haemoglobin structure and function Flashcards

1
Q

what is the primary structure of globin

A

alpha chain has 141 amino acids
beta delta and gamma have 146 amino acids

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2
Q

what is the secondary structure of globin

A

70% of alpha helix

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3
Q

what is the tertiary structure of globin

A

facing of inward non polar residues determines folding

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4
Q

what is the quartenary structure of globin

A

tetrameric, 2 dimers (1 is alpha 1 is beta on top of 2 which is alpha 2, beta ) structure changes on oxygenation allosteric effect

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5
Q

what is the haem structure
what kind of ring with an iron atom at centre

A

protoporphyrin ring

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6
Q

in the haem structure of haemoglobin how many covalent links to nitrogen of pyrrole rings

A

4 covalent links to nitrogen or pyrrole rings

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7
Q

in haem structure how many covalent links to histidine in globin

A

2 covalent links to histidine in globin

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8
Q

why is the distal histidine bond unstable (haem structure)

A

replaced by oxygen co-operative bond) to form oxy-hb

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9
Q

why is h+ and co2 bind to haem

A

to promote o2 release. bohr effect

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10
Q

what does increasing dpg do to haemoglobins affinity for oxygen

A

decreases

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11
Q

how is haem synthesised

A

in red cell precursors mitochondria and cytoplasm
enzyme controlled steps-
glycine and succinate condense to form d-ala delta amino laevulinic acid
porphoblinogen
iron inserts into proto-porphyrin
rate controlling steps
ALA synthase, iron increases rate, haem inhibits

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12
Q

how is globin synthesised

A

globin genes on chromosome 11 and 16
on chromsome 11 fetal gamma2 is alpha 2 on chromosome 16
on chromosome 11 a2 delta 2 is alpha 2 on chromosome 16
on chromosome 11 gene A beta2 is alpha 2 on chromosome 16

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13
Q

how many introns and exons do globin genes have

A

3 exons and 2 introns
splicing machinery recognise sequences then introns removed from transcribed mrna 5’ end of mrna capped so it can attach to ribosomes
3’ end is poly adenylated to stabilise

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14
Q

when is alpha globin produced

A

during early pregnancy

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15
Q

when is beta globin produced

A

near time of birth

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16
Q

what type of globin is not produced after birth

A

gamma globin

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17
Q

when is dpg release increased

A

in response to anaemia, hypoxia
right shift of oxygen dissociation curve so effective oxygen delivery higher p50
sigmoidal shape of curve- changes in po2 at higher levels have little effect on o2 saturation
bohr effect- pco2 increases and ph lowers and so reduction in ph shifts curve to right

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18
Q

what is the bohr effect and how does it change the oxygen dissociation curve

A

the bohr effect is when the carbon dioxide increases and so the ph is lowered, lowering the affinity of haemoglobin for oxygen and so curve shifts to the right.

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19
Q

what are two examples of haemoglobin disorders

A

sickle cell anaemia
beta thalassemia

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20
Q

what is the physiology of thalassaemia

A

reduced production of alpha or beta globin
leads to globin imbalance and precipitation
results in haemolysis in red cells
ineffective erythropoiesis
alpha thalassaemia: 0= deletion of both alpha genes
+= deletion of 1 alpha gene
beta thalassaemia- many non deletional mutations #0 mutations severe so no beta globin synthesis for that allele
+mutations milder so some beta globin synthesis

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21
Q

thalassaemia therapy

A

standard therapy
transfuse for 3-4 weeks
chelate- desferrioxamine
monitor- serum ferritin liver iron conc, heart iron and function organ damage
bone marrow transplantation
gene therapy replacement or beta to gamma switching

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22
Q

sickle cell anaemia

A

autosomal recessive
deoxy haemoglobin forms crystals
heterozygotes have 50% healthy haemoglobin
homozygotes have 100% sickled haemoglobin
vaso-occlusion microvascular obstruction acute crises
chronic progressive organ damage
hbs polymerisation at low po2 causes sickled erythrocytes
they block microcirculation
dynamic reversible process

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23
Q

what are the clinical features of sickle cell anaemia

A

sudden dumping of red cells (sequestrian crises)
spleen infarction

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24
Q

what are clinical features of beta thalassaemia

A

iron overload
bone marrow expansion

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25
what are the complications of sickle cell anaemia
-bacteremia -vaso-occlusion pain chest syndrome stroke chronic organ damage sickle hand foot syndrome
26
what is the management of sickle cell anaemia
prevent and treat acute complications prevent organ damage specific anti sickling options transfusion curative stem cell transplantation or gene therapy
27
how does sickle cell anaemia affect the blood, marrow, spleen, skin, bone , kidney, eye
blood- haemolytic anaemia -marrow- marrow hyperplasia spleen- hyposplenism -skin- chronic leg ulcer bone- avascular hip necrosis osteomyelitis kidney- chronic renal failure eye- prolif retinopathy, retinal detachment
28
what is the structure of haemoglobin
tetramer containing 2 alpha and 2 beta chains 4 haem groups each haem group binds to an oxygen molecule structural changes follow oxygen binding (positive co-operativity)
29
what are the three types of haemoglobin molecules
haemoglobin A2 adult haemoglobin fetal haemoglobin
30
what is the structure of fetal haemoglobin
2 alpha 2 gamma chains
31
what is the structure of a2 haemoglobin
2 alpha 2 delta important to detect beta thalassemia carriers less than 3.5% in adults usually but in beta thalassemia a2 haemoglobin levels are elevated above 3.5%
32
what is the structure of haemoglobin adult
2 alpha 2 beta
33
why does fetal haemoglobin have a higher affinity for oxygen than adult haemoglobin
gamma chains instead of beta or delta chains give the hb an increased affinity so that it can load oxygen at lower partial pressures in the mothers placenta
34
what is the primary structure of haemoglobin (amino acids)
146 amino acids that make up beta gamma delta chains 141 amino acids that make up alpha chains 9 conserved amino acids for oxygen binding
35
what is the secondary structure of haemoglobin
70% alpha helix
36
what is the tertiary structure of haemoglobin
folding determined by inward facing non polar residues
37
what is the quartenary structure of haemoglobin
tetameric made of 2 dimers 1 dimer (alpha 2 beta 2) on top of second dimer (alpha 2 beta 2) subunit interaction for allosteric effects structural changes follow oxygen binding
38
explain the structure of haemoglobin in more detail
protoporphyrin ring iron atom at the centre haem iron 6 co-ordinating valencies 4 link to nitrogen of pyrrole rings 2 link to histidine residues in globin distal histidine bond is unstable estility replaced by oxygen to form oxy-haemoglobin
39
what is the porphyrin
4 pyrrole molecules cyclically linked together by methane
40
where is haem synthesised in
in mitochondria and cytoplasm of red cell precursors in enzyme controlled steps
41
explain the enzyme controlled steps
first step-condensation of glycine and succinate forming delta amino laevulinic acid d-ala
42
explain the intermediate step in haemoglobin synthesis
porphobilinogen uroporphobilinogen coproporphyrin 111
43
what is the final step of haemoglobin synthesis
insertion of iron into protoporphyrin
44
what is the rate controlling step in haemoglobin synthesis
ALA synthesis (iron increases rate, haem inhibits)
45
where are the globin genes present on
chromosome 16 chromsome 11
46
what is the gene composition of chromsome 16 downstream up
alpha 2 alpha 1 some shape cant disern
47
what is the gene composition of chromsome 11 downstream up
beta delta agamma ggamma epsilon
48
what is the significance for why we test for delta haemoglobin for beta thalassemia
beta thalassemia causes less synthesis of beta globin and so haemoglobin a2 levels increase they are elevated above 3.5
49
how many exons and introns are present on alpha and beta genes
3 exons 2 introns
50
what happens to the mrna after transcription to allow translation
5' of mrna must be capped allowing mrna to attach to ribosomes 3' end of mrna must be poly andelyated to be stabilised
51
what type of haemoglobin is made in the liver
gamma alpha
52
what type of haemoglobin is made in the bone marrow
alpha beta
53
what type of haemoglobin is made in the spleen
alpha beta gamma
54
explain the binding of oxygen to haemoglobin
binding of oxygen to haemoglobin is co-operative binding
55
explain the binding of h+ co2 to haemoglobin
h+ binds to haemoglobin forming haemoglobinc acid - lowers affinity of haemoglobin for oxygen promotes oxygen release bohr effect
56
what is the shape of deoxygenated haemaglobin
open and taut tense
57
why is the shape of oxygenated haemoglobin different from the shape of deoxygenated haemaglobin
oxygenated haemoglobin is compact and relaxed because every time an oxygen molecule binds it breaks the salt bridges
58
what is p50
the partial pressure of oxygen in the blood when 50% of haemoglobin molecules are saturated
59
what is the normal p50 value
26.6mmhg
60
what is p50 used for
to compare affinity of haemoglobin for oxygen
61
what happens to p50 whenthere is a rightward shift of oxygen (decrease in oxygen)