mutations mod32 Flashcards

1
Q

What are tautomer shifts

A

when the protons shift forming a rare form so a base analog

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2
Q

What is the rare imino base pairing

A

A:C

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3
Q

what is the rare enol base pairing

A

G:T

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4
Q

what is the effect of mismatched base pairs for rare imino

A

A:C base pairing results in C:G base pair sub

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5
Q

What is the effect of mismatched base pairs for rare enol

A

G:T base pairing results in T:A base pair

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6
Q

what factors influence the rate of spontaneous mutations

A

accuracy of the dna replication

efficiency of dna repair

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7
Q

what are the 2 types of chemical mutagens

A

Mutagenic to only replicating dna and mutagenic to both replicating and nonreplicating

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8
Q

what are the chemicals that are mutagenic only to replicating DNA

A

Base analogs and Acridines

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9
Q

what are the chemicals that are mutagenic to both replicating and non

A

Alkylating agents, deaminating agents and hydroxylating agents

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10
Q

Name the 2 base analogs

A

5 bromouracil BU

2 Aminopurine AP

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11
Q

name the acridine

A

Proflavin

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12
Q

Name a deaminating agent

A

Nitrous Acid

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13
Q

Name the hydroxylating agent

A

Hydroxylamine

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14
Q

Base analogs increase the likelihood of what happening

A

Mispairing

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15
Q

5 bromouracil is an analog of what base

A

Thymine

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16
Q

structure of 5 bromouracil

A

Br at position 5 instead of CH3

17
Q

Br increases frequency of what

A

Tautomeric shifts

18
Q

what does the following forms of 5BU pair with

1) stable keto form
2) instable enol form

A

1) pairs A

2) pairs G

19
Q

What is the mutagenic effect of 5BU

A

Transition

20
Q

When 5BU is present in its less frequent enol form, what happens

A

Induces G:C –> A:T

21
Q

When 5BU is present in its common keto form, what happens

A

A:T –> G:C

22
Q

Acridine dyes like proflavin cause what

A

Frameshift mutations

23
Q

Proflavin affects the double helix in what way and how?

A

increases rigidity and alters conformation because proflavin gets in between the base pairs in DNA

24
Q

What do alkylating agents do

A

add alkyl groups to base CH3

25
What do deaminating agents do
Remove NH2 from bases
26
Hydroxylamine does what
hydroxylates the amino group of cytosine and leads to G:C --> A:T transitions
27
Hydroxylamine is useful in classifying what
transition mutations
28
For lung cancer, what genes are mutated
Several anti cancer genes and chromosomes
29
How do Xrays and UV light induce mutations
Xrays - through ionisation | UV - through excitation (non ionizing radiation)
30
X rays can specifically mutate how
Breaks chromosomes, cause deletions, duplication, inversions and translocations
31
The increased what of atoms present in DNA is responsible for most mutagenicity ( Radiation)
The increased reactivity of atoms present in DNA molecules is responsible for most of the mutagenicity
32
what are the products of DNA that has absorbed UV radiation
Pyrimidine hydrates and pyrimidine dimers
33
what is a pyrimidine hydrate
UV + H20 = extra OH on the base
34
What is pyrmidine dimer
Two pyrimidine joined together
35
hydrolysis of cytosine to a hydrate causes what
mispairing during replicaton
36
Thymine dimers do what
block DNA replication and activate error-prone DNA repair mechanisms
37
UV can be used beneficially how
used to sterilise surface by inducing formation of thymine dimers which block dna replication