Chemistry of Life Flashcards

1
Q

pH of life

A

7.2 - 7.4

blood has to be slightly basic to accomodate for carbonic acid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What elements is life mostly composed of?

A

Carbon, oxygen, hydrogen, and nitrogen

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

4 macromolecules and function

A

Lipids: membranes, hormones, communication

Nucleic acids: store genetic information (can act as catalysts)

Proteins: structure, function, catalyst

Carbohydrates: store energy, indentification

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Valence shell

A

Outermost shell of electrons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What is the bonding point?

A

Unpaired valence electrons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

4 main types of bonds

A
  1. Covalent
  2. Polar covalent
  3. Hydrogen
  4. Ionic
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Covalent bonds

A

Shared electrons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

A single covalent bond has…

A

2 electrons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Nonpolar covalent bonds

A

electrons are shared equally

electrons are halfway between the two atoms

atoms have no charge

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Polar covalent bonds

A

Electrons are not shared equally due to electronegatively

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Why is water a polar molecule?

A

Oxygen has high electronegativity that attracts electrons. This gives it a partial negative charge and hydrogen gets a partial positive charge

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What is CH4?

A

Methane

nonpolar covalent

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What is NH3?

A

Ammonia

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Electronegativity

A

chemical property that describes the tendency of an atom to attract electrons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What factors affect electronegativity?

A

Atomic number (# of protons)

Greater positive charge will attract more electrons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Label the 3 atoms of life in terms of increasing electronegativity

A

H, C, O

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

Strength of bonds

A

Nonpolar covalent are hardest to break (methane, hydrogen)

Polar covalent (water, ammonia)

Ionic bonds (NaCl) are easiest to break

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

Ionic bonds

A

have full charge

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

-OH functional group

A

hydroxyl, probably some type of alcohol

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

What does a functional group with oxygen probably indicate?

A

The molecule is probably polar

This means that it is hydrophilic

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

Hydrophilic substances

A

can interact with water through their charges

if it has a partial or full charge

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Hydrophobic substances

A

cannot interact with water through these partial charges

Ex: hydrocarbons have no charge

23
Q

What drives protein folding?

A

Interactions between hydrophilic and hydrophobic molecules

24
Q

Where are there hydrogen bonds in the hydrogen atom?

A

Between two different water molecules

polar covalent is actually in the molecule

25
Hydrogen bond
an attractive interaction between polar molecules Hydrogen bonds to atoms with a high electronegativity
26
What does hydrogen bonding lead to?
Cohesion High specific heat
27
Cohesion
water can stick to itself surface tension
28
Why is water's high specific heat important?
It makes a good buffer in temperature which is important for life
29
Adhesion
water can stick to other things capillary action
30
Why does water expand when it freezes?
the orientation of hydrogen bonds water molecules are spaced further apart in ice lattice structure (less dense)
31
Why is water a great solvent?
The partial negative and partial positive charges can break apart substances Ex: Na+Cl- Na is attracted to negative oxygen Cl is attracted to positive hydrogen
32
How does water act as a pH buffer?
It can dissociate itself into H+ and OH-
33
H+
hydronium
34
OH-
hydroxide
35
What is the basis of the pH scale?
Proton (hydrogen ion) concentration more hydrogen ions = lower pH
36
Acids
molecules that donate H+ makes sense that more hydrogen ions = lower pH, because acids are the ones that donate H+ Ex: HCl
37
Bases
molecules that remove H+ raise pH Ex: NaOH
38
Is water an acid or a base?
It can act as both because it can pick up and remove hydrogen ions
39
Veins
carry oxygen depleted blood to the heart
40
Arteries
carry oxygen rich blood away from the heart
41
Where is CO2 high in the body?
Veins and tissues This reduces the affinity of hemoglobin for oxygen. Hemoglobin will release more oxygen to tissues
42
How is CO2 transported in the body?
Dissolved in blood as carbonic acid that water has to buffer
43
What happens when affinity of hemoglobin is lowered?
Hemoglobin is more likely to release oxygen, since it cannot carry as much
44
Where is CO2 low in the body?
Arteries and lungs Hemoglobin has a high affinity for oxygen. It does not need to release oxygen in these places. It needs to carry it.
45
What happens when CO2 levels in the blood increase?
more H+ is produced from forming carbonic acid lowers pH hemoglobin has a lower affinity for oxygen when pH lowers because it indicates high CO2
46
When does hemoglobin's affinity for oxygen increase?
When pH is high This indicates less H+ ions and correspondingly less CO2
47
Carbonic acid
an unstable intermediate molecule that will quickly dissociate into HCO-3 and H+
48
If an atom has 4 electrons in its valence shell what kinds of covalent bonds can it form?
single, double, or triple
49
When atoms in a covalent bond have the same electronegativity what type of bond form?
Nonpolar covalent Molecule is not charged
50
How many other water molecules is one water molecule bonded to?
4
51
Hydronium ion
a water molecule with an extra H+ forms from water gaining a H+ from another water molecule has a +1 charge
52
Why do all living things need pH buffers?
Amino acid side chains have many carboxyl and amino acid groups
53
A solution with a pH 5 has how many more hydrogen ions in it than a solution with pH 7?
100x
54
What happens to HCl in water?
It is a strong acid, so it dissociates completely and produces lots of H+ which lowers the pH