovirus-indirect contact
b. Orythromyxoviruses- airborne
c. Papillomaviruses-direct contact sex
d. Herpesviruses- direct contact
e. HIV-direct contact FLUIDS
f. Ebola virus-direct contact
g. Zika virus–biological vector

50
Q

how do bacteria and archaea reproduce

A

horizontal gene transfer like conjugation, transduction, and transformation
-but mostly binary fission

51
Q

life probably would never have emerged on earth if the ancient atmosphere had which of the following gasses thats now abundant….

A

oxygen

52
Q

the earliest type of eukaryotic organism was probably similar to….

A

animal-like protist

53
Q

Based on metabolic & genetic similarities, modern eukaryotic cells likely evolved from

A

both archaea and bacteria

54
Q

Aerobic respiration became established as a result of the evolution of

A

photosynthesis

55
Q

The hypothesis that RNA served as the genetic information of early life is called

A

RNA world hypothesis

56
Q

Choose all of the following possible explanations for the origin of organic monomers on Earth?

a-Reactions at deep-sea hydrothermal vents

b-Delivery of organic monomers from space on meteorites

c-Lightning-fueled synthesis reactions

d-Reactions on clay tidal flats

A

a-Reactions at deep-sea hydrothermal vents

b-Delivery of organic monomers from space on meteorites

c-Lightning-fueled synthesis reactions

ALL BUT D

57
Q

Which hypothesis suggests that metabolic reactions leading to the first cells took place on hydrothermal vents?

  • Hydrothermal vent hypothesis
  • Iron–sulfur world hypothesis
  • Protoevolutionary hypothesis
  • RNA world hypothesis
A

-Iron–sulfur world hypothesis

58
Q

Which statement is false about protocells?

  • They contain DNA
  • They are able to engage in metabolism
  • They are simple membrane-bound sacs
  • They are able to reproduce
A

-They contain DNA

59
Q

Among prokaryotes, only the cyanobacteria…..

  • live near hydrothermal vents
  • produce oxygen during photosynthesis
  • cannot tolerate oxygen
  • have a nucleus-like structure
A

produce oxygen during photosynthesis

60
Q

Where is bacterial DNA found?

Nucleus; plasmid(s)

Nucleus; capsomeres

Nucleoid; capsomeres

Nucleoid; plasmid(s)

A

Nucleoid; plasmid(s)

61
Q

What are the two main structural components of a virus?

A

Nucleic acid core & protein capsid

62
Q

Which of the following best describes a retrovirus?

  • An RNA virus that becomes a DNA lysogenic virus after it infests a cell
  • An RNA virus that becomes a DNA lytic virus after it infests a cell
  • A DNA virus that becomes an RNA lysogenic virus after it infests a cell
  • A DNA virus that becomes an RNA lytic virus after it infests a cell
A

-An RNA virus that becomes a DNA lysogenic virus after it infests a cell

63
Q

morphology of a chain of sphere-shaped bacteria

A

Streptococcus

64
Q

Which of the following diseases is caused by a herpesvirus?

Measles

Warts

Shingles

Flu

A

shingles

65
Q

Orthomyxoviruses cause what type of illness?

A

flu

66
Q

Bacterial endospores are commonly associated with which of the following diseases?

Tetanus

AIDS

Malaria

Sleeping Sicknes

A

Tetanus

67
Q

organisms might be found symbiotically living in in the stomachs of ruminants, such as cows & sheep….

A

methanogenic archaea

68
Q

Which of the following describes viral genomes?

DNA only

RNA only

Either DNA or RNA

Neither DNA or RNA

A

Either DNA or RNA

69
Q

One cell transfers a plasmid to another by

A

conjugation

70
Q

vesicles that contain interacting molecules, may have been an intermediate step on the road to cellular life.

A

Protocells

71
Q

List the four modes of nutrition used by bacteria.

A

 Photoautotrophs, chemoautotrophs, photoheterotrophs, chemoheterotrophs