Mod 1: Histo and Cell Bio Flashcards
Components of plasma membrane
Phospholipids
Cholesterol
Proteins (integral and peripheral)
Oligosaccharides
TEM: proteins fixed with
lipids fixed with
proteins: glutaraldehyde
lipids: osmium tetroxide
Functions of plasma membrane
- Communication: receptors
- Intercellular connection: flexible boundary, protects cellular contents, supports cell structure
- Physical barrier: separates inside from outside
- Selective permeability
Functions of integral membrane proteins
Pumps Channels Receptors Linkers Enzymes Structural
Types of channel proteins
Voltage gated (neurons) Ligand gated (specific protein binds) Stress activated (hypoxia, temp, etc)
Types of vesicular transport
Exocytosis
Endocytosis
Types of endocytosis
Phagocytosis Pinocytosis (constitutive) Receptor-mediated endocytosis
Pathway of side chain cleavage of steroid hormone synthesis
Cholesterol
Pregnalone (via desmolase)
Progesterone, aldosterone, testosterone
Autophagy
proteins, organelles, and other cellular structures degraded in lysosomal compartment – prevents cell death
Mitophagy
selective degradation of mitochondria by autophagy. It often occurs to defective mitochondria following damage or stress
Ecto vs. endoplasm
Ecto: area of cytoplasm w/o organelles
Endo: area of cytoplasm w/ organelles
Polyribosomes
ribosomes associated with mRNA
–occur in cytosol or RER membranes
What proteins synthesized by RER?
albumin hormones milk proteins receptors antibodies collagen enzymes lipoproteins
Microsomes
don’t exist in cell life, only in lab
Homogenize organelles, centrifuge –> create microsomes
Use antibody against protein of interest/radioactive aa (Met)
Used to determine rate of protein synthesis, half life of protein
SER AKA …
In what cells
Sarcoplasmic reticulum in muscle cells
4 major tissue types
epithelial
connective
muscle
neuronal
Hypertrophy
Atrophy
hypertrophy: cell size inc can result in inc organ size
atrophy: cell size dec can result in dec tissue/organ size
Hyperplasia
inc in cell numbers/cell density –> cell proliferation
Dysplasia
mature cell types are displaced by inc numbers of IMMATURE cells of the SAME type
Metaplasia
mature cell types are displaced by inc numbers of MATURE cells of a DIFF type
Anaplasia
reversion of cells to more primitive or de-differentiated form
Neoplasia
pathological process that results in the formation and growth of a neoplasm/tumor, which may be benign or malignant
Benign
abnormal cell prolif is encapsulated or physiologically constrained
metastasis is not possible
cell growth//division is slow and minimally invasive ot proximal tissues
cells do NOT progress to anaplastic state
Malignant
abnormal cell prolif with high deg of invasiveness, anaplasia and metastasis
untreated chromosomal instability inc with time
cells achieve autonomy (induce creation of own blood supply while repelling immune sys function)
Carcinoma
malignant neoplasm that originates from EPITHELIAL tissue
Adenocarcinoma
malignant neoplasm that originates form GLANDULAR EPITHELIAL tissue
Sarcoma
malignant neoplasm that originates from NON-EPITHELIAL source tissue
Changes in cellular architecture
hypertrophy atrophy hyperplasia dysplasia metaplasia anaplasia neoplasia
Loss of cellular architecture
inflammation
necrosis
apoptosis
Inflammation
response to tissue damage
vasodilation of proximal blood vessels
inflitration of proximal tissues by WBCs
(inflammation precedes tissue repair and death)
Necrosis
cell death characterized by loss of plasma membrane integrity
cellular contents released into surrounding tissue and many cause inflammatory response/amplify cell death numbers`
Apoptosis
cell death induced by enzymatic autolysis (caspases), followed by controlled membrane-enclosure of cytoplasmic and nuclear fragments
inflammatory responses are minimized
Intracellular accumulations
lipids proteins glycogen Ca/Ca salts pigments
Intracellular accumulations: lipids
triglycerides
cholesterol
cholesterol esters
(fatty liver, atherosclerosis)
Intracellular accumulations: proteins
normal or abnormal conformations:
protein amyloids
tau proteins associated with neurodegenerative diseases
nemaline crystals (skeletal myopathies)
Intracellular accumulations: glycogen
(genetically acquired glycogen storage disorders – afffects organs that store glycogen)
liver
skeletal and cardiac muscle tissues
Intracellular accumulations: Ca/Ca salts
calcification/deposition of calcium phosphate crystals –> rigidity within cell/membrane
due to pathological release of Ca stores from intracellular storage sites
Intracellular accumulations: pigments
lipofuschin
hemosiderin
melanin
conjugated bilirubin
Extracellular accumulations
collagen
other insoluble proteins
Extracellular accumulations: collagen
excess collagen deposition (AKA fibrosis) can limit gas exchange in lung tissue
can minimize nutritive exchange b/w peripheral tissue cells and vascular supply
Extracellular accumulations: other insoluble proteins
amyloid proteins
tau proteins deposited in proximal extracellular space
Difference b/w organelle and cellular structure
organelle is enclosed in membrane
cellular structure is not (ex. ribosomes)
Cell membrane permeable to…
impermeable to…
Permeable: small gas molec, all non-polar molec
Impermeable (require transport): polar molec (water), charge ions
How can cell membranes differ among cells?
phosphate head group specific fatty acids amount of cholesterol proteins in membrane lipid rafts -- cluster protein receptors for specific ligands
Euchromatin vs heterochromatin
Eu: uncoiled for transcription (less electron dense/lighter)
Hetero:coiled (more electron dense/darker)
Describe nucleolus and processing/protein association of rRNA
Nucleolus: where rRNA is synthesized using DNA from Nuclear Organizing Regions Processing of rRNA occurs in... 1. nuclear organizing region 2. fibrillar region 3. granular region
Difference b/w proteins synthesized in cytoplasm vs. RER
Cytoplasm: remain in cell
RER: export from cell, remain in cell membrane
Presence of abundant RER indicates…
Abundant SER indicates…
RER: protein-secreting cell
–(RER makes proteins to be exported out of cell)
SER: produce lipids, cholesterol
–liver cells, steroid-producing cells
–skeletal and cardiac muscle cells –> store Ca in sarcoplasmic reticulum
Describe location of RER relative to cell
near nucleus
RER continuous with nuclear membrane
Describe diff faces of golgi and where located in relation to cell
Cis/forming face: convex and closest to nucleus
Trans/maturing face: concave and farthest from nucleus
Golgi function
oligosaccharides and polysaccharides synthesized in golgi
sugar chains attached to proteins from RER (glycosylation)
COP I vs COP II
COP I coated vesicles return proteins to RER (from golgi)
COP II coated vesicles direct modified proteins of golgi to appropriate compartment in the transport pathway
How can golgi faces be stained to distinguish them
trans/maturing face becomes dark after thiamine pyrophosphatase rxn
stain cis face with osmium
Mitochondrial fusion occurs…
embryological development
when cells have inc oxidative demands or local environmental stressors
Parkinson’s caused by…
imbalance b/w mitochondrial fusion and fission
Secondary lysosome
form when small primary lysosomes filled with ingested material fuse
How can you tell if a lysosome is active?
internal heterogenous appearance
Peroxisome
degradative organelle
potent oxidases and catalase enzyme
break down products of oxidative metabolism (H2O2)
budding/fission
Peroxisomes can be identified in non-human mammals by…
presence of urate oxidase crystals
Proteasomes located…
Function
located in both the cytoplasm and nucleoplasm function is "targeted" protein degradation (misfolded, viral, no longer necessary proteins tagged with ubiquitin label)
Changes in protein turnover may be indicative of…
Aging (dec)
Disease (dec)
Growth/recovery (inc)
Describe receptor mediated endocytosis with clathrin
ligand binds to receptor
adaptin binds to receptor
clathrin binds to adaptin (clathrin binding deforms membrane inward)
Dynamin constricts apical region to form vesicle
Clathrin and adaptin detach from vesicle and are recycled
Endosome fuses with lysosome
Cytoskeletal elements and what they are made of
Microfilaments (made from actin)
Intermediate filaments (made from keratin and vimentin)
Microtubules (made from tubulin subunits, hollow)
Dynamic properties of cytoskeleton due to…
rapid polymerization/depolymerization (except intermediate filaments)
Terminal web
formed by microfilaments (actin) that are densely concentrated hear the apical membrane
terminal web is meshwork that anchors a variety of membrane proteins, microvilli, and sterovilli
Microvilli formed by what protein subunit?
Cilia and flagella?
Stereocilia?
microvilli: actin
sterocilia: actin
cilia and flagella: microtubules
Intermediate filaments
do NOT undergo rapid polumerization
anchoring fibers for desmosomes (macula adherens)
protective barrier against mechanical damage and surface pathogens
Microtubules
largest diameter
Hollow
Alternating tubulin subunits (alpha and beta)
rapidly polymerize/depolymerize – MTOC (centrosome)
Tubulin subunits added/removed from…
free end (furthest from MTOC)
What motor proteins move along microtubules?
Kinesin: moves organelles AWAY from MTOC
Dynein: moves organelles TOWARD MTOC
How is cilia anchored to plasma membrane?
Describe structure of anchor and cilia
basal body
basal body is derived from MTOC and is comprised of 9-radially arranged triplets of microtubules
cilia structure then changes to 9+2 array (axoneme)
Cilia and flagella are both ensheathed by plasma membrane
Axoneme
9+2 arrangement of cilia and flagella
What cytoskeletal element forms spindle apparatus?
microtubules
How are microtubules arranged at centriole?
nine-triplet arrangement
Explain appearance of glycogen vs. ribosomes
Glycogen forms rosette aggregates (in cytoplasm of liver, skeletal muscle, and cardiac muscle cells)
Ribosomes: smaller than flycogen
Describe interactions of cadherin and other proteins at apical surface
Cadherin (which is Ca dependent) is bound to
Catenin proteins which connect to actin via actin binding proteins (vinculin, formin-1, alpha-actinin)
This protein complex connects to the apical surface of cell –> forms junction to hold cells together
Describe CAM structure
have 2-6 immunoglobulin like domains
Immunoglobulins are not Ca dependent
Major difference b/w cadherin and immunoglobulins
cadherin is Ca dependent
immunoglobulins are not Ca dependent
What happens if you remove Ca from tissues?
cannot be held together b/c cadherin is Ca dependent
Paracellular vs. transcellular pathways
Paracellular: transfer of substances across an epithelium by passing through the intercellular space between the cells
Transcellular: substances travel through the cell, passing through both the apical membrane and basolateral membrane.
What proteins in zonula occludens are the “zip lock bag”
occludin and claudin
Zonula occludens prevent what pathway?
paracellular (b/w cells)
What proteins involved in zonula occludens?
Afadin Nectin JAMS ZO-1 ZO-2 ZO-3 Occludin Claudin
Nectin and JAMs are both
cis-homodimers
in immunoglobulin subfamily
stabilized by S-S bonds
trans-homo cell adhesion
JAMS determines
formation of cell polarity
What proteins involved in zonula adherins?
Afadin Nectin Cadherins --desmocolins --desmogleins Catenin complex Plaque --desmoplakin --plakoglobin --plakophilin
What are the types of cadherins in zonula adherins?
desmocolins
desmogleins
What are the types of plaques in zonula adherens?
desmoplakin
plakoglobin
plakophilin
What are the proteins involved in hemidesmosome?
BPAG 1 (plakin family) BPAG 2 Plectin (plakin family) Integrin subunit Beta4 integrin Plaque Plate Anchoring filament (laminin 5)
In hemidesmosome, what protein pairs are involved in connecting the basal lamina to intermed filaments?
BPAG1 and BPAG2
Plectin and Integrin subunit beta4 integrin
What autoimmune disorder caused by problem with hemidesmosomes? Symptoms?
Bullous pemphigoid (BPAG =bullous pemphigoid antigen) blisters b/w epidermis and dermis
How many monomers make connexon?
6 connexins
Hydrophilic or hydrophobic channel formed by connexons b/w cells?
hydrophilic
Primary cilia
nonmotile
each cell only has 1
9+0 arrangement
involved in signalling (control cell division and gene expression)
sense fluid flow in kidneys, liver, pancreas
hedgehog pathway
Hedgehog pathway
signalling in embryonic development
primary cilia involved in this
Disruption of primary cilium or basal body can lead to…
Ciliopathies such as: cystic kidneys obesity mental retardation blindness other developmental malformations
Characteristics of epithelial tissues
strong apical-basal polarity (involved in function)
avascular (blood supply is from connective tissue below)
attached to basal lamina in EM / basement membrane (basal+reticular laminae) in LM
attachments b/w cells maintained by specialized intercellular junctional complexes
high rate of turnover
high rate of mitosis after injury
prominent nerve supply and lymp vessels
Basal lamina vs
Reticular lamina
What type of collagen is in each?
basal: layer of extracellular matrix secreted by the epithelial cells, on which the epithelium sits
- -includes collagen type IV
- —produced by epithelial cells
reticular: thin layer below basal lamina that is mainly composed of collagen and serves to anchor the basal lamina to underlying connective tissue
- -includes collagen type III
- —produced by fibroblasts of adj connective tissue
Parenchyma
cells of a tissue/organ that are responsible for the specialized function of that tissue/organ
part of organ that carry “juice” around
made of epithelia
ex. GI tract, secretory acini and ducts
Stroma
internal support structure of gland/organ
contains blood vessels and nerves
Apical surface
in contact w/ outside world
ex. skin, GI tract
Blood supply to epithelial tissue in…
supporting tissues below basal lamina
Describe PAS staining of basal lamina/basement membrane
PAS stains hexos compounds in EC matrix
both basal lamina and basement membrane stain pos for PAS
Most cancers derived from what layer?
What makes the difference in the prognosis?
Epithelial cells (ex. basal cell carcinoma -- rapid division and migration is normal part of function) if metastasizing cells caught b/f cross basal lamina and reach blood vessels in underlying connective tissue, good prognosis
What germ layers are epithelial tissues derived from
all 3 germ layers
Functions of epithelial tissue
protection
absorption, filtration (selective absorption)
secretion/excretion
movement (myoepithelium associated with gland)
Myoepithelium
epithelial tissue involved in mvmt
in glands
contractile (actin and myosin)
General functions of…
squamous
cuboidal
columnar
squamous: absorption (less distance for diffusion), protection
cuboidal: active mvmt (space for cell machinery)
columnar: secretion and transport (space for cell machinery, apical modifications on surface inc SA)
What cell types usually have apical modifications?
columnar
Pseudostratified epithelium
all cells reach basal lamina
some reach surface
(usually only columnar cells)
Transitional epithelium
stratifed, but cells at lumenal surface take on diff shapes during diff functions (bladder – squamous when stretched)
Purpose of mucus
mucin and long chain carbs impede flow of water past cells (protect cells)
Stereocilia
nonmotile
long, branching
on pseudostratified columnar
reabsorb fluids from sperm development (epididymis
Describe shape changes in transitional epithelium
folded vesicles with plaques close to apical surface (pieces of fixed plasma membranes in vesicles)
folds like ping pong table up to plasma membrane
vesicles can resist chemicals in urine like urea
Merocrine
small part comes up to apical surface, then releases contents
exocytosis of both serous and mucous
no damage of cell, no change in homeostasis
Apocrine
bud of cell leaves, then lyses to secrete contents
cells lose cytoplasmic volume (must be replaced to remain viable)
ex. sweat glands of axilla and anogenital region
Holocrine
entire cell with secretory products leaves surface, then falls apart and releases contents
cells must undergo apoptosis, then degrade to release contents
ex. sebaceous glands in skin
Cytocrine
pass products from one cell to adj cell
melanocytes release melanin to keratinocytes directly
Exocrine vs endocrine gland
exo: retain duct and stalk
endo: lose duct and stalk – ductless, then angiogenesis; products move through basal lamina to blood vessel or moved through EC fluid
Unicellular exocrine gland
Unicellular endocrine gland
exo: goblet cells in resp epithelium
endo: DNES and APUD
DNES stands for
APUD stands for
DNES: diffuse neuroendocrine sys
APUD: amine precursor uptake and decarboxylation (endocrine signalling, GI tract – products regulate gut motility)
Organization types of secretory cells
Tubular (simple, simple branched, simple coiled, compound)
Acinar = berry (simple, simple branched, compound)
Compound tubuloacinar
How to identify serous vs mucous cells under microscope
Serous stain darker due to proteins (enzymes)
Mucini stain lighter due to glycoproteins
Mesoderm gives rise to…EPITHELIAL tissues
lining of urinary tract
parenchyma of gonads
lining of ducts of repro sys
lining of heart and all blood and lymp vessels
serous membranes of thoracic and abdominal cavities
cells of adrenal gland – cortex
Endoderm gives rise to…EPITHELIAL tissues
line gut
line resp tract
epithelial parenchyma of accessory digestive glands (liver, pancreas, spleen)
endocrine glands inferior to the head (except adrenal glands)
all exocrine glands
Ectoderm gives rise to…EPITHELIAL tissues
epidermis
Basement membrane
acellular
proteinaceous
support medium
secreted by epithelial cells
Endothelium vs enterocytes
Endothelium: thin layer of SIMPLE SQUAMOUS cells that lines the interior surface of blood vessels and lymphatic vessels
–each cell is called an endothelial cell
Enterocyte: SIMPLE COLUMNAR epithelial cells in the intestine
Lamina propia
loose connective tissue that is adjacent to epithelial tissues
highly vascularized
below basement membrane
Function of keratin
prevent water loss
prevent damage from external injury
What cell types can be keratinized/nonkeratinized?
Stratified squamous
Basement membrane vs basal lamina
Basement membrane: LM
Basal lamina: EM
Proteins and glycoproteins of basal lamina
What are these produced by?
laminins collagen type IV perlecan nidogen enactin produced by epithelial cells
Type of collagen in basal lamina vs reticular lamina?
Collagen produced by?
Basal: type IV produced by epithelial cells
Reticular: type III produced by fibroblasts of connective tissue
Describe basal lamina in urinary filtration barrier of kidney
Basal laminae of 2 cells can fuse
Describe epithelium of small intestine
plicae covered in villi which are covered in sheet of simple columnar epithelium
Brush border structure
composed of microvilli
microvilli and their glycocalyx create a striated appearance
terminal web anchor microvilli (actin filaments that project from lateral membrane of epithelial cells at apical domain)
Terminal bar
made of zonula occludens and zonula adherens
near apical surface
3 cell types of respiratory epithelium that can be seen with LM
Describe each
columnar cells (pseudostratified, covered in cilia) basal cells (stem cells taht repopulate damaged/aging epithelia) goblet cells (unicellular exocrine glands that secrete mucus)
How to distinguish cilia from microvilli in photomicrograph
cilia have darker staining basal bodies
How to distinguish diff cell junctions in EM
Zonula occludens: membranes of adj cells converge and fuse, obliterating the intercellular space
Zonula adherens: separated by small intercellular space
Gap junctions: membranes held closer together than desmosomes
Gap junctions found in what kinds of tissue?
cardiac muscle
smooth muscle
epithelial cells (cell-cell communication)
Epithelial cells comprise all types of multicellular glands (endocrine and exocrine) except for the…
adrenal glands
post pituitary gland
2 parts of exocrine gland
What does this have to do with classification?
secretory unit (epithelial cells that synthesize and release the product) excretory duct (lined by one or more layers of epithelial cells) First term describes arrangement of excretory duct; second describes arrangement of secretory units (ex. simple tubular, compound tubular)
Epithelial Transition Zones
define and list locations
area where there is a dramatic transition b/w epithelial tissue types (occur within one-cell width)
- -usually from stratified epithelium to simple columnar epithelium
1. distal esophagus –> cardia region of stomach
2. pyloric region of stomach –> duodenum
3. ileum –> cecum (small intestine –> large intestine)
4. rectum –> anal canal
5. midpoint of the larynx
6. endocervix –> ectocervix
7. bulbar conjunctiva –> cornea of eye
What makes ETZ’s clincally relevant?
due to differing mitotic rates of 2 tissue types, dysregulation of mitosis is common –> cancer hotspots
- -cells have diff receptors and have diff cell signalling cues
- -cells in chronic state of inflammation (inc mitotic rate, inc loss of control of cell cycle)
Describe differences in mitosis in stratified epithelium vs. simple columnar epithelium
Stratified
- -slower mitosis
- -stem cells in lower layers
- -vertical axis for mitosis (daughter cells pushed to lumen)
Simple
- -faster mitosis
- -stem cells distributed throughout
- -horiz axis for mitosis (daughter cells produced adj to original cell)
Functions of integument and parts they are associated with
- barrier
- -mechanical traumas, abrasions (cornified tissues of epidermis, CT of dermis, hypodermis)
- -heat loss (adipose of hypodermis)
- -UV (melanin in epidermis)
- -toxic aqueous compounds, water loss (epidermal lipids)
- -intrinsic and adaptive immune function (epidermis) - transmitter
- -sensory nerve endings in epidermis and dermis
- -eccrine sweat glands (evaporative cooling)
- -basal keratinocytes (absorb UV for vit D3 synthesis)
- -apocrine sweat glands, sebaceous glands, hair, nails, epidermis, hypodermis, olfactory and visual signals, sexual signals
What kind of secretion in eccrine sweat glands?
Describe eccrine gland structure, secretion, and location.
merocrine
simple, coiled structure
watery secretion (poor in proteins, contains NaCl, urea, and ammonia) – evaporative cooling
secretory portion located b/w reticular dermis and hypodermis
3 layers of integument and their features
Epidermis --keratinized stratified squamous epithelium --from ectoderm --avascular Dermis --DENSE connective tissue --from mesoderm or ectomesenchyme --vascular Hypodermis --LOOSE connective tissue --from mesoderm or ectomesenchyme --vascular