Module 3 Flashcards

1
Q

_______ molecules are those that contain carbon.

A

Organic

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2
Q

Organic molecules are more complex and generally larger than ________ molecules.

A

inorganic

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3
Q

What are 5 examples of organic molecules?

A
  1. carbohydrates
  2. lipids
  3. proteins
  4. nucleic acids (DNA, RNA)
  5. adenosine triphosphate
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4
Q

Carbon always makes _____ bonds because it always has ____ electrons available in it’s valence shell.

A

4 (for both)

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5
Q

Carbon-containing compounds exist in many ______; the same number of carbon, nitrogen, oxygen, sulfur, and hydrogen atoms can make thousands of different compounds.

A

isomers

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6
Q

An _____ is just a rearranged form of the same molecules. In other words, same molecular formula, different structure.

A

isomer

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7
Q

_____ groups are found where an oxygen uses each of its two allowed bonds in a single covalent bond with carbons, one on each side.

A

Ester

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8
Q

Oxygen and Sulfur are both in group VI of the periodic table. That means they both have a valence of -2, meaning they can form 2 bonds, If one bond is to a hydrogen, then we call these _________ or _______ groups.

A

hydroxyl (-OH);

sulfhydryl (-SH)

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9
Q

Just as there are common groupings of inorganic atoms into polyatomic ions organic compounds contain common groupings. These arrangements that are commonly found in carbon-containing molecules are called ______________.

A

functional groups

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10
Q

_______ groups and _______ groups are both important parts of amino acids.

A

Carboxyl;

Amino

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11
Q

_______ refers to the amino (nitrogen-containing group), which acts as a base, attracting hydrogen ions.

A

Amino

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12
Q

_____ refers to the carboxylic acid (-COOH) group, which has a wandering hydrogen.

A

Acid

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13
Q

The _______ is formed from reaction of acid and alcohol. It is found in fats, oils, also nerve chemical acetylcholine.

A

Ester group

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14
Q

The _______ is the same as in bases. It is found in alcohols ad sugars. It makes organic molecules water-soluble.

A

Hydroxyl group

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15
Q

The ______ is an organic acid. It is usually charged at cellular pH.

A

Carboxyl group

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16
Q

________ groups are formed from a phosphorus atom making a double covalent bond to one oxygen and a single covalent bond to 3 others.

A

Phosphate

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17
Q

________ acts as a base. It binds to H+ at cellular pH.

A

Amino groups

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18
Q

Amino + carboxyl in the same molecule is an ________.

A

amino acid

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19
Q

Phosphate groups are found in energy storing molecules and in _________.

A

nucleic acids (DNA, RNA)

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20
Q

A carbon which forms a double covalent bond to an oxygen (the general name is carbonyl) is called a _______ if it’s in the middle of a molecule or an ________ if it’s at the end.

A

ketone;

aldehyde

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21
Q

_________ contain carbon and oxygen in a double covalent bond. It is found in ketones and part of the water-loving group.

A

Carbonyl group

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22
Q

________ are formed when fats are broken down.

A

Ketones

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23
Q

________ is like hydroxyl, but with sulfur instead of oxygen. It is an important protein structure.

A

Sulfhydryl group

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24
Q

What are the 4 main kinds of biological molecules?

A
  1. carbohydrates
  2. lipids (fats)
  3. proteins
  4. nucleic acids
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25
Q

_________ are “watered carbon”. Always one carbon plus one water.

A

carbohydrates

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26
Q

_______ are more carbon than oxygen and repels water (hydrophobic).

A

lipids (fats)

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27
Q

______ are made up of amino acids.

A

Proteins

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28
Q

_________ always contain carbon, hydrogen, oxygen, and nitrogen. Some, also, include sulfur.

A

Amino acids

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29
Q

__________ are the sugar “backbone” plus nitrogenous base, Deoxyribose backbone, and Ribose backbone.

A

Nucleic acids

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30
Q

Biological molecules exist as ________ and ________.

A

monomers and polymers

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31
Q

Monomer = _______ unit.

A

one

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32
Q

Many units strung together = __________.

A

polymer

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33
Q

Polymers are ______ strung together.

A

monomers

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34
Q

A carbohydrate is a simple sugar (___________) such as glucose.

A

monosaccharide

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35
Q

A protein monomer is an _______ ________.

A

amino acid

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36
Q

A nucleic acid monomer is a ________.

A

nucleotide

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37
Q

_______ is a dimer (2 monomers) of the sugar monomers, ________ and ________.

A

glucose and fructose

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38
Q

Polymers of amino acids are ________ and ________.

A

polypeptides and proteins

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39
Q

Polymers of nucleotides are the ________ ________ (____) and ________ _______ (____).

A

deoxyribonucleic acids (DNA) and ribonucleic acid (RNA)

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40
Q

1 Dalton = 1 ____________.

A

atomic mass unit

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41
Q

Carbohydrates include ___ or ___ carbons.

A

5 or 6

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42
Q

What is always the ratio of carbon to hydrogen to oxygen in carbohydrates?

A

1:2:1

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43
Q

Carbohydrates are drawn in which 2 ways?

A

as a string and as a ring or carbons with oxygens, hydrogens, and hydroxyl groups attached.

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44
Q

The rings of carbohydrates can join by a process called _________ _________.

A

dehydration synthesis

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45
Q

Five-carbon sugars are called ________.

A

Pentoses

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46
Q

Six-carbon sugars are called ________.

A

Hexoses

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47
Q

Ribose and Deoxyribose are ________.

A

pentoses

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48
Q

Glucose, Fructose, and Galactose are _______.

A

hexoses

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49
Q

__________ are simple sugars that contain 3 to 7 carbon atoms.

A

Monosaccharides

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50
Q

______ is the main blood sugar.

A

Glucose

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51
Q

______ is the sugar found in fruits.

A

Fructose

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52
Q

______ is a component of milk sugar.

A

Galactose

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53
Q

_______ is a sugar found in DNA.

A

Deoxyribose

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54
Q

_______ is a sugar found in RNA.

A

Ribose

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55
Q

_______ are two monosaccharides joined together, and are the simplest kind of sugar polymers. These are simple sugars formed from the conbination of two monosaccharides by dehydration synthesis.

A

Disaccharides

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56
Q

_________ are larger polymers of monosaccharides. These are tens to hundreds of monosaccharides joined by dehydration synthesis.

A

Polysaccharides

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57
Q

Sucrose = _______ + _________

A

glucose + fructose

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58
Q

Lactose = ________ + _________

A

glucose + galactose

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59
Q

Maltose = ________ + _________

A

glucose + glucose

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60
Q

_______ is the stored form of carbohydrates in animals.

A

Glycogen

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61
Q

_______ is the stored form of carbohydrates in plants and main carbohydrate in food.

A

Starch

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62
Q

_________ is part of cell walls in plants that cannot be digested by humans but aids movement of food through the intestines.

A

Cellulose

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63
Q

Hexoses are a _____ source.

A

food

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64
Q

Pentoses are essential for the structure of ____ and ____.

A

DNA and RNA

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65
Q

Human cells prefer ______ as a source of energy.

A

glucose

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66
Q

The opposite process of dehydration synthesis is called ________; a water molecule is added to sucrose as it is broken into glucose and fructose.

A

hydrolysis

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67
Q

Hydrolysis of sucrose is catalyzed by an enzyme called ________.

A

invertase (aka: sucrase)

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68
Q

When glucose is plentiful, it is converted by the ______ to glycogen, which is stored in the liver and muscles.

A

liver

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69
Q

The synthesis of _________ is when 3 fatty acids are added to glycerol backbone by dehydration synthesis.

A

triglycerides (tri = 3)

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70
Q

In proteins, the bonds that hold amino acid monomers together are formed from dehydration reactions that each create a __________.

A

peptide bond

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71
Q

This type of lipid is used to synthesize triglycerides and phospholipids or catabolized to generate adenosine triphosphate (ATP).

A

fatty acids

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72
Q

This type of lipid is used for protection, insulation, and energy storage.

A

triglycerides (fats and oils)

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73
Q

This type of lipid is a major lipid component of cell membranes.

A

phospholipids

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74
Q

Cholesterol, Bile salts, vitamin D, adrenocorticol hormones, and sex hormones are all components of what type of lipid?

A

Steroids

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75
Q

This suptype of lipids is a minor component of all animal cell membranes; precursor of bile salts, vitamin D, and steroid hormones.

A

Cholesterol

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76
Q

This subtype of lipids is needed for digestion and absorption of dietary lipids.

A

bile salts

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77
Q

This subtype of lipids helps regulate calcium level in the body and is needed for bone growth and repair.

A

vitamin D

78
Q

This subtype of lipids helps regulate metabolism, resistance to stress, and salt and water balance.

A

adrenocorticol hormones

79
Q

This subtype of lipids stimulates reproductive functions and sexual characteristics.

A

sex hormones

80
Q

This type of lipid has diverse effects on modifying responses to hormones, blood clotting, inflammation, immunity, stomach acid secretion, airway diameter, lipid breakdown, and smooth muscle contraction.

A

Eicosanoids (prostaglandins and leukotrienes)

81
Q

This lipid is needed for synthesis of vitamin A, which is used to make visual pigments in the eyes and also functions as antioxidants.

A

Carotenes

82
Q

This lipid promotes wound healing, prevents tissue scarring, contributes to the normal structure and function of the nervous system, and functions as an antioxidant.

A

Vitamin E

83
Q

This lipid is required for synthesis of blood-clotting proteins.

A

Vitamin K

84
Q

This lipid transports lipids in the blood, carry triglycerides and cholesterol to tissues, and removes excess cholesterol from the blood

A

lipoproteins

85
Q

______ consist of carbon, hydrogen, and oxygen. They have different proportions than carbohydrates (less oxygen). They tend to be hydrophobic or non-polar. Is used to build cell membranes.

A

Lipids

86
Q

________ means repel water.

A

hydrophobic

87
Q

_______ molecules are charged ions and like being around water.

A

polar

88
Q

___________ molecules are not charged ions and hate being around water.

A

non-polar

89
Q

______ means that it likes being around water.

A

hydrophillic

90
Q

Lipids combined with ________ atoms make up compound lipids.

A

phosphorus

91
Q

Lipid are found in association with protein carriers in the blood (__________).

A

lipoproteins

92
Q

Vitamin A is important in ______.

A

vision

93
Q

Vitamin D is important in ____________.

A

bone formation

94
Q

Vitamin E is a __________ molecule.

A

protective

95
Q

Vitamin K in important in _________.

A

blood clotting

96
Q

_____ _____ are the basic building blocks of lipids.

A

fatty acids

97
Q

______ fatty acids are those where all the carbons are filled, or saturated, with the maximum number of hydrogen atoms it can bind with.

A

Saturated

98
Q

When double bonds form between carbon atoms, fewer hydrogens can bond to carbons and an ________ fatty acid results.

A

unsaturated

99
Q

Cell membranes are made up of __________.

A

phospholipids

100
Q

Phospholipids have a hydrophillic “_____” group.

A

head

101
Q

Phospholipids have a hydrophobic “______” group.

A

tail

102
Q

________ heads associate with water.

A

Hydrophillic

103
Q

________ tails associate with each other.

A

Hydrophobic

104
Q

Phospholipid molecules are _________ because most electrons from hydrogen atoms are in a stable relationship with carbon atoms.

A

amphipathic

105
Q

Hydrophilic and ______ are used interchangeably.

A

polar

106
Q

Hydrophobic and ______ are used interchangeably.

A

non-polar

107
Q

_____ ______ are mostly made up of lipid bilayers.

A

cell membranes

108
Q

_______ are lipids derived from arachidonic acid that are key chemicals in immune defense and inflammation.

A

Eicosanoids

109
Q

The monomer which makes up proteins is called ________.

A

amino acid

110
Q

Strings of amino acids are called __________.

A

polypeptides

111
Q

Proteins are _______ of amino acids joined by dehydration synthesis.

A

polymers

112
Q

Amino acids have a simple structure: _______ and a _________ form the backbone.

A

2 carbons and a nitrogen

113
Q

What is a shorthand way to write the carboxyl group?

A

-COOH

114
Q

An amino acid has 3 parts, each attached to a carbon and hydrogen atom (-CH). What are the parts?

A
  1. Amino (base) group
  2. Carboxyl (acid) group
  3. R group
115
Q

Polymers of amino acids are formed through the _________.

A

peptide bonds

116
Q

The resulting combination of two amino acids is called a __________.

A

dipeptide

117
Q

More than two amino acids is called a _______.

A

polypeptide

118
Q

Larger polypeptide are called ________, but there is no distinct line between the two.

A

proteins

119
Q

_________: two amino acids, one peptide bond

A

Dipeptide

120
Q

_________: three amino acids, two peptide bonds.

A

Tripeptide

121
Q

_________: lots of amino acids, lots of peptide bonds.

A

Polypeptide

122
Q

Average amino acid = ________ molecular weight.

A

100 Da

123
Q

Proteins are syntheisized in a specialized cell machine called a ________.

A

ribosome

124
Q

Enzymes called _______ or _________ break peptide bonds by hydrolysis. This is what is happening in your gastrointestinal tract when you digest proteins.

A

peptidases or proteases

125
Q

_____ is just shorthand for a chemical grouping (can be simple or complex).

A

R

126
Q

The 20 amino acids all have one ____ (_____) and and one ______ (_____) end.

A

amino (-NH2) and carboxyl (-COOH)

127
Q

The simplest amino acid is ______.

A

glycine

128
Q

Is serine hydrophilic or hydrophobic?

A

Hydrophilic

129
Q

Is Threonine hydrophilic or hydrophobic?

A

hydrophilic

130
Q

Is Gluatmine hydrophilic or hydrophobic?

A

hydrophilic

131
Q

Is Asparagine hydrophilic or hydrophobic?

A

hydrophilic

132
Q

Is Tyrosine hydrophilic or hydrophobic?

A

hydrophilic

133
Q

Is Serine polar or nonpolar?

A

polar

134
Q

Is Threonine polar or nonpolar?

A

polar

135
Q

Is Glutamine polar or nonpolar?

A

polar

136
Q

Is Asparagine polar or nonpolar?

A

polar

137
Q

Is Tyrosine polar or nonpolar?

A

polar

138
Q

Is Alanine hydrophilic or hydrophobic?

A

hydrophobic

139
Q

Is Valine hydrophilic or hydrophobic?

A

hydrophobic

140
Q

Is Leucine hydrophilic or hydrophobic?

A

hydrophobic

141
Q

Is Isoleucine hydrophilic or hydrophobic?

A

hydrophobic

142
Q

Is Methionine hydrophilic or hydrophobic?

A

hydrophobic

143
Q

Is Phenylalanine hydrophilic or hydrophobic?

A

hydrophobic

144
Q

Is Tryptophan hydrophilic or hydrophobic?

A

hydrophobic

145
Q

Is Alanine polar or nonpolar?

A

nonpolar

146
Q

Is Valine polar or nonpolar?

A

nonpolar

147
Q

Is Leucine polar or nonpolar?

A

nonpolar

148
Q

Is Isoleucine polar or nonpolar?

A

nonpolar

149
Q

Is Methionine polar or nonpolar?

A

nonpolar

150
Q

Is Phenylalanine polar or nonpolar?

A

nonpolar

151
Q

Is Tryptophan polar or nonpolar?

A

nonpolar

152
Q

What are the 4 levels of protein structure?

A
  1. Primary
  2. Secondary
  3. Tertiary
  4. Quaternary
153
Q

The ______ structure of protein is the order in which amino acids are strung together with peptide bonds.

A

Primary

154
Q

The _________ structure of protein is how the sequence is folded.

A

secondary

155
Q

The primary structure may be twisted or folded into a ___________ structure.

A

secondary

156
Q

Hair is formed from the protein, _________.

A

keratin

157
Q

Each ______ molecule is a sequence of amino acids twisted into an alpha helix.

A

keratin

158
Q

What are the 2 types of secondary protein structure?

A
  1. alphs helices

2. beta pleated sheets

159
Q

___________ are found in many proteins in nature (such as spider silk) but are less common in the human body.

A

Beta pleated sheets

160
Q

______ diagrams are a common way to represent protein structure.

A

“Ribbon”

161
Q

Alpha helices are illustrated as _______.

A

coils

162
Q

Beta pleated sheets are illustrated as ______.

A

arrows

163
Q

Amino acids that don’t have secondary structure are _______.

A

threads

164
Q

The ______ structure of protein is how helices or sheets are arranged in three dimensions (3D).

A

Tertiary

165
Q

The _______ structure of protein is the arrangement of multiple 3D structures into a functional protein.

A

Quaternary

166
Q

What are the types of atomic interactions leading to tertiary structure?

A
  1. Ionic bonds
  2. Hydrophobic interactions
  3. Van der Waals interactions
  4. Disulfide bridges
  5. Hydrogen bonds
167
Q

______ _______ are formed when positive and negative charges attract each other.

A

Ionic bonds

168
Q

_______ _______ occur where non-polar groups snuggle up to each other, excluding water.

A

Hydrophobic interactions

169
Q

___________ are not very well understood. As far as we know, these occur when the “shapes” of molecules fit each other like puzzle pieces.

A

Van der Waals interactions

170
Q

_______ _______ are formed between cysteines. Cysteines are the only amino acid with an -SH group.

A

Disulfide bridges

171
Q

______ ______ are formed between hydrogens bound to O, N, or S and adjacent O, N, or S atoms.

A

hydrogen bonds

172
Q

The ____ _____ is an iron-containing group which holds onto the oxygen molecule.

A

heme group

173
Q
Which of the following are proteins?
A. actin 
B. myosin 
C. triglyceride 
D. hemoglobin 
E. testosterone 
F. enzyme 
G. sucrose
A

A. actin
B. myosin
C. hemoglobin

174
Q

What is the building block of proteins?

A

Amino acids

175
Q

What is the building block of triglycerides?

A

glycerol and fatty acids

176
Q

What is the building block of carbohydrates?

A

monosaccharides

177
Q

What is the building block of nucleic acid?

A

nucleotides

178
Q

Water molecules are polar because __________.

A

2 electron pairs are unevenly distributed between oxygen and hydrogen

179
Q

What is the chemical reaction of an enzyme?

A

deceases the activation energy

180
Q

What is the chemical reaction of temperature?

A

measurement of molecular motion

181
Q

What is the chemical reaction of concentration?

A

number of molecules per unit volume

182
Q

What is the chemical reaction of substrate?

A

target of an enzyme

183
Q

What is the chemical reaction of catabolic reaction?

A

dehydration synthesis

184
Q

What is the chemical reaction of anabolic reaction?

A

hydrolysis

185
Q

What is the chemical reaction of stored energy?

A

ATP

186
Q

Blood types A, B and O differ in the:
A. amino acid –R groups
B. number and pattern of carbohydrate molecules attached to a lipid “anchor”
C. number of fatty acids attached to a glycerol backbone
D. primary sequence of amino acids

A

B. number and pattern of carbohydrate molecules attached to a lipid “anchor”

187
Q

The amino acid cysteine is the only amino acid with a sulfhydryl group. As a result, cysteine residues are found wherever proteins form a _____________ bond.

A

disulfide

188
Q

There are 20 different amino acids. How many -R groups are there?

A

20

189
Q

There are several different levels of organization of protein molecules. Van der Waals forces, disulfide bridges (Cys–S–S–Cys) and hydrogen bonds between protein chains help maintain the ________ structure.

A

secondary

190
Q

The complete, functional signaling protein insulin consists of three A chains and three B chains. This is an example of ________ structure.

A

quaternary

191
Q

Proteins in the diet are broken down into amino acids, dipeptides, and tripeptides in the digestive system. These smaller molecules are mostly used to make:

A

new proteins