1b. ENZYMES Flashcards

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1
Q

Define what an enzyme is

A

A biological catalyst

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2
Q

How do all enzymes speed up chemical reactions?

A

By lowering the activation energy

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3
Q

Why must enzymes be water soluble?

A

Because most enzyme controlled reactions occur in the cytoplasm or tissue fluid, which are aqueous

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4
Q

Give an example of an extracellular enzyme controlled reaction

A

Digestion

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5
Q

Give an example of an intracellular enzyme controlled reaction

A

Respiration, photosynthesis, protein synthesis

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6
Q

What is the functional part of an enzyme?

A

Active site

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7
Q

What is the 3D shape of an enzyme’s active site determined by?

A

The type and position of the hydrogen, covalent, ionic and disulphide bonds in its tertiary shape

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8
Q

Compare the shape of the substrate and the shape of the active site

A

They are complimentary

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9
Q

When an ESC is formed, what two things are interacting?

A

The substrate and the enzyme

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10
Q

Recall the two theories that describe how enzymes lower activation energy

A

Lock & key and induced fit

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11
Q

In the lock and key model, is the active site always complimentary to the substrate?

A

Yes

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12
Q

In the induced fit model, when is the active site not totally complimentary to the substrate?

A

Before the ESC is formed

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13
Q

Describe how thebinding of the substrate lowers activation energy in the induced fit model

A

As the active site changes shape, it distorts the bondswithin thesubstrate, lowering the activation energy.

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14
Q

Recall the two equations used to calculate rate of reaction

A

Product formed ÷ time & reactant formed ÷ time

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15
Q

Define what Vmax is, and how it’s reached

A

The maximum rate of an enzyme-controlled reaction. It is reached when all the enzyme’s active sites are full.

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16
Q

Explain why enzyme-controlled reactions have a high initial rate

A

Because the most ESC are formed at the beginning of a reaction

17
Q

Describe how to calculate the rate of reaction at a specific point on a graph, if the line is a curve

A

Calculate the tangent of the curve

18
Q

Explain why increasing temperature increases the rate of enzyme-controlled reactions

A

It increases the KE of the particles, which increases the frequency of collisions

19
Q

Explain how changing temperature may affect the rate of an enzyme controlled reaction

A

As temperature increases, rate increases

20
Q

Explain why changing temperature above the optimum may reduce the rate of reaction

A

Because the enzymes may denature

21
Q

Recall the equation to calculate pH

A

pH = -log10 [H+]

22
Q

Explain how changing pH may reduce the number of ESCs formed

A

As pH changes, more H+ causes the charges on the R groups of the amino acids in the active site to change, and the substrate will not be able to bind as easily. Less ESCs formed.

23
Q

Explain why changing pH causes the shape of an enzyme’s active site to change

A

The change in [H+] causes theionic and hydrogen bonds to break, which changes tertiary structure of active site. No ESCs can be formed.

24
Q

Explain why changing substrate concentration changes the rate of an enzyme-controlled reaction

A

It would change the frequency of collisions, changing the rate of ESCs formed

25
Q

Explain why changing enzyme concentration changes the rate of an enzyme-controlled reaction

A

It would change the frequency of collisions, changing the rate of ESCs formed

26
Q

Explain why and when the effect of changing enzyme and substrate concentration will no longer be seen

A

When Vmax is reached, when the reaction finishes, and when the enzyme becomes denatured

27
Q

What is the purpose of inhibitors in your body?

A

To control the rate of metabolic reactions

28
Q

Describe how competitive inhibitors work

A

The inhibtor has a similar shape to the substrate, and binds competitively to the active site, preventing ESCs forming

29
Q

Describe the shape of competitive inhibitors

A

The same as the substrate / complimentary to the active site

30
Q

Explain how Vmax can still be reached when a competitive inhibitor is used

A

By increasing substrate concentration, because this increases the probability of enzyme-substrate collisions

31
Q

Describe how non-competitive inhibition works

A

The bind to an allosteric site on the enzyme, changing the shape of the active site

32
Q

Explain why Vmax cannot be reached when a non-competitive inhibitor is used

A

Because they bind permanently to enzymes, so they are no longer available

33
Q

Describe how a molecule binding to an enzyme may act as an activator

A

It may bind to an allosteric site on the enzyme, changing the 3D shape of the active site to make it complimentary to the substrate