Unit 2 - The Cell Episode 5 Flashcards
are membrane enclosed compartments associated with all the endocytic pathways
restricted to a portion of the cytoplasm near the cell membrane
Early endosomes
are vesicles originating in early endosomes travelling to deeper structures in the cytoplasm
Typically mature into lysosomes
Late endosomes
Early endosomes - Cellular localization
found in the more peripheral cytoplasm
Early endosomes - Morphology
have a tubulovesicular structure
Early endosomes - State of acidification
exhibits only a slightly acidic environment (pH 6.2 to 6.5) than the cytoplasm of the cell
Early endosomes - Function
to sort and recycle (ang clathrin and adaptin) proteins internalized by endocytotic pathways
- Essential Enzyme
- mature into lysosomes
Late endosomes
Late endosomes - cellular localization
positioned near the Golgi apparatus and the nucleus
Late endosomes - Morphology
have a more complex structure and often exhibit onionlike internal
Late endosomes - State of acidification
more acidic, averaging 5.5
Inactive precursor of hydrolase)
released by the late endosomes
Prohydrolase
This help package the hydrolases into vesicles that bud from the trans-golgi network to deliver their contents to endosomes that ultimately will develop into mature lysosomes
Mannose-6-Phosphate receptor (M6P receptor)
Endosomes can be viewed either as __________ cytoplasmic organelles or as ________________________
stable; transient structures
Two different models that explain the origin and formation of the endosomal compartments in the cell:
Stable Compartment Model
Maturation model
describes early and late endosomes as stable cellular
Stable Compartment Model
endosomes and then to lysosomes early endosomes are formed then matures to late endosomes and then to lysosomes
Maturation Model
digestive organelle
Lysosomes
Spherical, with 0.05-0.5 μm diameter
Present a uniformly granular, electro-dense appearance in TEM
Lysosomes
Lysosomes is a membrane-limited vesicles that contain about
40 hydrolytic enzymes
Lysosomes has lysosomal enzymes that can be seen using
histochemical procedure
Lysosomal enzymes synthesized in the rER (rough ER) and sorted in the golgi apparatus based on their binding ability to
M-6-P receptors (Mannose-6-Phosphate receptor)
Most common are hydrolases:
PROTEASOMES, NUCLEASES, PHOSPHATASES, PHOSPHOLIPASES SULFATASE, BETA- GLUCURONIDASE
Lysosomes have a unique membrane that is resistant to the hydrolytic digestion occurring in their _____
lumen
Lysosomal membrane has unusual phospholipid structure that contains cholesterol and a unique lipid called
Lysobisphosphatidic acid
lysosome-associated membrane proteins (lamps), lysosomal membrane glycoproteins (Igps), and lysosomal integral membrane proteins (limps).
represent more than 50% of the total membrane of the proteins
Membrane proteins
Lysosomes and late endosomes contain _________ and __________ that transport the final products of digestion.
proton (H) pumps; transport proteins
proteins are synthesized in the rER and have specific lysosomal targeting signals.
lysosomal membrane
an agent used in the treatment and prevention of malaria, is a lysosomotropic agent that accumulates in the lysosomes. It raises the pH of the lysosomal content, thereby inactivating many lysosomal enzymes. (By raising pH)
Chloroquine
causative agent of Malaria
Plasmodium falciparum
The action of chloroquine on lysosomes accounts for its antimalarial activity; the drug concentrates in the acidic food vacuole of the malaria parasite (Major digestive organelle) and interferes with its digestive processes, eventually
killing the parasite
Three pathways of material delivery for intracellular digestion in lysosomes:
Extracellular large particles
Extracellular small particles
Intracellular particles
such as bacteria, cell debris, and other foreign matenals are engulfed in the process of phagocytosis
Extracellular large particles
phagocytosis occur through your
phagosomes
such as extracellular proteins, plasma-membrane proteins, and ligand- receptor complexes are internalized by pinocytosis and receptor-mediated endocytosis
Extracellular small particles
such as entire organelles, cytoplasmic proteins, and other cellular components are isolated from the cytoplasmic matrix by endoplasmic reticulum membranes, transported to lysosomes, and degraded- autophagy
Intracellular particles
Three well-characterized pathways of autophagy:
Macro- autophagy
Micro- autophagy
Chaperone- mediated autophagy
____________ is a nonspecific process
A portion of the cytoplasm or an entire organelle is first surrounded by the isolation membrane of endoplasmic reticulum, to form a vacuole called _____________which matures into lysosomes
Isolation membrane disintegrates within the hydrolytic compartment of a lysosome
Macroautophagy; autophagosomes
is also a nonspecific process
Cytoplasmic proteins are degraded in a slow, continuous process under normal physiologic conditions
Small cytoplasmic soluble proteins are internalized by invagination of the lysosomal membrane
Microautophagy
the action or process of being turned inside out or folded back on itself
invagination
is a selective process of protein degradation
This process is activated during nutrient deprivation and responsible for the degradation of approximately 30% of cytoplasmic proteins in organs such as the liver and kidney
Chaperone-mediated autophagy
Chaperone-mediated autophagy requires assistance from specific cytosolic chaperones such as heat-shock chaperone protein called
hsc73
Secondary lysosome) 0.2 - 2 UM
active organelles, are generally somewhat larger and have more heterogenous appearance in the TEM because of the wide variety of materials they may be digesting
Heterolysosomes
a debris-filled vacuole resulting from hydrolytic breakdown of the contents of lysosomes
Normal feature of cell aging
Can accumulate as lipofuscin (Lipid-containing residual of lysosomal digestion)
Residual body
Residual body is also known as
Telolysosomes
are cause by pathologic accumulation of undigested substrate in residual bodies due to absence of certain lysosomal enzymes
Lysosomal storage diseases
- lysosomal membrane mutation
Accumulation of autophagic vacuole
Danon disease
Lack of lysosomal acid lipase
lipid product will accumulate (ex. cholestera esters, TAG (Trigylcerol))
Wolman disease
absence of lipids
deficiency of Gluco-cerebrosidase
Gaucher disease
lipids accumulate in brain cells
B-Hexoaminodase A deficiency
Tay-Sachs disease
build up of harmful amount of lipids
B-hexoaminodase deficiency
Sandhoff disease
abnormal amount of lipids build up
Sphinomyelinase deficiency
Niemann-pick disease
absence of a-1-4 glucosidase
glycogen will aggravate
Pompe disease
no protein aspartoacylase
Canavan disease
lysosomal membrane problem
Accumulation of cysteine
Cystinosis
Break songs:
Bibingka
Leaves
Araw-araw
protein destruction
is used by cells to destroy abnormal proteins that are misfolded, denaturated, or contain abnormal amino acids
Proteasome-mediated degradation
It also degrades normal short-lived regulatory proteins that need to be rapidly inactivated and degraded such as mitotic cyclins that regulate cell-cycle progression, transcriptional factors, tumor suppressors, or tumor promoters
Proteasome-mediated degradation
Individual ubiquitin molecules are activated by:
E1 - ubiquitin activating enzymes
E2 - ubiquitin conjugating enzymes
E3 - ubiquitin protein-ligase enzymes
how many molecule of ubiquitin to gave a ubiquitin chain
4
occurs when Ubiquitin molecules are attached end-to-end to a single lysine residue on a substrate protein to form a poly-ubiquitin chain
Polyubiquitination
Malfunction of proteasome-mediated degradation:
- Loss of proteasome function because of mutations in the system of ubiquitin (once magkaroon ng ubiquitin) activating enzymes that leads to a decrease in protein degradation and their subsequent accumulation in the cell cytoplasm
- Accelerated degradation of proteins by overexpressed proteins involved in system
convoluted membranous network
Extends from the surface of the nucleus to the cell membrane
Rough Endoplasmic Reticulum
RER encloses a series of intercommunicating channels and sac, called _______
With the TEM, the rER appears as a series of interconnected, membrane-limited, flattened sacs membrane called ______ with particles studding the exterior surface of the
cisternae
Functions of RER
- synthesis and segregation of proteins not - -
- destined for the cytosol
- initial glycosilation of glycoproteins
- posttranslational modification of newly formed polypeptide
- assembly of multichain proteins
The protein synthetic system of the cell:
Rough Endoplasmic Reticulum
Ribosomes
The cytoplasm of a variety of cells engaged chiefly in protein synthesis are ________ due to presence of RNA
basophilic
The ________ in secretory cells is the light microscopic image of the organelle called the rough endoplasmic reticulum (ER)
ergastoplasm
portion of the cells that stains with basic dye
Ergastoplasm
Protein synthesis the two processes:
Transcription
Translation
production of proteins by the cell begins within the nucleus in which the genetic code for a protein is transcribed from DNA to pre-mRNA then to mRNA after post- transcriptional modifications
Transcription
in which the coded message contained in the mRNA is read by ribosomal complexes to form a polypeptide
Translation
many ribosomes are formed by binding of single cytoplasmic mRNA to many ribosomes
Polyribosome complex
can translate single mRNA
- Can produce many copies of protein
Attach to the cytoplasmic surface of rER
Polyribosome complex
Polyribosome complex is also known as
polysomes
renders the rER unable to export 1-antitrypsin (A1AT), a single amino acid substitution
This leads to decreased activity of A1AT in the blood and lungs and abnormal deposition of defective A1AT within the rER of liver hepatocytes, resulting in emphysema (COPD) and impaired liver function.
alpha-1-antitrypsin deficiency (A1AT)