Membrane Physiology Ion Channels and Transport Flashcards
What stabilizes the tm proteins in the lipid bilayer
Transport of molecules across the cell membrane
•Membranes form hydrophobic barriers around cells and restrict the entry and exit of molecules
- This barrier function is crucially important because it allows the cell to____ ____of solutes in its cytosol that are different from those in the ___ ___ and in each of the ____ ____-enclosed compartments
- However, because of the barrier property of the membrane, cells require transport systems to permit entry and exit of
- ____ ___ ____that they need (___)
- concentrate compounds inside the cell (__)
- expel compounds out of the cell (__)
•A large number of genes encode for transport proteins, which make up between ______% of the membrane proteins. Some specialized mammalian cells devote up to ____ of their total metabolic energy consumption to membrane transport processes.•
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•Membranes form hydrophobic barriers around cells and restrict the entry and exit of molecules
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•This barrier function is crucially important because it allows the cell to maintain concentrations of solutes in its cytosol that are different from those in the extracellular fluid and in each of the intracellular membrane-enclosed compartments
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•However, because of the barrier property of the membrane, cells require transport systems to permit entry and exit of
- small polar compounds that they need (glucose)
- concentrate compounds inside the cell (K+)
- expel compounds out of the cell (Ca2+ and Na+)
•A large number of genes encode for transport proteins, which make up between 15 and 30% of the membrane proteins. Some specialized mammalian cells devote up to two-thirds of their total metabolic energy consumption to membrane transport processes.•
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Let’s consider transport across protein-free lipid bilayer
Permeability coefficients for the passage of various molecules through synthetic lipid bilayers. Unit is cm/sec.
•Given enough ___, virtually any molecule will diffuse across a___ ___lipid bilayer___ its concentration gradient – BUT the ___ at which it does so will vary enormously depending on, (1) ___of molecule, and (2) ____ ____ of molecule in oil
•Small non-polar molecules (___, ___) readily ___ in lipid bilayer and ___ ___across them
•Small uncharged polar molecules (___,___), also diffuse across lipid bilayer but at a ___ rate
•Larger uncharged polar molecules (___,___) are very ___ lipid soluble and therefore diffuse very ____
•No matter how small, lipid bilayers are ___e to ____molecules (ions). Charge and high degree of ___ of such molecules prevent them from entering the lipid bilayer
•Therefore, special membrane transport proteins are required for transferring __ ___and ___solutes across the cell membrane!
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Permeability coefficients for the passage of various molecules through synthetic lipid bilayers. Unit is cm/sec.
•Given enough time, virtually any molecule will diffuse across a protein-free lipid bilayer down its concentration gradient – BUT the rate at which it does so will vary enormously depending on, (1) size of molecule, and (2) relative solubility of molecule in oil
- Small non-polar molecules (O2, CO2) readily dissolve in lipid bilayer and diffuse rapidly across them
- Small uncharged polar molecules (water, urea), also diffuse across lipid bilayer but at a slower rate
- Larger uncharged polar molecules (glucose, sucrose) are very sparingly lipid soluble and therefore diffuse very slowly
•No matter how small, lipid bilayers are impermeable to charged molecules (ions). Charge and high degree of hydration of such molecules prevent them from entering the lipid bilayerà because of the charge
•Therefore, special membrane transport proteins are required for transferring large uncharged and charged solutes across the cell membrane!
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Transport of molecules across the plasma membrane
•The transport systems for ___ ____ molecules and ___ ions fall into 3 categories
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Note - Fourth mechanism of transport used for the transport of ___ ___ molecules is ___
•Simple diffusion is the ___ flow of a solute from a ___ to a ___ concentration (downhill) due to ___ ____ ____.
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•Facilitated diffusion is ___ transport of a solute from ___ to a ___ concentration (downhill) mediated by a specific __ ___.
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•Active transport is transport of a solute across a membrane ___ a concentration gradient (uphill), and thus requires ___ (frequently derived from the ___ of ___); a specific _____(pump) is involved. Active transport can be further subdivided into ____and___ active transport.
•The transport systems for small organic molecules and inorganic ions fall into 3 categories
- Simple diffusion
- Facilitated Diffusion
- Active transport
Note - Fourth mechanism of transport used for the transport of large individual molecules is endocytosis
•Simple diffusion is the passive flow of a solute from a higher to a lower concentration (downhill) due to random thermal movement.
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•Facilitated diffusion is passive transport of a solute from a higher to a lower concentration (downhill) mediated by a specific protein transporter.
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•Active transport is transport of a solute across a membrane against a concentration gradient (uphill), and thus requires energy (frequently derived from the hydrolysis of ATP); a specific transporter (pump) is involved. Active transport can be further subdivided into primary and secondary active transport.
Concentration (chemical) gradient vs Electrochemical gradient
- In the case of uncharged molecules, movement of the molecule is influenced by its ____ gradient.
- In the case of charged molecules, movement across a membrane is influenced by the molecule’s ___gradient, and by the fact that the interior of the plasma membrane is ___charged relative to the extracellular side of the membrane. This negative membrane potential exerts a force on any molecule carrying an electrical charge, which determines an electrical gradient (or ___ ___ ___) for that molecule. The effects of the electrical and concentration gradients of a molecule are combined in what is called the ____ gradient transport.
- In the case of uncharged molecules, movement of the molecule is influenced by its concentration gradient.
- In the case of charged molecules, movement across a membrane is influenced by the molecule’s concentration gradient, and by the fact that the interior of the plasma membrane is negatively charged relative to the extracellular side of the membrane. This negative membrane potential exerts a force on any molecule carrying an electrical charge, which determines an electrical gradient (or electrical energy difference) for that molecule. The effects of the electrical and concentration gradients of a molecule are combined in what is called the electrochemical gradient transport.
Simple Diffusion
____ (such as O2 and CO2), and ___ ___ substances (such as steroid hormones) cross membranes by simple diffusion.
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•In simple diffusion, small uncharged molecules move from region of high concentration to region of low concentration – can occur from extracellular side to intracellular side or ___ ____ depending on concentration gradient. Movement occurs until the ____ ____ is achieved on __ ___of the membrane.
•Gases (such as O2 and CO2), and lipid-soluble substances (such as steroid hormones) cross membranes by simple diffusion.
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•In simple diffusion, small uncharged molecules move from region of high concentration to region of low concentration – can occur from extracellular side to intracellular side or vice versa depending on concentration gradient. Movement occurs until the same concentration is achieved on both sides of the membrane.
Simple Diffusion
•The following factors affect net diffusion of a substance
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(1) Its ___ ____across the membrane: solutes move from high
to low concentration
(2) The____ ____ of the substance for the membrane – Its solubility in the lipid bilayer
(3) The ___ ____ gradient across the membrane: increased pressure will increase the ___ and ___of the collision between the ___ and the ___
(4) Temperature: increased temperature will increase particle ___ and thus increase the ____ of collisions between external particles and the membrane
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•Diffusion kinetics is ___ – not ___
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•No ___ required.
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•No ____ involved.
•The following factors affect net diffusion of a substance
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(1) Its concentration gradient across the membrane: solutes move from high
to low concentration
(2) The permeability coefficient of the substance for the membrane – Its
solubility in the lipid bilayer
(3) The hydrostatic pressure gradient across the membrane: increased
pressure will increase the rate and force of the collision between the
molecules and the membrane
(4) Temperature: increased temperature will increase particle motion and
thus increase the frequency of collisions between external particles and the
membrane
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•Diffusion kinetics is linear – not saturable.
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•No energy required.
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•No protein involved.
Facilitated Diffusion
•Facilitated diffusion requires carrier or channel protein to ____ move polar or charged molecules
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•Carrier or channel proteins are ____ ____proteins that enable specific hydrophillic solutes to cross the membrane without coming into direct contact with the hydrophobic interior of the lipid bilayer
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•The mechanism is ___ diffusion – ie., the molecule moves from a region of high concentration to one of low concentration and therefore can occur in either direction depending on concentration gradient.
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•Energy is ___ ____
•Facilitated diffusion requires carrier or channel protein to selectively move polar or charged molecules
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•Carrier or channel proteins are multipass transmembrane proteins that enable specific hydrophillic solutes to cross the membrane without coming into direct contact with the hydrophobic interior of the lipid bilayer
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•The mechanism is passive diffusion – ie., the molecule moves from a region of high concentration to one of low concentration and therefore can occur in either direction depending on concentration gradient.
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•Energy is not required
Carrier-mediated diffusion
•Carriers – also known as ___ or ____
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•Carrier-mediated diffusion requires ____ binding of molecules to be transported to the carrier
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•The molecule binds on one side of the membrane, following which the carrier protein undergoes ____ changes that allow the molecule to pass through the membrane and be released on the other side.
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•Although the transported molecules are bound to proteins, the transport process is still classified as diffusion because energy is not required, and the compound ____
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___ ___ and ____ are transported by carriers.
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•What would kinetics of transport by carrier proteins look like? Clue – carrier proteins, like enzymes, exhibit saturation kinetics.
•Carriers – also known as permeases or transporters
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•Carrier-mediated diffusion requires specific binding of molecules to be transported to the carrier
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•The molecule binds on one side of the membrane, following which the carrier protein undergoes conformational changes that allow the molecule to pass through the membrane and be released on the other side.
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•Although the transported molecules are bound to proteins, the transport process is still classified as diffusion because energy is not required, and the compound equilibrates.
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•Sugars, amino acids and nucelosides are transported by carriers.
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•What would kinetics of transport by carrier proteins look like? Clue – carrier proteins, like enzymes, exhibit saturation kinetics.
Kinetics of simple vs carrier-mediated diffusion
•The rate at which solutes enter a cell by carrier-mediated diffusion is determined not only by the ___ ___ of solute across the membrane but also by the ___ of carrier proteins available.
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•Therefore, carrier-mediated diffusion resembles ___ ____ interaction.
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•Points of resemblance to enzyme action are as follows:
(1) There is a ___ ___ ___ for the solute
(2) The carrier is ____e, so it has a maximum ___of
transport (Vmax)
(3) There is a___ ____
(Km) for the solute
(4) Structurally similar ___ ___ ____transport
•The rate at which solutes enter a cell by carrier-mediated diffusion is determined not only by the concentration gradient of solute across the membrane but also by the amount of carrier proteins available.
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•Therefore, carrier-mediated diffusion resembles substrate–enzyme interaction.
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•Points of resemblance to enzyme action are as follows:
(1) There is a specific binding
site for the solute
(2) The carrier is saturable, so it
has a maximum rate of
transport (Vmax)
(3) There is a binding constant
(Km) for the solute
(4) Structurally similar
competitive inhibitors block
transport
Example of carrier-mediated diffusion: Glucose transporter
•Glucose cannot cross membrane readily in absence of transporter
•Family of transport proteins (____-___) encoded by ____ genes with different____ ____ have been identified
_____changes in the transporter accompany glucose movement across the membrane
- In the first conformation shown (A), glucose binds to a site exposed on the ____ of the plasma membrane. The transporter then undergoes a ____change such that the glucose-binding site faces the ____of the cell and glucose is released into the ____(B). The transporter then returns to its ____ conformation (C).
- Competitive inhibition by glucose ____
- Stereospecific for___glucose
- Glucose cannot cross membrane readily in absence of transporter
- Family of transport proteins (GLUT1-GLUT7) encoded by different genes with different tissue distributions have been identified
- Conformational changes in the transporter accompany glucose movement across the membrane
- In the first conformation shown (A), glucose binds to a site exposed on the outside of the plasma membrane. The transporter then undergoes a conformational change such that the glucose-binding site faces the inside of the cell and glucose is released into the cytosol (B). The transporter then returns to its original conformation (C).
- Competitive inhibition by glucose analogsà bind to same sight
- Stereospecific for D-glucose
Channel-mediated diffusion
•Channels transport____( _ _ _ _).
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•Most channels are____ – the____ pore of an ion channel is not ___ ____
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•The channel switches between an ___ and ___ state by a change in conformation, regulated by a _____
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•The stimuli can be ____changes across the membrane (______ channels), the ____of a compound ____ gated channels), or a ____ change in the ____ domain (____-gated and ____ gated).
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•There is ___ ____ of molecule to be transported to the channel - channel proteins form open pores through the membrane, allowing the free diffusion of any molecule of the appropriate ___and ____– therefore, facilitated diffusion by channels is much ____ than by carriers.
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•Channels are____ too - selectivity is determined by the____ of the central ___ and the distribution of ___ ___ ___ along the outside of a channel’s opening.
•Channels transport ions (Na+, K+, Ca2+, Cl-).
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•Most channels are gated – the central pore of an ion channel is not continuously open.
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•The channel switches between an open and closed state by a change in conformation, regulated by a stimulus.
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•The stimuli can be voltage changes across the membrane (voltage-gated channels), the binding of a compound (ligand-gated channels), or a regulatory change in the intracellular domain (phosphorylation-gated and pressure-gated).
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•There is no binding of molecule to be transported to the channel - channel proteins form open pores through the membrane, allowing the free diffusion of any molecule of the appropriate size and charge – therefore, facilitated diffusion by channels is much faster than by carriers.
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•Channels are selective too - selectivity is determined by the size of the central pore and the distribution of charged amino acids along the outside of a channel’s opening.
Example of channel-mediated diffusion: Nicotinic Acetylcholine Receptor
•Binding of ___molecules induces a ___ ___ that leads to ___ of the transmembrane channel allowing diffusion of ____ ions through the conducting pore
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___ of positive ions into the cells leads to ____, which could result in the generation of action potential (we will learn about this in the next lecture)
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•Continued presence of ____ results in a ____ conformational change where the channel ___ and the protein enters a _____ state
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•Binding of ACh molecules induces a conformational change that leads to opening of the transmembrane channel allowing diffusion of Na+ ions through the conducting pore
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•Influx of positive ions into the cells leads to depolarization, which could result in the generation of action potential (we will learn about this in the next lecture)
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•Continued presence of agonist results in a second conformational change where the channel closes and the protein enters a desensitized state
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Active Transport
•Transport of a molecule ____ its gradient is energetically unfavorable, and therefore requires that the transporter harness an energy source.
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•If energy is applied directly to the transporter (through hydrolysis of ATP), the transport is called _____ active transport; if the energy is used to establish an ___ ____ and the gradient is used to___ another compound, the transport is called ____ active transport.
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•Depending on the transport direction of the solute, secondary active transporters are classified as either symporters or antiporters. Symporters, transport the two molecules in the___ direction, whereas antiporters move their substrates in ___ directions.
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•There are 3 types of ___ _____ (also carriers)
(1)
(2)
(3)
•Transport of a molecule against its gradient is energetically unfavorable, and therefore requires that the transporter harness an energy source.
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•If energy is applied directly to the transporter (through hydrolysis of ATP), the transport is called primary active transport; if the energy is used to establish an ion gradient and the gradient is used to concentrate another compound, the transport is called secondary active transport.
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•Depending on the transport direction of the solute, secondary active transporters are classified as either symporters or antiporters. Symporters, transport the two molecules in the same direction, whereas antiporters move their substrates in opposite directions.
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•There are 3 types of active transporters (also carriers)
(1) ATP-driven ion pumps (primary) Ex) Na/K pump
(2) Coupled transporters (secondary) Ex) Na/Glucose Transporter
(3) ABC transporters (primary)
Comparison between carrier-mediated facilitative diffusion and active transport
Same: saturation kinetics, specificity, can be inhibited
FD: move down conc grad, no E
AT: moves against conc grad, yes E