Exam One Flashcards
Virion
complete extracellular infective form of a virus
Virus
includes the virion of inactivated virus particle, or viral nucleic acid and protein in the infected cell
Viriod
infectious particle smaller than viruses, agent of some plant dzs
Where will viral attachment proteins be found
envelope or capsid (if the virus is naked)
Nucleocapsid
nucleic acid + capsid
Incomplete virion
empty capsid
Defective virus
Can’t replicate due to mutations or errors, needs helper virus
Episome
extra-chromosomal genetic element
Provirus
viral DNA is integrated into host cell chromosome (can be transmitted to daughter cells)
Cubic Symmetry/Icosahedral
12 corners/verticies, 20 facets (triangula faces and 30 edges.
Helical structure
capsomeres + nucleic acids self-assemble, impossible for incomplete virions to form (all helical viruses are enveloped)
Complex structure
Made up of several parts w/ seperate shapes and symmetries. Think Pox Virus
Capsid functions
structural symmetry nucleic acid production attachment of naked viruses contains enzymes (reverse transcriptase) Detemines antigenic characteristics
How is the envelope/lipid bilayer acquired?
budding
What do Glycoprotein peplomeres/spikes do?
receptor binding
What do fusion proteins do?
Viral entry/release
What do matrix proteins do?
recognition site and add rigidity
How can the lipid bilayer be disrupted?
Drying, acid, heat
Solvents (ether or chloroform)
Detergents (sodium deoxcholate)
T/F all viral genomes are haploid
true, only contain 1 copy of each gene
Monopartitie
all genes in 1 choromosome (all DNA viruses)
Multipartitie/segmented
genes distributed among several chromosomes and can undergo genetic reassortment
Which sense RNA strand is infectious if injected into host cell? (+/-)
+
- sense RNA not infectious
Which is more stable, naked or enveloped viruses?
Naked
Viral proteins are denatured at what temp?
55-60
T/F acid leads to reversable dissassembly of the capsid
F, can also be irreversible
Hematogenous spread/Viremia
Virus reaches bloodstream via lymphatics or direct innoculation and replicates in endothelial cells or subepithelial blood vessels
Passive viremia
direct innoculation
Active viremia, primary
progeny viruses released from initial site of infection into the blood stream
Active viremia, secondary
Release of the virus from a localized area of secondary multiplication of the virus in the bloodstream
Cell associated viremia
viruses not cleared by Ab and tend to cause prolonged viremia
How can viruses be transported via neural spread?
axons
endoneural space
perineural lymphatics
infected Schwann cells
Centripedal movement
towards the brain
Centrifugal movement
CNS to body
Macule
flattened, red and inflammed, virus replicating in the dermis noninfectious
Papule
raised and reddened, local inflammation, noninfectious
Vesicle
fluid filled and raised, contains infectious virions
Pustule
Pus filled vesicle, can lead to scar formation
Infection of the GIT causes
enteritis, diarrhea, usually infect undifferentiated cell of villi
rapid destruction of enterocytes then replacement by cubiodal cells (self limiting infections)
Viral infectious of Resp tract can cause
Ciliostasis
Loss of mucus layer
Destruction of epithelial cells
Depressed alvelor macrophages
Neurotropic viruses cause
neuronal necrosis
nonsupprative encephalitis
perivascular infiltration of mononuclear cells (perivascular cuffing)
Infection of vascular epithelium leads to
activation of intrinisic pathway of clotting
edema and petechial hemorrhage
Disseminated Intravascular Coagulation
T/F Most viral infections of the dam have no effect on the fetus
True
Inapparent Viral Infection
Doesn’t cause noticeable illness
Most viruses are this
Acute viral infection followed by clearance
Short clinical course, virus cleared by host immune system
Persistant infections
Host immune response can’t clear the virus
carrier animals can continouly or intermitently shed the virus
Persistant infection type I
virus persists in a non infective form with intermitent periods of reactivation and shedding
Persistant Infection Type II
Chronic infection
Virus continually shed
host immune system can’t eliminate the virus
Persistant Infections Type 3
Slow infections, prolonged incubation periods
slow, progressive lethal dz (think prions)
Cytopathic effect
Virus damage/death to host cell
Inclusion bodies
Intracellular structures produced in cells by some viruses
Proto-oncogenes
Code for proteins that control normal cell growth
Oncogenes
genes coding for transformation of normal cells
Tumor suppresor genes
genes that code for proteins that control cell proliferation, arrest in G1
Rb protein
stops entry into S phase
unphosphorylated Rb protein
active- stops replication
phosphorylated Rb protein
inactivates- replication
p53
arrests cell cycle and apoptosis when cell is damaged
Oncogenic viruses
Mostly DNA viruses
Usually integrate into host genome
Lysins
hydrolytic enzymes that cleave cell walls
Retroviral integrase
enables retrovirus genome to be integrated into host DNA
Reverse transcriptase
generate cDNA from RNA template
Nucleic acid polymerase
viral genome replication
Neuraminidases
cleaves glycosidic bonds allowing release of viruses from host cells
Antigenic drift
point mutations within genes that code for antibody binding sites
Silent mutation
no change in a.a.
nonesense mutation
stop codon
missense mutation
change in aa
Genetic recombination
exchange of nucleotide sequences between 2 viruses
Genetic reassortment
Exchange of genome segments b/w related
viruses (happens faster than recombination)
Defective interfering mutants
deletion mutation, lacks one or more functional genes needed for virus replication
Need help of wild type virus, can be persistant
Viral interference
multiplication of virus is inhibited by an infective virus already in the cell
Pseudotype
related viruses infect the same cell and they swap genomes in their capsids
Pseudovirion
capsid encloses host nucleic acid, look like normal viruses but cannot replicate
What is a primary monolayer?
Cells taken directly from humans/animals
Heterogenous/Same chromosome #
Max 20 subcultures
What is a diploid cell line?
single cell type derived from human embryonic tissue or subcultures of a primary culture.
Can be subcultured 100 timesq
What is a continuous/immortal cell line?
capable of indefinite propagation in vitro
derived from tumor cells or by mutating primary or diploid cell lines
Do not resemble cells of origin, abnormal chromosome #
FDA prohibits their use in vaccine production
How do you prepare a monolayer?
- Treat tissue with a protease like trypsin
- Put in polystyrene container allowing anchorage
dependent growth and add growth medium - Incubate at optimal temperature for that species
How do you prepare from Rapid Cell Culture System
Rapid Cell Culture System
1.Grow a monolayer on a cover slip of a shell
vial [1-dram]
2.Add the clinical sample to the monolayer and centrifuge
3.Stain the monolayer with horseradish peroxidase or
antibodies to detect the virus
What grows on CAM
herpes and pox viruses
What is the color change in Growth medium?
Phenol red turns orange with cell growth
Virus Titration
quantitative determination of viral activity
Virus Titer
# of infectious units/ml of sample lowest concentration of virus that still infects cells
Physical Quantification
measures the exact # of virus in sample TEM Flow cytometry (virus counter 2100) Hemagglutination assay- Ag conc PCR
Biological Assay- Monolayer Plaque Assay
Cells are incubated as a monolayer and infected with a virus
Cells are placed in agar and the virus will kill infected cells
Counter stain so cells are clear against a red or purple background
determine titer as plaque forming units/ml
Biological Assay- Pock Assay
Titration of viruses on the CAM of the chick embryo, pock forming units/ml
Biological Assay- Transformation Assay
Same as monolayer but for oncogenic visues
Viruses transform cells so that they lose contact inhibition, observe mound (focus) of cells
focus forming units
Quantal Assay
No number only presence or absence of infection