Phylogenetic Trees Flashcards
phylogenetic tree
graphical summaries of the ancestor-descendent relationship among species (or populations)
branch
represents a population through time
root
most ancestral branch on the tree
node
point within a tree where a branch splits into two or more branches
nodes represent
MRCA - most recent common ancestor
tip
living or extinct taxa
sister taxa
any taxa derived from a common ancestral node
polytomy
node with more than two descendent branches
polytomy indicates
not enough information to determine which taxa are more closely related
monophyletic group (clade)
ancestral group and all of its descendents (use snip test)
how to determine which species are most closely related
taxa that share more recent common ancestor
outgroup
species that is closely related to a group in study but not part of it
ancestral trait
characteristic of the outgroup
derived trait
modified trait from the outgroup
synapomorphies
shared derived traits
homoplasy
similarity in organisms due to reasons other than common ancestry (trait derives separately)
convergent evolution
when two species or populations independently evolve the same trait
analogous traits
functionally similar but independent evolutionary origin
homology
similarity in organisms due to common ancester
loss
a derived trait undergoes a reversal to the ancestral character
SINEs
short interspaced nuclear elements - type of transposable element
how are SINEs good evidence for phylogenies
chance of inserting SINE at exact same place is very low - species with SINE at same location share ancestry
adaptive radiation
single lineage that leads to a diverse group of new species that are adapted to different habitats
adaptive radiations have single
ancestral species - make a monophyletic group
adaptive radiation indicates diversification from a
single origin
adaptive radiations show rapid
speciation - small populations lead to opportunities for isolation
adaptive radiations impact ecosystem by
filling many niches, having different roles in the ecosystem (evological diversification)
adaptive radiation triggered by
ecological opportunity
ways of taking advantage of ecological opportunity
invasive species, pioneer species, morphological innovations
invasive species
new to an area - lack of natural predators
pioneer species
first to be able to take advantage of an unused resource
morphological innovation
development of new skill (ex. angiosperms)