Ch. 1 - Histology & Its Methods of Study Flashcards

1
Q

DAPI and Hoechst stain

A

Specifically bind DNA
Used to stain cell nuclei
Emit a characteristic blue fluorescence under UV

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Histology

A

The study of the tissues of the body and how these tissues are arranged to constitute organs

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Fixation

A

Small pieces of tissue are placed in solutions of chemicals that preserve by cross-linking proteins and inactivating degradative enzymes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Dehydration

A

The tissue is transferred through an ascending series of alcohol solutions, ending in 100%, which removes all water

Water and paraffin aren’t miscible

Can’t go directly to 100% EtOH (tissue trauma)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Clearing

A

Alcohol is removed in toluene or other agents in which both alcohol and paraffin are miscible

Aka intermediate agent

Usually an organic compound; alters the refractive indicies of the tissue which makes it clear

Organic solvents dissolve lipids so must use cryotomy

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Infiltration

A

The tissue is placed in an ascending series of melted paraffin until it becomes completely infiltrated

No higher than 58C or the tissue will denature

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Embedding

A

The paraffin-infiltrated tissue is placed in a small mold with melted paraffin and allowed to harden

Orientation of the tissue is important

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Trimming or Sectioning

A

The resulting paraffin block is trimmed to expose the tissue for sectioning (slicing) on a microtome

Makes serial sections ~ 5-7 microns thick

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Microtome

A

Instrument used for sectioning paraffin-embedded tissues for light microscopy

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Fixative

A

Stabilizing or cross-linking compounds used to fixate tissue samples
Different fixatives for different purposes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Basophilic cell components

A

Anionic
Stain with basic dyes
Ie: nucleic acids

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Acidophilic cell components

A

Cationic
Stain with acidic dyes
Ie: proteins with many ionized groups

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Basic dyes

A

Stain basophilic cell components

Toluidine blue, alcain blue, methylene blue, hematoxylin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

H&E stain

A

Hematoxylin (basic dye, stains acidic material i.e. nucleus) and eosin (acidic dye, stains basic material i.e. cytoplasm)
Most commonly used staining method

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Trichromatic dye

A

Mallory stain, Masson stain

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Acridine orange

A

Fluorescent compound that binds to nucleic acids in DNA and RNA

Can distinguish between the two

Used in fluorescent microscopy

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

Fixative properties

A

Preserve tissue
Harden tissue
Inhibit bacterial growth (bacteria decompose tissue)
Block autolysis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

Autolysis

A

Autolysis of the cell

Due to lysosome ruptures containing hydrolytic enzymes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

What is the most common fixative?

A

10% buffered formalin

pH ~ 7.5

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

Cryotomy

A

Freezing the tissue before sectioning

Preserves the tissue structure

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

Staining

A
  1. Clear paraffin
  2. Rehydrate via descending series of alcohols
  3. Stain with dye
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Slide Prep

A
  1. Obtain tissue sample and fixate
  2. Dehydrate (ascending series of EtOH)
  3. Clearing (of EtOH)
  4. Infiltration (paraffin)
  5. Embedding (paraffin block)
  6. Sectioning (use microtome)
  7. Staining
    a. clear paraffin
    b. rehydrate (descending series of alcohols)
    c. stain
  8. Dehydrate (to preserve dye)
  9. Clearing (of dye)
  10. Cover slip
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

Condenser

A

Collects and focuses a cone of light that illuminates the object

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

Objective lens

A

Enlarges and projects the image of the object to the eyepiece or ocular lens

25
Eyepiece or Ocular lens
Magnifies the image
26
Total magnification of light microscope
Objective X Ocular
27
Resolving power or Resolution
The smallest distance between two points at which they can be distinguished
28
What is the relationship between magnification and resolution?
Directly proportional
29
Fluorescence Microscopy
Tissue sections are irradiated with UV light, which appears brilliant on a dark background
30
Phase-Contrast Microscopy
Light Microscope Can be used with living cell cultures Parts of the cell appear lighter or darker depending on how fast light travels through them due to refractive indices No fixation or staining
31
Differential Interference Microscopy (DIC)
Light Microscope A modification of phase-contrast Produces an image of living cells in 3D
32
Confocal Microscopy
Light Microscope Uses a small point of light from a laser through a pinhole for better resolution and sharper focus than a bright-field microscope
33
Polarizing Microscopy
Light Microscope Based on vibrations Sample is placed between two polarizing filters and the axis of light rotates and the sample appears as a bright structure against a dark background
34
Birefringence
Ability to rotate the direction of vibration of polarized light Feature of crystalline substances or substances containing highly oriented molecules, such as cellulose, collagen, microtubules, and actin filaments
35
Bright-field microscopy
Light Microscope Ordinary light passes through a thin section of the specimen from below, producing a 2-D image
36
Light microscopy
Microscopy that is based on the interaction of light with tissue components Used to reveal and study tissue features
37
Electron microscopy
Microscopy based on the interaction of tissue components with beams of electrons Better resolution that light microscopy due to electron beams shorter wavelength
38
Transmission Electron Microscopy (TEM)
Electron microscope Permits resolution ~ 3 nm Magnification of up to 40,000 X for isolated macromolecules or particles An electron beam is pointed at the specimen, where some of the electrons pass through the specimen and some interact with it (absorbed or deflected) Creates a 2-D black, white, and gray image depending on the interactions of electrons Brighter where electrons passed readily, and darker (more electron dense) where electrons were absorbed or deflected
39
Scanning Electron Microscopy (SEM)
Electron microscope The surface of the specimen is dried and coated with a layer of heavy metal (gold), through which electrons do not pass readily Creates a black and white 3-D image by interacting with the metal and producing secondary electrons, which are captured by a detector
40
Autoradiography
A method of localizing newly synthesized macromolecules (DNA, RNA, protein, glycoproteins, and polysaccharides) in cells or tissue sections
41
Primary cell culture
Cells cultured from a tissue or organ
42
Cell line
Cell types isolated from tissue are maintained in vitro for long periods of time and become immortalized
43
Transformation
Certain changes that promote cell immortality
44
Enzyme histochemistry
Aka cytochemistry Method for localizing cellular structures using a specific enzymatic activity present in those structures Usually use unfixed or mildly fixed tissue sectioned on a cryostat to preserve the enzymes and avoid adverse effects of heat and organic solvents
45
Steps of cytochemistry
1. Tissue sections are immersed in substrate of enzyme to be localized 2. Enzyme is allowed to act on substrate 3. Section is put in contact with a marker compound that reacts with a product of the enzyme-substrate reaction 4. The product from the marker precipitates over the site of enzymes, allowing the region to be localized microscopically The product from the marker must be insoluble and visible by light but having color or electron mic or by having e- density
46
Phosphatases
Enzyme that splits the bond between a phosphate group and phosphorylated molecules Used to ID alkaline and acid phosphates
47
Dehydrogenases
Enzyme that removed H+ from one substrate and transfers them to another Used to ID mitochondria
48
Peroxidase
Enzyme that promotes oxidation of substrates with the transfer of H+ to H2O2, forming H2O molecules
49
How can we visualize specific molecules?
Using a tagged compound or a macromolecule that binds specifically with the macromolecule of interest Must be visible with light or e- microscope
50
The most commonly used labels are _______ compounds and _______.
fluorescent; metal particles
51
What are some molecules that interact specifically with other molecules?
1. Phalloidin 2. Protein A 3. Lectins
52
Phalloidin
Interacts strongly with actin Tagged with fluorescent dyes Commonly used to demonstrate actin filaments in cells
53
Protein A
Obtained from S. aureus Binds to the Fc region of IG antibodies Can be used to localize naturally occurring or applied ab bound to cell structures
54
Lectins
Proteins or glycoproteins derived mainly from plant seeds Bind to carbohydrates with high affinity and specificity Different lectins bind to specific sugars or sugar residues Tagged with fluorescent dyes Used to stain specific glycoproteins, proteoglycans, and glycolipids
55
Immunohistochemistry
Histologic method using labeled ab used to detect specific proteins or other molecules of interest in cells and tissues Requires an ab against the protein or molecule of interest
56
How are ab of protein x of a certain animal species produced?
The isolated protein is injected into a different animal species If the protein's amino acid sequence is different enough for this animal to recognize it as foreign, then it will produce ab against the protein
57
What are the steps to immunohistochemistry?
1. A tissue section/cells believed to contain the protein of interest is incubated in a solution with the labeled ab to that protein 2. Ab binds specifically to the protein 3. Protein location can then be seen with either light or electron microscope
58
Polyclonal antibodies
Different groups (clones) of lymphocytes in the injected animal that recognize different parts of wanted protein x