carbohydrate metabolism glycolysis and the TCA Flashcards

1
Q

what is an anabolic pathway

A

pathway concerned with the synthesis of cellular components

makes bonds

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2
Q

what is a catabolic pathway

A

pathway that is involved with the degradation of cellular components
exergonic process which breaks bonds
increases entropy

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3
Q

what is oxidation

A

loss of electrons
gain of oxygen
loss of hydrogen

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4
Q

what is reduction

A

gain of electrons
loss of oxygen
gain of hydrogen

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5
Q

where are the acid anhydride bonds located in ATP

A

they are located between the phosphate-oxygen-phosphate in the triphosphate molecule of ATP

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6
Q

where are the phosphate ester bonds located in the ATP molecule

A

between the ribose oxygen and the phosphate of the triphosphate group

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7
Q

why is ATP the currency of energy

A

due to its unstable energy rich nature of the acid anhydride bond

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8
Q

why are the acid anhydride bonds full of energy

A

due to the charge repulsion because of the adjacent phosphate groups
and because of the resonance of phosphate ions

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9
Q

which molecules have energy

A

sugar
starch
protein

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10
Q

what is oxidation according to biochemical definitions

A

we can remove an electron and protons(H+ ions)

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11
Q

what is TCA

A

tricarboxylic acid cycle/krebs cycle/citric acid cycle

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12
Q

what is the most common fuel in mammals

A

glucose

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13
Q

what is the only fuel the brain uses

A

glucose

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14
Q

describe the structure of glucose

A

it is a 6 carbon sugar that has a tendency to remain in ring formation

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15
Q

what occurs in glycolysis

A

glucose broken into 2 molecules of pyruvate

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16
Q

what products are produced when glucose is fermented

A

ethanol
C02
lactate

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17
Q

what products are produced when we have complete oxidation of glucose

A

6h20 and 2c02

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18
Q

what are microbes called when they can survive in no oxygen

A

facultative anaerobes

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19
Q

what do animals display

A

anerobiosis

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20
Q

what is anaerobiosis

A

tolerate small amounts of anaerobic activity

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21
Q

where does glycolysis occur

A

in the cytosol

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22
Q

what are the two phases of glycolysis

A

the investment phase and the return phase

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23
Q

what occurs in the investment phase of glycolysis

A

we use 2 molecules of ATP to produce fructose 1,6 bisphosphate

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24
Q

what occurs in the return phase of glycolysis

A

we get some ATP BACK and pyruvate is produced

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25
how does glucose enter the cell
via transport proteins GLUT4
26
what is the first stage of glycolysis
glucose enters the cell | glucose reacts with ATP- phosphorylated withe the enzyme hexokinase to produce glucose-6 phosphate
27
why can glucose 6 phosphate not get out of the cell
because it is charged
28
why can glucose 6 phosphate be broken down easily
due to the instability of the molecule due to the negative charge
29
what conditions does hexokinase require
magnesium- type 2 and crowns disease can lack this
30
which enzyme catalyses the isomerisation of G6P
phosphoglucose isomerase
31
what is isomerism
the same empirical formula but a change in the shape
32
what are the stages of isomerism of g6p
1. first the carbon 6 ring is opened- has an aldove 2. catalyse isomerisation occurs and the aldose is converted to a ketose 3. formation of the cyclic fructose 6 phosphate
33
what then happens to fructose 6 phosphate
1. it reacts with ATP and phosphofructokinase(PFK) to produce fructose1,6 bisphosphate, ADP, H+ 2. this reacts with aldolase to produce glyceraldehyde 3 phosphate (gap) and dihydroxyacetone phosphate(DHAP)
34
what is the rate determining step for glycolysis
the phosphorylation of fructose 6 phosphate to fructose 1,6 phosphate by phosphofructokinase
35
what are the two products aldolase produces
GAP AND DHAP
36
how do we convert dihydroxyacetone phosphate into glyceraldehyde 3 phosphate
by the enzyme triose phosphate isomerase which forms aldose and then forms glyceraldehyde 3 phosphate
37
what is the ATP consuming summary
1. hexokinase 2. phosphoglucose isomerase 3. phosphofructosekinase 4. aldose 5. triose phosphate isomerase
38
what does the second stage of glycolysis start with
glyceraldehyde 3 phosphate +NAD + pi and the enzyme glyceraldehyde 3 phosphate dehydrogenase to form 1,3bisphosphogltcerate + NADH+H+
39
what molecule has a high phosphorylation transfer potential
1,3bisphosphogltcerate
40
what happens to the 1,3 bisphosphogltcerate
reacts with ADP+H+ and phosphoglycerate kinase to from 3 phosphoglycerate and ATP
41
what then happens to 3 phosphoglycerate
it reacts with phosphoglycerate mutate to form 2 phosphoglycerate
42
what does 2 phosphoglycerate react with
endolase and a hydrolysis reaction to form ATP and pyruvate
43
what can the reversible reaction of pyruvate form
phophophenolpyruvate (PEP) +ADP+H+
44
which molecule must be regernated from the metabolism of pyruvate
NAD
45
at the end of glycolysis what do we have
used 2 ATP molecules | created 4 ATP molecules THEREFORE net gain of 2ATP, 2PYRUVATE
46
how can NAD be regenerated
1. pyruvate to lactate 2. pyruvate to acetylCoA 3. pyruvate to acetaldehyde-> ethanol which oxidises NADH
47
how does pyruvate become acetyl coenzyme A
by the enzyme pyruvate dehydrogenase | and through oxidative decarboxylation
48
where is acetylcoenzyme A found
in the matrix of the mitochondria
49
what is the main role of the krebs cycle
to harvest high energy electrons from carbon compounds
50
what is the first stage of the krebs cycle
citrate synthase
51
how is citrate synthesised in the cycle
acetylcoA(2C) enters and is condensed and reacts with oxaloacetate(4C) to form citrate COA and then the coA leaves the molecule to form citrate(6C)
52
what is the second stage of the krebs cycle
citrate first undergoes dehydration, then isomerisation to form cis citrate and then hydration again to form isocitrate. aconitase reacts in both steps
53
what is the third stage of the krebs cycle
isocitrate(6C) undergoes oxidative decarboxylation which forms alpha ketoglutarate(5C) with the help of the enzyme isocitrate dehydrogenase ALSO RELEASES NADH
54
what is the rate determining step of the krebs cycle
the overall formation of a ketoglucarate
55
WHAT IS STAGE 4 OF THE KREBS CYCLE
oxidative decarboxylation from a ketoglutarate(5C) to succinylCOA(4C) RELEASES NADH
56
what is step 5 of the krebs cycle
substrate level phosphorylation from Succinyl COA to succinate this forms ATP with the help of the enzyme succinylCOA synthase
57
what is step 6 of the krebs cycle
dehydrogenation/oxidation from succinate(4C) to fumarate (4C) releasing FADH2
58
what is step 7 of the krebs cycle
hydration of fumarate to malate by fumerase
59
what is step 8 of the krebs cycle
dehydrogenation/oxidation from malate to oxaloacetate with malate dehydrogenase RELEASING NADPH
60
which step of the krebs cycle is irreversible
1,3,4