Bacterial genome organisation 1 Flashcards

1
Q

What kind of genome do most bacteria have?

A

Circular

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2
Q

What kind of genome do streptomyces have?

A

Linear

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3
Q

What is bacterial DNA stored in?

A

Chromosomes and plasmids

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4
Q

How is a chromosome depicted when in a paper?

A

A circle

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5
Q

What can plasmids do?

A

Give bacteria extra propertie

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6
Q

What are the two strands of bacterial genomes called?

A

Leading and lagging strand

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7
Q

Where does DNA replication begin from in bacteria?

A

The origin

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8
Q

In which direction can bacterial DNA replication go?

A

Both

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9
Q

Which strand can be used for replication in bacteria?

A

Leading and lagging

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10
Q

What can differences in CG content of bacteria show?

A

Where horizontal gene transfer has happened

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11
Q

What are features of interest in a bacterial genome?

A

rRNA genes, RNA genes, tRNA genes

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12
Q

What mutational bias occurs involving Gs and Cs?

A

More Gs on the leading strand compared to the lagging strand

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13
Q

What is the relationship between genome size and number of genes in bacteria?

A

Linear

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14
Q

What proportion of every bacterial genome is unique to that organism?

A

20-40%

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15
Q

Which type of bacteria have the most DNA?

A

Soil organisms

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16
Q

Why do soil organisms have the most DNA?

A

They need to be able to cope with the different conditions that they could be in

17
Q

What do bacteria with small genomes have to do?

A

Rely on other organisms for their function

18
Q

Examples of things that bacteria may rely on other organisms for?

A

Osmotic balance, metabolites, AAs

19
Q

Why do obligate intracellular bacteria not always cause disease?

A

They rely on the host for some functions

20
Q

Why may a bacteria have a large genome?

A

Needs to do a lot of its own stuff–> i.e. metabolism etc

21
Q

Which bacteria is involved in antibiotic production?

A

Streptomyces

22
Q

How does a bacterial genome fit into a bacterial cell?

A

Supercoiling

23
Q

What are the two types of supercoiling?

A

Overwound DNA and underwound DNA

24
Q

Characteristics of overwound DNA?

A

Tightly wound
+vely supercoiled
Strands difficult to separate
harder for metabolic fucitons to take place

25
Characteristics of underwound DNA?
Underwound Negatively supercoiled Strands easier to separate
26
Which type of supercoiling is harder to do?
Positive (overwound)
27
How many base pairs per turn does overwound DNA have compared to underwound DNA?
Less
28
bp per turn of overwound DNA?
less than 10.4
29
bp per turn of underwound DNA?
more than 10.4
30
How is DNA underwound?
Breaking the DNA and passing the strands through to change the # of twists, before fixing the DNA
31
Type 1 of underwinding DNA?
breaks 1 strand, no ATP
32
Type 2 of underwinding DNA?
breaks 2 strands, ATP