Chapter 12 Flashcards

1
Q

What is reaction velocity (v)?

A

Rate of change from reactants to products with respect to time

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2
Q

What is the rate constant (k)?

A

Describes how a reaction is dependent on the concentration of reactant/substrate

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3
Q

What is the equation for reaction velocity (v)?

A

v = k[A]

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4
Q

What do the enzyme and substrate react to form?

A

Michaelis (ES) Complex

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5
Q

What are the three assumptions of enzyme kinetics?

A

Initial Velocity Assumption
Equilibrium Assumption
Steady State Assumption

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6
Q

What does the initial velocity assumption say?

A

Before a build-up of P then the reverse reaction is negligible (ignore P + E -> ES)

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7
Q

What does the equilibrium assumption say?

A

The first step of the reaction reaches equilibrium before the production of products

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8
Q

What is the equation for the dissociation constant (Ks)?

A

Ks = [E][S] / [ES]

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9
Q

What does the steady state assumption say?

A

The rate of ES formation equals the rate of ES consumption ([ES] = constant)

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10
Q

What is the Michaelis-Menten equation?

A

Vo = Vmax[S] / Km + [S]

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11
Q

What is Vmax?

A

The theoretical maximum rate; would require that all enzyme molecules be bound to the substrate

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12
Q

What is Km?

A

Substrate concentration that reaches half maximum velocity

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13
Q

What does a small Km mean?

A

The substrate has a high affinity for the enzyme

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14
Q

What does a large Km mean?

A

The substrate has a low affinity for the enzyme

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15
Q

What is the equation for Km?

A

k-1 + k2 / k1

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16
Q

What is Kcat?

A

Turnover number; number of substrate molecules converted to product per enzyme molecule per unit of time

17
Q

What is the equation for Kcat?

A

Vmax / [E]t

18
Q

What is the formula for catalytic efficiency?

A

Vo = (Kcat/Km) [E][S]

19
Q

What is maximum catalytic efficiency?

A

10^9 m^-1 s^-1

20
Q

What limits catalytic efficiency?

A

Diffusion limit

21
Q

What is the diffusion limit?

A

How quickly the ES complex will get together

22
Q

What is the purpose of a lineweaver-burk plot?

A

Plot Michaelis-Menten on a linear plot

23
Q

What are the three types of enzyme inhibition?

A

Competitive
Uncompetitive
Non-competitive

24
Q

What is competitive inhibition?

A

Inhibitor competes with substrate for binding site

25
Q

What does the Lineweaver-Burk graph look like for competitive inhibition?

A

Same y-intercept, different slopes

26
Q

What is uncompetitive inhibition?

A

Inhibitor binds to ES complex

27
Q

What does the Lineweaver-Burk graph look like for uncompetitive inhibition?

A

Same slopes, different y-intercepts

28
Q

What is noncompetitive inhibition?

A

Combination of competitive and uncompetitive inhibition; inhibitor binds at an exosite whether or not substrate is bound

29
Q

For mixed inhibition what does it mean is Ki = Ki`?

A

Equal affinity

30
Q

For mixed inhibition what does it mean is Ki < Ki`?

A

More affinity for the enzyme

31
Q

For mixed inhibition what does it mean is Ki > Ki`?

A

More affinity for ES complex

32
Q

What is an ordered single-displacement reaction?

A

Bimolecular reaction in which the leading substrate must bind first followed by an ordered release of product

33
Q

What is a random single-displacement reaction?

A

Bimolecular reaction in which either substrate may bind first

34
Q

What is a double displacement reaction?

A

Ping-pong reaction
Bimolecular reaction in which the product of the first reaction is released prior to reaction with second substrate