Chapter 14: Gene Regulation In Eukaryotes Flashcards

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1
Q

genes that code for proteins have promoters that contain

A

transcriptional start site
TATA Box
regulatory elements

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2
Q

transcriptional start site

A

+1
place where RNA synthesis begins

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3
Q

TATA Box

position
binding

A

sequence in the promoter -25 bases from start site
position of TATA box determines where RNA synthesis starts
general transcription factors and RNA polymerase bind

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4
Q

core promoter

A

TATA Box and start site

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5
Q

genes that have only a core promoter have

A

Low (basal) level of transcription
(Core promoter has bare minimum for what is needed to make RNA)

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6
Q

regulatory elements

A

DNA sequences that regulate the expression of genes
usually located -50 to -100 bases from start site

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7
Q

if ____ bind to the regulatory elements of a gene transcription levels of the gene are greatly ____

A

transcription factors (activators)
increased

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8
Q

in eukaryotes, transcription factors are

A

activators

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9
Q

eukaryotes don’t have

A

operons

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10
Q

all genes expressed at the same time have

A

same regulatory element sequences in promoter
transcription factors (activators) bind to the regulatory elements
the genes are transcribed

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11
Q

coordinate gene expression

A

genes that have the same regulatory element in their promoter will be expressed at the same time

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12
Q

SRE

A

DNA sequence and binding site for TF

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13
Q

how are genes that code for proteins in the same pathway coordinately regulated?

A

Coordinate expression of nonadjacent genes

genes on different t parts of a chromosome have the same DNA response element in their promoter

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14
Q

genes activated by the same stimulus have same ___ in their ___

A

DNA response element
promoters

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15
Q

one gene may be regulated by

A

many different response elements

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16
Q

metallothionein
turned

A

stress response gene
turned on by heavy metals, steroids, other stress

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17
Q

eukaryotic genes have many

A

enhancers

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18
Q

enhancers

A

DNA sequences located far away from the start site of a gene, that regulate transcription from the gene
-1000s

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19
Q

only found in eukaryotes
only found in prokaryotes

A

enhancers
operons

20
Q

number of bases
core promoter
regulatory elements
enhancers

A

+1 to -30
-50 to -100
-1000s

21
Q

activator proteins

A

bind to sequences (regulatory elements) in the enhancer
transcription factor

22
Q

mediator proteins

A

bind to the activator proteins and form a large complex

23
Q

The DNA bends so now

A

the enhancer is located near the promoter of the gene

24
Q

general transcription factors bind to
which leads to

A

the activators and the promoter
rna polymerase binding-> high level of RNA made

25
Q

tissue specific gene regulation

A

every cell has the same DNA
different tissues make different rna and proteins

26
Q

liver cell produces

A

album protein found in blood

27
Q

lens cell of eye produces

A

crystallin protein

28
Q

genes expressed in a specific tissue have a unique set of

A

regulatory elements in their enhancers

29
Q

specific activator proteins bind

A

to each regulatory elements (dna sequences)

30
Q

different activator proteins are expressed in

A

different cell types

31
Q

The specific transcription factors/ activators made in each cell type determines

A

which genes are expressdd

32
Q

regulation of chromatin structure

A

DNA needs to be in the less condensed, unwound form (beads on a string, 10nm) to be transcribed into RNA
tightly packed means proteins can’t get through and bind.

33
Q

chromatin has ___ forms
they are

A

2
euchromatin and heterochromatin

34
Q

euchromatin

A

less condensed form of DNA
beads on a string, 10 nm
genes can be expressed

35
Q

heterocromatin

A

more condensed form of DNA
30 nm or more compact
genes are usually off

36
Q

genes must be in the ___ condensed form of chromatin to be expressed

A

less

37
Q

activator proteins bind to both

A

the enhancers and regulatory elements

38
Q

the genes in euchromatin are turned
heterochromatin

A

on
off

39
Q

three ways to change chromatin structure

A

acetylation of histones
chromatin remodeling
methylation of DNA in promoter

40
Q

histone code

A

additional if certain groups to histones in nucleosomes controls whether DNA is tightly wound up or in less condensed form

41
Q

chromatin remodeling

A

some of the nucleosomes are removed and DNA is partially unwound

42
Q

what changes are in euchromatin, turns genes on

A

acetylation of histones
chromatin remodeling

43
Q

what changes are in heterochromatin and turn genes off

A

methylation of DNA in promoter

44
Q

methylation of DNA in promoter

A

prevents transcription factors from binding to DNA and causes DNA to tightly wind up

45
Q

easiest way to turn DNA off is

A

methylation of DNA in promoter

46
Q

active
silent

A

euchromatin
heterochromatin