Chapter 15 Flashcards

1
Q

what is the central dogma of molecular biology?

A

DNA –> RNA —> protein

transcription, translation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

what is transcription?

A

the flow of info from DNA to RNA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

what is translation?

A

the flow of info from RNA to protein

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

how does DNA read amino acids?

A

in sets of 3 nucleotides for each amino acid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

what is a codon?

A

3 nucleotides that specify a certain amino acid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

what is a reading frame?

A

series of nucleotides that produce the right protein when read in sets of 3

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

what are proteins?

A

specific sequences of amino acids

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

who deciphered the genetic code and how many possible codons are there for the 20ish amino acids?

A

Nirenberg, 64 codons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

can different codons represent the same amino acid?

A

yes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

what are stop codons and which ones are they (3)?

A

UGA, UUA, UAG

terminate translation instead of coding for an amino acid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what is a start codon?

A

AUG, signifies the starting point of translation IF at the beginning of a sequence, if in the middle or end, it’s just Met

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what is the remainder of the codons other than start and stop codons?

A

degenerate, where some amino acids are specified by more than one codon

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

what is the template DNA strand?

A

used to make RNA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

what is the coding DNA strand?

A

complimentary to the template strand, not used to make RNA, but is same sequence as RNA but with T’s instead of U’s

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

what is RNA polymerase?

A

enzyme that synthesizes the primary RNA transcript using template DNA strand

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

list and describe the 3 steps of transcription

A
  1. initiation- RNA polymerase identifies a specific DNA sequence
  2. elongation- ribonucleotides are added to the 3’ end of the new RNA
  3. termination- RNa polymerase stops when it encounters a specific terminator DNA sequence
17
Q

where does transcription take place in eukaryotes? in prokaryotes?

A

euk: nucleus
pro: cytoplasm

18
Q

list and describe the 3 steps of translation?

A
  1. initation- mRNA, tRNA, and ribosome come together
  2. elongation- tRNAs bring amino acids to the ribosome to build the polypeptide
  3. termination- ribosome encounters a stop codon and releases polypeptide
19
Q

where does translation occur?

A

cytoplasm for both bc that’s where the ribosomes are

20
Q

list and describe the 3 types of RNA needed for gene expression

A
  1. mRNA- carries the info from DNA that encodes proteins
  2. rRNA- structural component of ribosome
  3. tRNA- carries amino acids to the ribosome for translation
21
Q

at what rate does the transcription bubble move down the DNA template during prokaryotic transcription?

A

50 nucleotides/sec

22
Q

what 3 things does the transcription bubble consist of?

all the things needed for transcription

A
  1. RNA polymerase
  2. DNA template
  3. growing RNA transcript
23
Q

when does transcription stop in prokaryotes?

A

when the transcription bubble encounter terminator sequences, often includes a series of A-T base pairs

24
Q

how is the primary transcript (initial RNA molecule) modified in eukaryotes? (2)

A
  1. additions of a 5’ cap and 3’ poly-A tail

2. removal of noncoding sequences (introns and exons)

25
what are introns?
stay in nucleus
26
what are exons?
will be translated
27
what do tRNA's do?
carry amino acids to the ribosome to build polypeptides
28
what do aminoacyl-tRNA synthetases do?
add amino acids to the acceptor arm of tRNA
29
what does the anticodon loop of tRNA have?
3 nucleotide sequences complementary to mRNA codons
30
list and describe the 3 tRNA binding sites
1. P site: binds the tRNA attached to the growing peptide chain 2. A site: binds the tRNA carrying the next amino acid 3. E site: binds the tRNA that carried to last amino acid to the chain
31
how does translation read the mRNA?
5' to 3'
32
what are the 2 primary functions of the ribosome?
1. decode the mRNA | 2. form peptide bonds
33
what does peptidyl transferase do?
forms peptide bonds between amino acids
34
what stops translation?
the ribosome encounters a stop codon
35
what recognizes stop codons in translation and what do they do?
release factors; release the polypeptide from the ribosome
36
where can translation occur in eukaryotes?
RER or cytoplasmic ribosomes