Chapter 17 Flashcards

1
Q

transcription

A

transcribe DNA into RNA

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2
Q

prompter

A

signal to start transcribing
- codon of 3 nucleotides

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3
Q

how many types of RNA polymerase do bacteria and eukaryotes have

A

bacteria= 1
eukaryotes- 3 (I, II, III)

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4
Q

initiation (transcription)

A

RNA polymerase attaches to promoter

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5
Q

elongation (transcription)

A

RNA grows longer
- RNA polymerase moves along DNA

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6
Q

as RNA peels away, what happens (transcription)

A

DNA strand rejoins

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7
Q

termination (transcription)

A

RNA polymerase reaches sequence of based in DNA template to signal end of gene

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8
Q

what happens after termination in transcription

A

polymerase detaches from RNA molecule & gene

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9
Q

mRNA

A

encodes amnio acid sequences
- conveys genetic message from DNA

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10
Q

what does eukaryotic mRNA have

A

introns- interrupting sequences that separate
exons- coding regions

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11
Q

what does transcription end with

A

termination

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12
Q

what are introns considered

A

white noise

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13
Q

terminator

A

signals end of gene

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14
Q

sigma

A

protein that must bind promoter first & form holoenzyme
- recognizes & binds to promoter

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15
Q

core enzyme

A

RNA polymerase because it has active site

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16
Q

how are introns removed

A

splicing

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17
Q

spliceosome & splicing

A

cut out extra information that isn’t needed
- allows different mRNAs & proteins to be produced from single gene

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18
Q

in eukaryotes, what does splicing do

A

remove introns & joins exons

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19
Q

pre-mRNA

A

primary transcript
- in bacteria mRNA are translated immediately & transcript is an immature primary transcript before transcription is complete

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20
Q

ribosomes

A

site of protein synthesis
- where translation happens

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21
Q

polyribosome

A

multiple ribosomes attached to an mRNA

22
Q

in eukaryotes, how are mature mRNAs transported to cytoplasm

A

by ribosomes

23
Q

where does translation occur

A

on surface of ribosome

24
Q

what are the two subunits of ribosomes

A

small- holds mRNA in place
large- where peptide bonds form

25
what is the structure of ribosomes
contain many proteins, ribosomal RNA (rRNA), and can be separated into 2 subunits
26
what lines up with ribosomes during translation
three tRNAs
27
what are the 3 sites in the ribosome
- A site - P site - E site
28
A site
acceptor site for aminoacyl tRNA
29
P site
peptidyl site where a peptide bond forms
30
E site
where tRNAs without amino acids exit the ribosome
31
transfer RNA (tRNA)
function as language interpreter - convert genetic message of mRNA into language of proteins
32
how does tRNA perform the interpreter task
pick up appropriate amino acid using an anticodon to recognize the appropriate codons in the mRNA
33
aminoacyl tnRNA
tRNA linked to its amino acid
34
what is the structure of tRNA
- relatively short - can form secondary structure by folding - CCA sequence at 3' end is binding site for amino acids
35
aminoacyl-tRNA synthetases
enzymes that "charge" the tRNA by catalyzing the addition of amino acids to tRNAs - adds amino acids onto tRNA
36
for 61 different codons, how many tRNA are there
about 40 tRNAs
37
wobble hypothesis
- Crick - tRNA can grab more than 1 ingredient - anticodon of tRNAs can still bind successfully to a codon whose third position doesn't follow traditional base pair rules
38
what do ribosomes provide for mRNA and tRNA
binding sites - subunits and binding sites come together
39
anticodon
figures out what amino acid codons are coding for
40
ribosomal RNA (rRNA)
involved in protein synthesis - helps align mRNA & tRNA on ribosome & catalyzes the formation of peptide bonds
41
polypeptide chain
strand of amino acids linked by peptide bonds
42
ribosome binding site
where the small ribosomal subunit bind to the mRNA
43
initiation factors
control whether initiation can begin or not
44
translocation
occurs when ribosome slides one codon toward the 3' end of mRNA
45
release factor
- protein - enters the A site - does not carry an amino acid - hydrolyzes the bond linking the P-site tRNA to polypeptide chain - binds to stop codon in terminating translation
46
molecular chaperones
speed protein folding
47
what are the three phases of translation
initiation- gets translation to start elongation- going through A, P, & E to build out chain termination- stop codon
48
how is translation initiated in bacteria
- mRNA binds to small ribosomal unit - initiator tRNA bearing f-Met binds to start codon - large ribosomal subunit binds so initiator tRNA is in P site
49
what are the stages of transcription
initiation elongation RNA peels away termination
50
transcription in bacteria
sigma protein mist bind prompter first RNA polymerase & sigma form a holoenzyme
51
what happens in bacteria before transcription is complete
ribosomes being translating an mRNA