28 Flashcards

1
Q

What is glucose used as?

A

A fuel in all organisms (animals, fungi, plants, bacteria)

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2
Q

What is glucose oxidised in?

A

Glycolysis

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3
Q

Where does glycolysis happen

A

usually cytoplasmic in eukaryotes (other pathways mitochondrial)

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4
Q

Some cells in animals rlly on/ preferentially use…

A

Glucose

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5
Q

Glucose is essential as fuel for______ why?

A

red blood cells
Red blood cells do not have mitochondria, so do not have the other pathways

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6
Q

What is the preferred fuel in the brain but expand on ‘preferred’

A
  • High energy requirement: human brain requires around 120 g of glucose per day
  • Brain cells have mitochondria - can do other pathways
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7
Q

Why is glucose a preferred molecule?

A

ORIGNALLY: - Glucose easily crosses the blood-brain barrier, but fats do not (fats being the alternative source)

NOW: - A high level of fatty acid metabolism is dangerous - Relying on mitochondrial reactions and higher levels of oxygen risks anoxia (low oxygen) and higher production of damaging reactive oxygen species

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8
Q

Glucose is the favoured molecule in the _ _ _ WHY?

A

Eye
- blood vessels (bringing oxygen) and mitochodria would refract light in the optical path (lens, cornea) to retina

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9
Q

White muscles tend to use ______ red muscles tend to use_____

A
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10
Q

What is glycolysis

A

Splitting of glucose

  • Conversion of one molecule of glucose (6 carbon) to two molecules of pyruvate (3 carbon)
  • Pyruvate may be further metabolized aerobically or anaerobically
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11
Q

Where is energy conserved in glycolysis

A

Energy conserved in ATP and NADH

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12
Q

Two phases of glycolysis and the net

A
  • Activation of glucose Getting the molecule into a form so energy can be captured Requires an energy input
  • Return on the investment Making an ATP profit

(After glycolysis there is still carbon in pyruvate that can be extracted for energy)

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13
Q

What does the ‘energy investment’ phase entail? What does the ‘energy payoff’ phase entail?

A
  • Splitting (6C to 3C) the
    molecule occurs at the end of the investment phase
  • After a conversion, both 3C molecules are processed the same way

(On both sides ADP is getting phosphorlyated to ATP - both sides) - so for each split glucose these reactions are happening twice

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14
Q

The two molecules that split then what happens?

A

G3P continues on in glycolysis
DHAP cant go directly through and must be converted to G3P first

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15
Q

Key reactions for the activation of glucose

A
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16
Q

The splitting or aldolase reaction - what drives to relation of DHAP to G-3-P?

A

G-3-P is used in the energy payoff phase
- keeps concentration low
- drives reaction from DHAP to G-3-P

17
Q

In terms of carbons and number of molecules and numbers of phosphates

A
18
Q

The splitting or aldolase reaction

A
19
Q

What enzyme allows the change from DHAP to G-3-P?

A

Triose phosphate isomerase (rearrangement)

20
Q

How come DHAP and G-3-P aren’t actually at travelling in equal directions (equilibrium)

A

There isn’t 1 mol of each, G-3-P is used in the reaction pathway and therefore the reaction favours making more G-3-P from DHAP

(Always making both and only removing G-3-P)

21
Q

Pathways for processing food molecules for ATP synthesis - Two key types of reactions:

A
  1. Those involving ADP and ATP ATP synthesis: ADP + Pi —> ATP
    a. substrate-level phosphorylation
    • direct (A + ADP —> B + ATP) - energy comes from
      substrate
      b. oxidative phosphorylation - Indirect (reduced co-enzymes)
  2. Redox reactions Fuel molecules get oxidized
22
Q

What is Substrate level phosphorylation (SLP)

A

The DIRECT use of energy from a substrate molecule to drive the synthesis of ATP (or equivalent)

23
Q

How do you release the energy to drive a substrate-level phosphorylation what’s the problem with that?

A

One way to release the energy to drive a substrate-level phosphorylation is the cleavage of a high-energy phosphate ester bond on a substrate

But
But 1 ATP has been spent to add each phosphate on G-3-P….
….and we need a net gain of ATP in glycolysis

24
Q

A key reaction for making an ATP profit: Oxidation of glyceraldehyde-3-phosphate - how does this work?

A
  • NAD+ is reduced (provides oxidising power)
  • phosphate from solution added to substrate

The addition of phosphate is powered by oxidation of G-3-P
The addition of phosphate does not require ATP

  • glyceraldehyde-3-phosphate dehydrogenase uses the energy from the exisiting reaction to add the phosphate

(THIS IS HAPPENING TWICE FOR EACH GLUCOSE MOLECULE)

25
Q

A key reaction for making an ATP profit: the 1 st substrate-level phosphorylation (SLP)

A

The #1 carbon phosphate of 1.3-BPG is very reactive
- phosphate is cleaved (phosphoglycerate kinase) releases energy (ΔG0´= -49.3 kJ/mol)
- energy used for substrate level phosphorylation
ADP + Pi —->ATP (ΔG0´= +30 kJ/mol)

Overall ΔG0´= -19.3 kJ/mol (coupled reaction)

P is also transferred to ADP to make ATP (not what makes it an SLP - its the energy that makes it a SLP)

26
Q

How does arsenic poison glycolysis ?

A
  • Arsenate (AsO4 -3) substitutes for phosphate (PO4-3)
  • Unstable, arsenate hydrolyzed but energy not captured (as the enzyme is not used)
  • ATP not synthesized by phosphoglycerate kinase

No net gain of ATP in glycolysis

27
Q

How do we get form 3PG to PEP (what happens after first SLP)

A

Rearrangement: Getting the molecule into a form that enables the following reactions

28
Q

A key reaction for making an ATP profit: the 2 nd substrate-level phosphorylation (SLP)

A

Phosphate cleaved: releases energy
ΔG0´= - 61.9 kJ/mol

Energy used for substrate- level phosphorylation
ADP + Pi —-> ATP
ΔG0´= +30 kJ/mol

Overall ΔG0´= -31.9 kJ/mol (coupled reaction)

P is also transferred to ADP to make ATP (not what makes it an SLP)

29
Q

Overall reaction for glycolysis

A

Glucose + 2NAD + + 2ADP + 2Pi —-> 2 pyruvate + 2 NADH + 2ATP + 2H+

Glycolysis overall: ΔG0 ´= -73.3 kJ/mol
Pathway is energetically favourable

30
Q

What happens to private under aerobic oxidation (O2 available)

A

Pyruvate is converted to acetyl-CoA to be further metabolized In the citric acid cycle

31
Q

aerobic oxidation - standard thing that will happen -

A

Occurs in the mitochondrial matrix

Pyruvate dehydrogenase (enzyme)reaction
- Multienzyme complex with lots of cofactors/ coenzymes

Net reaction is an oxidative decarboxylation
- CO2 released (decarboxylation; 3C to 2C)
- pyruvate is oxidized, energy captured in NADH and used to
add Coenzyme A (CoA) to two-carbon chain

32
Q

What does it mean Anaerobic glycolysis

A

Low oxygen
- red blood cells, muscles in anaerobic conditions

33
Q

Anaerobic glycolysis of Pyruvate

A

When NADH is oxidised, the energy captured in the coenzyme NADH is lose
Lactate causes muscle fatigue

34
Q

Why is pyruvate transformed into lactate in Anaerobic glycolysis

A
  • low concentration of coenzymes in cells
  • during aerobic oxidation coenzymes are oxidized (regenerated) in oxidative phosphorylation
  • lactate dehydrogenase reaction oxidizes NAD
  • allows for sufficient NAD+ for the glyceraldehyde-3- phosphate dehydrogenase reaction
  • glycolysis can continue to generate ATP