ECM Flashcards
1
Q
What are the functions of ECM
A
- Provides support for cells and cell layers (anchors cells to underlying stromal CT)
- Acts as a barrier: impedes the passage of cells
- acts as passive selective molecular seieve bet tissue compartments
- acts as a solid phase reg of cell attachment, growth and diff
- Modulates the mineralization process
2
Q
What components can ECM be divided into
A
- fibers
- amourphous ground substance
- basement membrane
3
Q
What are filaments
A
threadlike structure; smallest in diameter; typically a single molecule or linear chain of molecules
4
Q
What are microfibrils
A
an aggregate of filaments
5
Q
what are fibrils
A
aggregate of microfibrils; first thing we can see on EM
6
Q
what are fibers
A
an aggregate of fibrils
7
Q
What can fibers be divided into
A
- Elastic
2. collagen
8
Q
what is ground substance made of
A
glycoproteins, glycosaminoglycans, proteoglycans
9
Q
Proteoglycans are in a bunch of diff ____and in diff ____-
A
tissues; amounts
10
Q
The types of cells that secrete ECM are:
A
fibroblasts
11
Q
Enamel is the only ECM that is secreted by an ____type of cell
A
epithelial
12
Q
What are specialized CT’s:
A
- cartilage: chondroblasts
- bone: osteoblasts
- dentin: odontobasts
- enamel: ameloblasts
- Basement membrane: epithelia, muscle, fat, Schwann cells
13
Q
______is the most abundant protein of the body
A
collagen; skin has the most, (75%), then cartilage (50%) then coricol bone (25%)
14
Q
Collagen facts:
A
- Left -handed helix; not a true alpha helix!
- Proline ring structure adds rigidity
- no Trp or Cys in mature form, not nutritious.
- high content of OH-pro/OH-lys is useful for quantifying collagen content
15
Q
What is the structure of collagen
A
- 3 helical strands wrap around each other = TROPOCOLLAGEN
- Tropocollagen fibrils arrange themselves in staggered array of parallel bundles.
- alignment of every 4th molecule causes striations, visible by EM
- Crosslinks via lysinonorleucine!
16
Q
Lysinonorleucine is a _____aa and requires the enzyme ____ ____ ____ which requires Vitamin ___ as a cofactor
A
nonstandard; lysyl amino oxidase; Vitamin B6
17
Q
What are the classifications of collagen
A
- Some form typical fibers
- Some just form microfibrils that dont assemble into fibers.
- Each collagen molecule consists of three alpha chains
- 34 diff alpha chains known: collagen family
18
Q
What are the 5 types of collagens
A
- Fibrillar: form long fibers with high tensile strength.
- Non fibrillar:
- Basement membrane collagens (network forming)
- Fibril-associated collagen with interrupted triple helix (FACIT)
- Multiplexins
- Microfibrillar colalgen
19
Q
How are collagen families grouped
A
Group chains into 28 diff subfamilies based on ability to interact to form triple helices.
-Diff members of subfamily denoted by subscript
20
Q
What are the fibril forming collagens
A
I, II, III, V, and XI; they assemble into bundles.
21
Q
WHat is type I collagen
A
the most abundant; found in most CT and is a major component of :
- bone
- tendon
- skin
- dentin
- ligament
- fascia
- arteries
- uterus
22
Q
Where is type II collagen found
A
component of hyaline cartilage and is found in articular surfaces
23
Q
Where is type III collagen found
A
Made up of reticular fibers and is found in skin, arteries, uterus, prominent in periodontal ligament and there is a very low level in bone.
24
Q
What is Type IV basement membrane collagen
A
Found in lens of eye and is the most abundant structural component of basement membranes
25
What are FACIT collagens
- Large multidomain molecules
- have two or more very short helical rods sep by small non triple helical domains
- Have large N-terminal non collagen helix domain
26
What are two types of FACIT collagens
1. Type IX: cartilage and certain embryonic tissue
| 2. Type XII: similar distribution to type 1 collagen (many CT)
27
Describe Type VI microfibrillar collagen
dumbell shaped molecule with short helical domain and large globular domain at each end. Its ubiquitously distributed in CT and especially abundant in CORNEA
28
Describe Type VII microfibrillar collagen
- Longest triple helix of the collagens
- Found in anchoring fibrils of BM underlying stratified epithelia
- N-terminals of each chain folded into arms and contain vWF and fibronectin repeat domains
- C-terminal has small globular domain involved in microfibril assembly
29
How is collagen formed?
1. Starts at ER called preprocollagen.
2. Attach OH to Pro and Lys
3. Attach sugars to hydroxy-lys
4. Form triple helix
5. Package into vesicles
6. Tropocollagen formed after registration peptide cleaved off and forms fibrils
7. fibrils crosslink
30
Where is lysyl oxidase formed. Where is proline hydroxylase formed?
extracellular space; intracellular space
31
What is Collagen XVII
1. Anchoring fibrils found in hemidesmosomes of epidermal-dermal junction
2. Transmembrane protein
3. N terminal in cytoplasm
4. C terminal flexible extracellular rod.
32
How is collagen degraded
1. Specific collagenases hydrolyze collagen peptide bonds. -->fragments denature and release single chain fragments
2. Cleaved denatured collagen called gelatin.
33
What is fibronectin
Ubiquitous ECM glycoprotein:
1. soluble form in body fluids
2. insoluble form in ECM, esp BM
3. Plays a major role in embryogenesis, wound healing, hemostasis, and thrombosis
34
What is RGD
3 aa sequence: argenine, lysine, and aspartate; they bind to cells by binding to integrins (cell transmembrane rec proteins that interact with ECM)
35
Fibronectin is also a ____protein. It is comprised of 3 diff modules
modular; it provides binding sites for cells, ECM components, blood proteins and GAGs
36
What is the fibronectin network like
secreted as a dimer of 2 large monomers held by disulfide bonds.
37
What regions interact to form fibronecting meshwork
1. N terminal heparin binding domain
2. RGD cell binding domain
3. first Fn3
38
What are features of elastic fibers
1. Forms triple member tropoelastin that complex into fibers.
2. Desmosine crosslinks that make it stretchy
3. Rich in glycine, alanine, and lycine
4. Not a true alpha helix
39
____also makes up elastic fibers and is loc on periphery, in interior of elastic fiber, free in ECM
Oxytalan
40
_____also associated with elastic fibers and have domains that have homology to EGF. It is a coating in elastic fibers which is found in
Fibrillins; heart valves and big blood vessels.
41
What are features of BM
1. Structureless that is subjacent to basal surface of epithelia, kidney glomerulus and lung alveoli.
2. produced by eptithelial, endothelial and many mesenchymal cells
42
The part closest to epithelial tissue is called ____The part that is closest to connective tissue is called_____
basal lamina; reticular lamina:
43
What makes up the basal lamina
lamina lucida, lamina densa
44
What does reticular lamina look like
Its underneath basal lamina and has collagen fibers; Have hemidesmosomes.
45
What are BM glycoproteins
1. Laminin
2. Nidogen/Entactin
3. Fibulins
46
What are laminins
Most typical and abundant non collagenous glycoproteins of BM
- looks like a cross
- made up of alpha, betta and gamma polypeptides
47
What do laminins form
polymeric scaffold through calcium mediated interactions bet domains in short arms of cross.
-binds to heparin, collagen type 4, and nidogen
48
What is nidogen
dumbell shaped molecule with laminin/collagen IV binding domain at one end, self aggregating domain at other, sep by rod like connecting domain. It dimerizes then cross links with laminin and collagen IV
49
What are fibulins
1. Relatively abundant BM glycoproteins, that contain 9 EGF like repeats. Thought to link cells to BM
50
WHat is tenascin
found in oral cavity. Upregulared during periods of wound wealing. Has multiple Fn3 domains, and may help in cell migration bcit has anti adhesive domain that help cells move.
-6 subunits, star shaped arrangment, held together by Disulfide bonds
51
if cell binding then you have:
RGD receptors
52
what form hemidesmosomes
integrins, collagen 17, and transmembrane proteins
53
Mechanical movement of the ECM is sensed by intracellular molecules such as the ____components via changes in _____conformation. Signals are also transduced to the nucleus by clusters of integrins called ____ ____ and a ____associated with them.
cytoskeletal; integrin; focal adhesions; FAK
54
What are considered mineralized tissues
1. bone
2. enamel
3. dentin
4. cementum
(formed by deposition of hydroxyapetite crystals of specialized ECMs)
55
What are features of bone
1. formed by osteoblasts and deposition of hydroxyapetitie crystals into a specialized ECM.
56
What are membrane bones? what about endochondral bones?
1. osteoblasts secrete matrix that become mineralized
2. cartilage model is removed and replaced with new matrix made by osteoblasts.
- replacement req ECM remodeling which is secreted by osteoclasts.
57
Bone is ___percent collagen Type 1.
25;
58
What are the non collagenous proteins in bone
1. acidic glycoproteins
2. some are phosphorylated
3. some contain Gla residues (gamma carboxylate glutamate impt for calcium binding)
4. some are proteoglycans
59
What is an ex of a non collagenous bone protein
1. Osteonectin (SPARC): Present in ECM of all bone
- has low levels in dentin
- binds Ca, hydroxyapetitie and collagen
- important in bone formation but role unclear
60
what is an ex of another non collagenous bone protein
Osteopontin (bone sialoprotein I, BSP I)
- Acidic bone glycoprotein, low levels in dentin, cementum
- contains phosphoserine and poly ASp sialic acid
- high affinity for calcium
- contains RGD sequence
- involved in attaching osteoblasts to osteoid.
61
What is bone sialoprotein (BSP II)
Non collagnous bone protein:
1. 50% carbs
2. contains stretches of polyglutamic acid
3. high Ca affinity
4. RGD sequence
5. Marker for early stages of mineralization
6. Made by osteoblasts, odontoblasts, low levels by chondrocytes.
62
What are osteocalcins
Non collagenous bone protein
- binds Ca with high affinity and adheres to hydroxyapatite crystals
- found in bone, dentin, and cementum
- Though to be involved in reg crystal growth
63
WHat is dentin
Predentin becomes mineralized by hydroxyapetite deposition to form dentin.
- Dentin type 1 collagen differs than skin collagen bc it has 3 x more hydroxylysine, more cross-linked, has loose knit packing of filaments in fibrils.
- No type III collagen as opposed to skin
64
Dentin-sialophosphoprotein (DSPP) is a _____for dentin that can get processed into ___ and DGP
precursor; DPP
65
What is the most abundant protein in dentin after collagen
DPP;
- polyanionic
- can bind large amounts of calcium at high affinity
- will bind collgen
- involved in initiating mineralization in circumpulpal dentin
- ONLY FOUND IN DENTIN
66
What is dentin sialoprotein
Recently discovered dentin non collagenous protein
- contains glycoprotein
- thought to be inv in regulating mineralization
- ONLY FOUND IN DENTIN
67
Enamel has less than 1% organic material. Its the only mineralized tissue made by
epithelial cells (ameoblasts); unlike other mineralized tissues, hydroxyapetite crystals are not deposited in a collagen matrix (no hydroxyproline!)
68
What are amelogenins
proteins secreted by ameloblasts into dev enamel during amelogenesis; over 90% of enamel protein content
- coded on X and Y chromosomes
- degraded by proteinases during mineralization
- Tyrosine rich amelognin peptide fragment incorporated into enamel
- Thought to be involved in regulating organization and growth of enamel crystals
69
Amelogenin forms ____which are kind of like actin. Its a globular protein that self assembles into fibers which is the driving force for formation of parallel bundles of apatite during enamel formation and reg's calcium phosphate crystal growth.
nanochain
70
What are enamelins
1. enamel specific proteins
2. hydrophilic
3. left behind in enamel after mineralization complete
4. Can only be extracted by dissolving material
5. Interacts with amelogenin; may stabilize amelogenin oligomers and affect interaction with mineral phase
71
what are enamel proteases
1. MMP -20 (enamelysin): only tooth specific MMP, processes amelogenin; promotes amelogenin self-assemby
2. Kallikrein-4: Further digest proteolytic products of amelogenin and enamelin. Required for proper mineralization and hardening of enamel during maturation.
72
what is cementum
1. Thin layer of calicified tissue covering root surface of teeth
2. like dentin, bulk is type 1 collagen
3. unlike dentin, contains type III collagen as well
