mutations mod32 Flashcards

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1
Q

What are tautomer shifts

A

when the protons shift forming a rare form so a base analog

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2
Q

What is the rare imino base pairing

A

A:C

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3
Q

what is the rare enol base pairing

A

G:T

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4
Q

what is the effect of mismatched base pairs for rare imino

A

A:C base pairing results in C:G base pair sub

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5
Q

What is the effect of mismatched base pairs for rare enol

A

G:T base pairing results in T:A base pair

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6
Q

what factors influence the rate of spontaneous mutations

A

accuracy of the dna replication

efficiency of dna repair

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7
Q

what are the 2 types of chemical mutagens

A

Mutagenic to only replicating dna and mutagenic to both replicating and nonreplicating

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8
Q

what are the chemicals that are mutagenic only to replicating DNA

A

Base analogs and Acridines

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9
Q

what are the chemicals that are mutagenic to both replicating and non

A

Alkylating agents, deaminating agents and hydroxylating agents

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10
Q

Name the 2 base analogs

A

5 bromouracil BU

2 Aminopurine AP

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11
Q

name the acridine

A

Proflavin

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12
Q

Name a deaminating agent

A

Nitrous Acid

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13
Q

Name the hydroxylating agent

A

Hydroxylamine

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14
Q

Base analogs increase the likelihood of what happening

A

Mispairing

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15
Q

5 bromouracil is an analog of what base

A

Thymine

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16
Q

structure of 5 bromouracil

A

Br at position 5 instead of CH3

17
Q

Br increases frequency of what

A

Tautomeric shifts

18
Q

what does the following forms of 5BU pair with

1) stable keto form
2) instable enol form

A

1) pairs A

2) pairs G

19
Q

What is the mutagenic effect of 5BU

A

Transition

20
Q

When 5BU is present in its less frequent enol form, what happens

A

Induces G:C –> A:T

21
Q

When 5BU is present in its common keto form, what happens

A

A:T –> G:C

22
Q

Acridine dyes like proflavin cause what

A

Frameshift mutations

23
Q

Proflavin affects the double helix in what way and how?

A

increases rigidity and alters conformation because proflavin gets in between the base pairs in DNA

24
Q

What do alkylating agents do

A

add alkyl groups to base CH3

25
Q

What do deaminating agents do

A

Remove NH2 from bases

26
Q

Hydroxylamine does what

A

hydroxylates the amino group of cytosine and leads to G:C –> A:T transitions

27
Q

Hydroxylamine is useful in classifying what

A

transition mutations

28
Q

For lung cancer, what genes are mutated

A

Several anti cancer genes and chromosomes

29
Q

How do Xrays and UV light induce mutations

A

Xrays - through ionisation

UV - through excitation (non ionizing radiation)

30
Q

X rays can specifically mutate how

A

Breaks chromosomes, cause deletions, duplication, inversions and translocations

31
Q

The increased what of atoms present in DNA is responsible for most mutagenicity ( Radiation)

A

The increased reactivity of atoms present in DNA molecules is responsible for most of the mutagenicity

32
Q

what are the products of DNA that has absorbed UV radiation

A

Pyrimidine hydrates and pyrimidine dimers

33
Q

what is a pyrimidine hydrate

A

UV + H20 = extra OH on the base

34
Q

What is pyrmidine dimer

A

Two pyrimidine joined together

35
Q

hydrolysis of cytosine to a hydrate causes what

A

mispairing during replicaton

36
Q

Thymine dimers do what

A

block DNA replication and activate error-prone DNA repair mechanisms

37
Q

UV can be used beneficially how

A

used to sterilise surface by inducing formation of thymine dimers which block dna replication