Eukaryotic DNA Replication Flashcards

1
Q

eukaryotic replication

A
  • telomere-replication mechanism
  • S-phase
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2
Q

E. coli replication

A

4.6x10^6 bps in 40mins

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3
Q

D. melanogaster replication

A

122x10^6bps in 4 mins

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4
Q

Initiation

A
  1. ORC1-6 binds ori
  2. cdc6 binds ORC1-6
  3. loads 2x cdt1-Mcm2-7
  4. cdk phosphorylates Sld2/3
  5. GINS and pol-epsilon associate with Mcm2-7s
  6. ddk phosphorylates Mcms2-7
  7. activated: ssDNA, replication
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5
Q

Mcm2-7

A

head-to-head double hexameters transiently opened to grasp dna

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6
Q

when does licensing occur?

A

Late M/G1

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7
Q

replicative polymerases

A

5’ -> 3’

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8
Q

pol-alpha

A

2 subunits: rna fragment and pol1

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9
Q

rna primers

A

facilitated by Ctf4 coupling pol-alpha with leading strand

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10
Q

pol delta and epsilon

A

enhanced by PCNA

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11
Q

PCNA

A
  • proliferating cell nuclear antigen
  • ring-like
  • holds polymerases to template
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12
Q

S. pombe ORC

A

ORC4 domain

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13
Q

Mammal ORC

A
  • epigenetic marks
  • G4 structures
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14
Q

origins

A

minimise transcription conflict

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15
Q

geminin/SCF

A

triple-Ub tag on cdt1 on replication fork formation

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16
Q

Mcm2-7

A

expelled from nucleus: spatial control

17
Q

visualisation

A

biotin + dUTP

18
Q

timing programme

A
  • economy mechanism: homeostasis
  • genomic stability (tumour and neoplasm due to fork stalling)
  • H2A.Z controls transcription
  • aphidicolin; apoptotic, dna repair
19
Q
A