ANTIMICROBIAL RESISTANCE Flashcards
WHAT ARE ANTIMICROBIALS?
MEDICINES USED TO PREVENT AND TREAT INFECTIONS CAUSED BY MICROORGANISMS IN HUMANS, ANIMALS AND PLANTS,
INCLUDE ANTIBIOTICS, ANTIVIRALS, ANTIFUNGALS AND ANTIPARASITICS
—> AN ANTIMICROBIAL DRUG WORKS AGAINST ONLY 1 TYPE OF ORGANISM
WHAT IS ANTIMICROBIAL RESISTANCE?
WHEN THE MICROORGANISMS CHANGE OR MUTATE OVER TIME AND GET TO A POINT WHERE THEY NO LONGER RESPOND TO MEDICINES PREVIOUSLY USED TO TREAT THEM
- ENCOMPASSES ANTIBIOTIC, ANTIVIRAL, ANTIFUNGAL AND ANTIPARASITICS RESISTANCE
- A NATURAL PROCESS/OCCURANCE (EVOLUTIONARY CHANGES, SURVIVAL OF THE FITTEST), BUT MASSIVELY ACCELERATED BECAUSE OF HUMAN ACTIONS
IS MALARIA CAUSED BY A VIRUS, BACTERIA, PARASITE OR FUNGI?
PARASITE
WHAT ARE USUAL TARGETS OF ANTIBIOTICS?
- CELL WALL (GOOD TARGET BECAUSE HUMAN CELLS DO NOT HAVE A CELL WALL; E.G. BETA LACTAMS)
- CELL MEMBRANE
- FOLATE-PROTEIN SYNTHESIS
- DNA/RNA SYNTHESIS
SOME MECHANISMS PF ACTION OF ANTIVIRAL MEDICINES?
- INHIBITING ATTACHMENT/ENTRY OF VIRUS TO HOST CELL
- INHIBITING REPRODUCTION
- INHIBITING VIRUS LEAVING THE CELL
ANTIFUNGALS MECHANISM OF ACTION?
- GENERALLY VIA IMPACT ON CELL MEMBRANE (VIA ERGOSTEROL: a sterol that resides on the cell membranes of fungi and acts to maintain cell membrane integrity)
- SOME ALSO ACTING VIA CELL WALL (VIA BETA-GLUCAN INHIBITORS)
HOW DOES MICROBES RESISTANCE SPREAD? (E.G. BACTERIA)
- BACTERIA IN HUMAN BODY ARE DIVERSE, AND SOME ARE DRUG RESISTANT
- ANTIBIOTICS KILL BACTERIA BUT RESISTANT STRAINS REMAIN
- ANTIBIOTIC RESISTANT BACTERIA MULTIPLY (ANTIBIOTICS HAVE KILLED OFF COMPETING BACTERIA, AIDING THIS PROCESS)
- ANTIBIOTIC RESISTANCE SPREADS TO OTHER HUMANS/ANIMALS AND TO OTHER BACTERIA
- SHARING OF RESISTANCE AMONG BACTERIA OCCURS VIA HORIZONTAL GENE TRANSFER; MEANING THAT GENETIC MATERIAL IS SHARED WITHOUT REPRODUCTION (E.G. VIA PLASMIDS)
DESCRIBE THE ROLE OF HORIZONTAL GENE TRANSFER IN SPREADING AND CO-SELECTION OF ANTIBIOTIC RESISTANCE?
- HORIZONTAL GENE TRANSFER ENABLES ORGANISMS (E.G. BACTERIA) TO SHARE GENETIC MATERIAL WITHOUT REPRODUCING WITH EACH OTHER (the non-sexual movement of genetic information between genomes)
- THIS IS SOMETIMES DONE VIA SHARING PLASMIDS
- PLASMIDS CAN HAVE SEVERAL RESISTANCE GENES (TO DIFFERENT MOLECULES); THIS MEANS THAT WHEN ONE ANTIBIOTIC IS USED, IT NOT ONLY INCREASES THE PREVALENCE OF BACTERIA RESISTANT TO THAT ANTIBIOTIC, BUT ALSO THOSE RESISTANT TO OTHER ANTIBIOTICS –> CO-SELECTION (This means that a bacterium can become resistant to multiple antibiotics at once by picking up a single plasmid. They then become multidrug-resistant. Co-resistance occurs when the genes specifying resistant phenotypes are located together on the same genetic element such as a plasmid.)
SOME ANTIBIOTIC RESISTANCE MECHANISMS?
- EFFLUX; ANTIBIOTICS PUMPED OUT OF CELL
- TARGET MODIFICATION (SITE WHICH ANTIBIOTIC WAS TARGETING ALTERED)
- IMMUNITY/BYPASS; STOP ANTIBIOTIC ACCESSING TARGET
- ENZYMES; STOP ANTIBIOTICS FROM FUNCTIONING
DISK DIFFUSION?
The disk diffusion test (also known as the agar diffusion test, disc-diffusion antibiotic susceptibility test, disc-diffusion antibiotic sensitivity test) is a culture-based microbiology assay used in diagnostic and drug discovery laboratories. In diagnostic labs, the assay is used to determine the susceptibility of bacteria isolated from a patient’s infection to clinically approved antibiotics. This allows physicians to prescribe the most appropriate antibiotic treatment. In drug discovery labs, especially bioprospecting labs, the assay is used to screen biological material (e.g. plant extracts, bacterial fermentation broths) and drug candidates for antibacterial activity.
- –> SHOWS HOW CLOSE MICROBES CAN GROW TO DISC IMPREGNATED WITH ANTIBIOTIC AGENTS (ZONE OF INHIBITION)
- —> ANTIBIOTICS DIFFUSE FROM THE DISC SO HIGHER CENCENTRATION OF ANTIBIOTICS CLOSER TO DISC
WHAT IS MINIMUM INHIBITORY CONCENTRATION? (MIC)
the lowest effective concentration of an antimicrobial agent that inhibits visible growth of a bacterium of interest!!!!!!!!
- CAN BE DETERMINED BY PERFORMING A DISK DIFFUSION SYLE EXPERIMENT, A STRIP IS PLACED ONTO AN AGAR PLATE AND IT CONTAINS DIFFERENT CONCENTRATIONS OF AN ANTIBIOTIC ALONG IT (INDICATED BY NUMBER); EFFECT OF DIFFERENT CONCENTRATIONS CAN BE OBSERVED
(culture with a strip that has graduated levels of antibacterial agent in)
WHAT IS MINIMUM BACTERICIDAL CONCENTRATION (MBC)?
- MINIMUM CONCENTRATION OF ANTIBIOTICS THAT CAN KILL BACTERIA
- add liquid cultures mixed with increasing concentration of antibiotics to series of cultures
WHAT ARE THE DRIVERS OF ANTIMICROBIAL RESISTANCE?
MISUSE AND OVERUSE OF ANTIMICROBIAL AGENTS:
- INAPPROPRIATELY PRESCRIBED
- INAPPROPRIATELY USED
- USE FOR GROWTH PROMOTION/PROPHYLAXIS IN ANIMALS
- LOW UALITY DRUGS
(E.G. ANTIBIOTICS USED FRO NON-BACTERIAL INFECTIONS STILL HAVE AN IMPACT ON THE PERSON - KILL OFF THE NON-RESISTANT BACTERIA WITHIN THE ORGANISM WHICH ALLOWS THE RESISTANT ONES TO PROLIFERATE)
WHAT ARE SOME SOCIETAL FACTORS ENABLING RAPID SPREAD OF EMERGING ANTIMICROBIAL RESISTANCE?
- LARGE, DENSE HUMAN/ANIMAL POPULATIONS
- RAPID TRAVEL
CHANGE IN ANTIBIOTIC USE IN FOOD-PRODUCING ANIMALS FROM 2015 TO 2019?
45% DROP
WHY IS ANTIMICROBIAL RESISTANE NOT ADDRESSED MORE IN THE DRUG DEVLOPMENT INDUSTRY?
- MARKET FAILURE/WRONG INCENTIVES (MORE OPPORTUNITY TO RECOUP COSTS/PROFIT FROM DRUGS FOR CHRONIC CONDITIONS, HIGH COST CANCER DRUGS, FROM AMR PERSPECTIVE, WOULD WANT DRUGS TO BE USED AS INFREQUENTLY AS POSSIBLE RATHER THAN AS MUCH AS POSSIBLE)
- ’ LOW HANGING FRUIT’ OPTIONS ARE GONE (EASIER CANDIDATES TO BE DEVELOPED INTO ANTIBIOTICS HAVE BEEN DONE)
- INFECTIOUS DISEASE NOT SEEN AS A PRIORITY
THE DISCOVERY VOID?
“The discovery void” refers to the period from 1987 until today, as the last antibiotic class that has been successfully introduced as treatment was discovered in 1987.
Resistant infections occurred also in the early days of antibiotic use, but a steady flow of new antibiotics provided alternative treatments. It was possible to simply switch treatment once resistance against a specific antibiotic became a major problem. But then the antibiotics stopped coming. The latest discovery of a new antibiotic class that has reached the market was back in 1987. Since then there has been a lack of innovation in the field, and today there are few novel antibiotic classes in the drug pipeline. The consequences are seen worldwide as more and more bacterial infections are becoming hard to treat once again. Especially worrisome is the lack of antibiotics against Gram-negative bacteria.
CONSEQUENCES OF ANTIMICROBIAL RESISTANCE ON POPULATION HEALTH?
- INFECTIONS HARDER TO TREAT (CAN BE ASSOCIATED WITH HIGHER RISK OF DEATH; E.G. MULTI DRUG RESISTANT S. AUERUS: 64% INCREASED RISK OF DEATH COMPARED TO METHIILIN SENSITIVE S. AUERUS)
- LONGER TREATMENT (E.G. MULTI DRUG RESISTANT TUBERCULOSIS)
- MORE EXPENSIVE TREATMENT
- LENGTH OF STAY INCREASED
- USE OF DURGS PREVIOUSLY AVOIDED DUE TO SIDE AFFECTS (E.G. COLISTIN)
- COST TO INDIVIDUALS (AND THEIR FAMILIES AND THE WIDER SOCIETY) WHEN UNWELL FOR LONGER
CONSEQUENCES OF ANTIMICROBIAL RESISTANCE ON POPULATION HEALTH?
- INFECTIONS HARDER TO TREAT (CAN BE ASSOCIATED WITH HIGHER RISK OF DEATH; E.G. MULTI DRUG RESISTANT S. AUERUS: 64% INCREASED RISK OF DEATH COMPARED TO METHIILIN SENSITIVE S. AUERUS)
- LONGER TREATMENT (E.G. MULTI DRUG RESISTANT TUBERCULOSIS)
- MORE EXPENSIVE TREATMENT
- LENGTH OF STAY INCREASED
- USE OF DURGS PREVIOUSLY AVOIDED DUE TO SIDE AFFECTS (E.G. COLISTIN)
- COST TO INDIVIDUALS (AND THEIR FAMILIES AND THE WIDER SOCIETY) WHEN UNWELL FOR LONGER
TB DRUG RESISTANCE IN THE UK?
2020:
- 6% OF TB CASES WERE RESISTANT TO AT LEAST ONE FIRST LINE DRUG
- 7% WERE MULTI DRUG RESISTANT
MODELLED GLOBAL ESTIMATES OF DEATHS FROM ANTIMICROBIAL RESISTANCE? (2019)
- 4.95 MILLION DEATHS ASSOCIATED WITH BACTERIAL AMR (ASSOCITED=RELATIVE TO NO INFECTION)
- 1.27 MILLION DEATHS ATTRIBUTABLE TO BACTERIAL AMR (ATTRIBUTABLE=RELATIVE TO AN ANTIBIOTIC SENSITIVE INFECTION)
WHICH 6 BACTERIA ARE ATTRIBUTABLE TO 73% DEATHS FROM ANTIMICROBIAL RESISTANCE?
- E. COLI
- S. AUREUS
- KLEBSIELLA PNEUMONIAE
- STREPTOCOCCUS PNEUMONIAE
- ACINOBACTER BAUMANNII
- PSEDUMONAS AERUGINOSA
IN DEVELOPED COUNTRIES, MOST DEATHS FROM ANTIMICROBIAL RESISTANCE ARE ATRIBUTABLE TO WHICH 2 BACTERIA?
E. COLI AND S. AUREUS