Phylogenetic Trees Flashcards

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1
Q

phylogenetic tree

A

graphical summaries of the ancestor-descendent relationship among species (or populations)

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2
Q

branch

A

represents a population through time

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3
Q

root

A

most ancestral branch on the tree

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4
Q

node

A

point within a tree where a branch splits into two or more branches

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5
Q

nodes represent

A

MRCA - most recent common ancestor

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6
Q

tip

A

living or extinct taxa

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7
Q

sister taxa

A

any taxa derived from a common ancestral node

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8
Q

polytomy

A

node with more than two descendent branches

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9
Q

polytomy indicates

A

not enough information to determine which taxa are more closely related

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10
Q

monophyletic group (clade)

A

ancestral group and all of its descendents (use snip test)

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11
Q

how to determine which species are most closely related

A

taxa that share more recent common ancestor

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12
Q

outgroup

A

species that is closely related to a group in study but not part of it

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13
Q

ancestral trait

A

characteristic of the outgroup

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14
Q

derived trait

A

modified trait from the outgroup

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15
Q

synapomorphies

A

shared derived traits

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16
Q

homoplasy

A

similarity in organisms due to reasons other than common ancestry (trait derives separately)

17
Q

convergent evolution

A

when two species or populations independently evolve the same trait

18
Q

analogous traits

A

functionally similar but independent evolutionary origin

19
Q

homology

A

similarity in organisms due to common ancester

20
Q

loss

A

a derived trait undergoes a reversal to the ancestral character

21
Q

SINEs

A

short interspaced nuclear elements - type of transposable element

22
Q

how are SINEs good evidence for phylogenies

A

chance of inserting SINE at exact same place is very low - species with SINE at same location share ancestry

23
Q

adaptive radiation

A

single lineage that leads to a diverse group of new species that are adapted to different habitats

24
Q

adaptive radiations have single

A

ancestral species - make a monophyletic group

25
Q

adaptive radiation indicates diversification from a

A

single origin

26
Q

adaptive radiations show rapid

A

speciation - small populations lead to opportunities for isolation

27
Q

adaptive radiations impact ecosystem by

A

filling many niches, having different roles in the ecosystem (evological diversification)

28
Q

adaptive radiation triggered by

A

ecological opportunity

29
Q

ways of taking advantage of ecological opportunity

A

invasive species, pioneer species, morphological innovations

30
Q

invasive species

A

new to an area - lack of natural predators

31
Q

pioneer species

A

first to be able to take advantage of an unused resource

32
Q

morphological innovation

A

development of new skill (ex. angiosperms)