Unit 3 Objectives Flashcards

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1
Q

Define Growth

A

An increase in population size via reproduction (Binary fission)

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2
Q

Is bacterial growth the same as human growth? Explain.

A

Bacterial growth is not the same as human growth;

Human growth involves physical enlargement and cellular differentiation, bacterial growth mainly refers to the reproduction and multiplication of cells.

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3
Q

Describe binary fission

A

A process where a single bacterial cell divides into two identical daughter cells. It begins with the replication of the bacterial chromosome, followed by the elongation of the cell. A septum then forms, splitting the cell into two, each with a copy of the original DNA

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4
Q

List the phases of microbial population growth. Describe what is happening at each phase. Draw & label a typical growth curve. When do you think would be the best time to use an antimicrobial drug? Explain.

A

Lag phase: the getting accustomed period; period of little or no cell division

Log (exponential phase): growth > death; metabolically active

Stationary phase: growth = death; metabolism slows

Death (decline) phase: growth < death; waste accumulates

The best time to use an antimicrobial drug is during the log (exponential) phase because the bacteria are actively dividing, making them more susceptible to the drug’s effects because of cell wall synthesis or DNA replication.

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5
Q

List ways to measure microbial growth. What are the advantages and disadvantages of each of these processes? (Without incubation)

A

Without incubation:

  1. Microscope counts: microscopic counting using a Petroff-Hausser counting chamber, where a sample is placed on a grid slide, and cells are counted to estimate the concentration in milliliters.

Advantage: this method is quick and useful for high cell concentrations
Disadvantage: has limitations, such as difficulty distinguishing between living and dead cells and counting rapidly moving microorganisms.

  1. Electronic counts: like the Coulter counter, count cells as they interrupt an electrical current in a narrow tube making it useful for larger cells such as yeasts and protozoa.

Advantage: its speed and ability to analyze many cells quickly

Disadvantage: its reduced effectiveness for bacterial counts due to debris and clumping in the sample

  1. Flow cytometry: a related technique that uses light-sensitive detectors to analyze cells

Advantage: allows scientists to distinguish and count different types of cells based on fluorescent dyes or antibodies.

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6
Q

List ways to measure microbial growth. What are the advantages and disadvantages of each of these processes? (With Incubation)

A
  1. Serial Dilution and Viable Plate Counts
    Serial dilution involves systematically diluting a liquid culture to reduce the number of cells to a manageable level for counting. Scientists then plate a set amount from each dilution onto agar surfaces and count the colonies that develop to estimate the original population size.

Advantage: ability to accurately estimate the number of viable bacteria
Disadvantage: it may underestimate the count if colony-forming units consist of multiple cells.

  1. Membrane Filtration: used to count microorganisms in low-density samples by filtering a large volume of liquid through a membrane that traps the cells. After filtering, the membrane is placed on a solid medium, where colonies can grow and be counted.

Advantage: its effectiveness for counting low-density populations,
Disadvantage: it may not capture all types of microorganisms due to variations in size and shape.

  1. Most Probable Number (MPN): a statistical approach to estimating bacterial populations based on dilution and growth in multiple test tubes. By inoculating sets of tubes with different dilutions and counting growth after incubation, researchers can reference MPN tables to estimate cell numbers.

Advantage: its usefulness for counting microorganisms that do not grow on solid media
Disadvantage: it requires multiple tubes and incubations, making it time-consuming.

  1. Turbidity: indirect method of estimating microbial population size by measuring the cloudiness of a broth culture, which increases as bacteria reproduce. A spectrophotometer is used to assess how much light passes through the culture, providing an estimate of the cell concentration.

Advantage: its speed and ease of use
Disadvantage: only works well for concentrations above 1 million cells per milliliter and does not differentiate between living and dead cells.

  1. Metabolic Activity: estimates cell numbers based on the rate of nutrient consumption and waste production by a population of microorganisms. By monitoring changes in nutrient levels or waste products, scientists can infer cell density in a culture.

Advantage: it provides real-time estimates of growth
Disadvantage: it may not directly correlate with cell numbers if metabolic rates vary widely among organisms.

  1. Dry Weight: involves filtering microorganisms from a culture, drying them, and weighing the biomass to estimate abundance. This method is particularly useful for filamentous organisms that are hard to count directly.

Advantage: provides a direct measurement of biomass
Disadvantage: it cannot track growth over time since the organisms are killed in the process.

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7
Q

Define photoautotroph

A

Organisms that use light energy to convert carbon dioxide (CO₂) into organic compounds, primarily through the process of photosynthesis. They generate their own food and are capable of producing oxygen as a byproduct

Energy: light (phototroph)
Carbon: CO2 (autotroph)

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8
Q

Define photoheterotroph

A

Organisms that obtain energy from light but rely on organic compounds for carbon sources, rather than fixing carbon dioxide. They use light to enhance their growth but cannot synthesize all necessary organic molecules from CO₂ alone.

Energy: light (phototroph)
Carbon: organic (heterotroph)

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9
Q

Define chemoautotroph

A

Organisms that derive energy from the oxidation of inorganic compounds (such as hydrogen sulfide or ammonia) and use this energy to fix carbon dioxide into organic compounds. They are often found in extreme environments where sunlight is not available.

Energy: chemical (chemotroph)
Carbon: CO2 (autotroph)

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10
Q

Define chemoheterotroph

A

Organisms that obtain both energy and carbon from organic compounds. They cannot synthesize their own food and must consume other organisms or organic matter for survival.

Energy: chemical (chemotroph)
Carbon: organic (heterotroph)

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11
Q

Define organotroph

A

Organisms that obtain electrons from organic substrates. They typically rely on organic compounds for energy and growth, often breaking them down through metabolic processes.

Electrons: organic (organotroph)

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12
Q

Define lithotroph

A

Organisms that obtain electrons from inorganic substances, such as minerals or metals. They can utilize these inorganic compounds in their metabolism to generate energy.

Electrons: inorganic (lithotroph)

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13
Q

How do environmental factors (oxygen levels) affect microbial growth & how can we use this information for practical application.

A

-Aerobic bacteria require oxygen for respiration
-Anaerobic bacteria grow in its absence
-Facultative anaerobes can thrive in both conditions.
-Application: Understanding oxygen requirements helps in the selection of appropriate growth media and conditions for culturing specific bacteria

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14
Q

How do environmental factors (osmotic pressure) affect microbial growth & how can we use this information for practical application.

A

-High osmotic pressure (hypertonic environments) can cause plasmolysis (shrinkage of the cell)
-Low osmotic pressure (hypotonic environments) can lead to lysis (bursting of the cell).
-Application: Food preservation techniques, like salting or sugaring, exploit osmotic pressure to inhibit microbial growth by creating hypertonic environments, effectively preserving food.

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15
Q

How do environmental factors (temperature) affect microbial growth & how can we use this information for practical application.

A

Each microbial species has an optimal growth temperature.

-Psychrophiles grow best in cold environments
-Mesophiles in moderate temperatures
-Thermophiles in hot conditions.

Extreme temperatures can denature enzymes and inhibit growth.

Application: Temperature control is vital in food storage, clinical settings, and industrial processes. For example, refrigeration slows down the growth of mesophilic bacteria in food, while pasteurization uses heat to kill pathogenic organisms.

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16
Q

How do environmental factors (pH) affect microbial growth & how can we use this information for practical application.

A

Microbes have an optimal pH range for growth. Most bacteria prefer a neutral pH (around 7), while some can thrive in

-Acidic (acidophiles)
-Alkaline (alkaliphiles) environments.

Application: The pH of growth media can be adjusted to favor specific microbial growth or inhibit unwanted microbes. For example, acidic conditions can be used to preserve foods, as many pathogens cannot survive in low pH.

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17
Q

How do environmental factors (salt concentrations) affect microbial growth & how can we use this information for practical application.

A

High salt concentrations can inhibit growth by creating osmotic stress. Some bacteria, known

-Halophiles, can thrive in high-salt environments, while others cannot tolerate it.

Application: Salting is a method used in food preservation. Additionally, understanding salt tolerance can help in biotechnological applications, such as the production of enzymes from halophilic organisms for use in high-salt conditions.

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18
Q

How do environmental factors (hydrostatic pressure) affect microbial growth & how can we use this information for practical application.

A

Increased hydrostatic pressure can affect microbial growth, particularly in deep-sea environments.

-Barophiles can thrive under high pressure, while many organisms cannot.

Application: Knowledge of hydrostatic pressure is essential for deep-sea microbial studies and bioprospecting for novel enzymes that function under extreme conditions.

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19
Q

How can oxygen be toxic to some organisms, yet others can tolerate the toxic effects ?

A

Oxygen can be toxic to some organisms, like anaerobic bacteria, because they lack the necessary enzymes to neutralize the harmful byproducts of oxygen metabolism, known as reactive oxygen species (ROS), which can damage their cellular components

20
Q

List the toxic oxygen forms & how these toxic forms can be neutralized

A
  1. Hydrogen peroxide can be neutralized by peroxidase converting it into water
  2. Superoxide radical (O2-) can be neutralized by superozide dismutase (SOD) converting it to hydrogen peroxide (H₂O₂) and oxygen (O₂).
  3. Hydrogen peroxide (H2O2) can be neutralized by catalase breaking it down into water and oxygen.
  4. Singlet oxygen can be neutralized by carotenoids converting it into a less reactive form
21
Q

What are the organisms that need or don’t need oxygen for metabolism?

A

Need:
21%
Obligate aerobe (atmospheric levels)
Facultative anaerobe (can grow with or without oxygen)

2-10%
Microaerophile (higher concentrations are toxic)

Don’t need:
0%
Obligate anaerobe (oxygen is toxic to them)
Aerotolerant (do not use but can tolerate)
Facultative anaerobe (with or without)

22
Q

How can microbiologists grow obligate anaerobes in a laboratory setting?

A
  1. Reducing Media:
    • such as thioglycollate broth, which contains chemicals that react with and remove oxygen.
  2. GasPak Systems:
    • includes an airtight container with a GasPak envelope that, when activated, generates hydrogen and carbon dioxide. The hydrogen reacts with oxygen to form water, creating anaerobic conditions.
23
Q

What do each of the organisms look like in test tubes? (oxygen at top none at bottom)

A

Obligate aerobes: all at top

Obligate anaerobes: all at bottom

Facultative anaerobes: more at top some at bottom

Microaerophiles: right under surface

Aerotolerant anaerobes: all throughout

24
Q

Describe structural components of a biofilm

A

Biofilms are mixed microbial communities

Structural components of biofilm:
2% DNA (~0.1-1)
2% polysaccharides (~40-90)
2% proteins (~5-30)
90% water

self-produced extracellular matrix, mainly consisting of polysaccharides, proteins, and DNA. (EPS) help in adhering the biofilm

25
Q

Where are typical locations where biofilms form?

A

Locations: Aqueous environments

  • teeth (plaque)
    -medical devices (catheters, prosthetics)
    -pipes and water systems
    -natural environments (rocks)
    -tissues (lungs; cystic fibrosis)
26
Q

How is quorum sensing involved in biofilm formation?

A

Quorum sensing is a cell-to-cell communication process that bacteria use to detect and respond to population density via signaling molecules (autoinducers).
As bacteria multiply, they produce signaling molecules, which increase in concentration as the population grows.
Once a threshold concentration is reached, the bacteria collectively activate genes related to biofilm formation

27
Q

What are ways to prevent biofilm from forming?

A
  1. Surface Modifications:
    Coating medical devices or surfaces with anti-adhesive or antimicrobial materials to prevent bacterial attachment.
  2. Physical Disruption:
    Regular cleaning and scrubbing of surfaces can prevent biofilm formation.

Chemical Treatments:
3. Using antimicrobial agents or enzymes that disrupt the biofilm matrix or kill bacteria within the biofilm.

  1. Inhibiting Quorum Sensing:
    Developing quorum sensing inhibitors (QSIs) to disrupt bacterial communication, preventing biofilm formation or dispersing existing biofilms.
28
Q

Describe how to perform a streak for isolation method properly. If improperly done, then identify the problem that may have occurred & describe how it could be corrected when performed again.

A

Flame loop
Get bacteria
Zig zag it 1
2: take from one
3: take from 2
4: take from 3, don’t touch one

Too much?: didn’t sanitize loop with every step or streaks were too heavy

Contaminated: didn’t sanitize loop or left lid open to wide or for too long

Contaminated on ends?: wet or upside down incubation

Too much on end?: touched 4 to 1

29
Q

How do you know that a colony on the streak plate is pure?

A

Same size, shape, color, and texture of colonies

Microscope: similar morphologies

30
Q

What are the pros and cons of each type of medium? (plate, broth, deep, slant)

A
  1. Agar Plates
    Pros:
    -Allows for observation of colony morphology.
    -Can support a wide variety of growth conditions (selective, differential)
    - Easy to isolate pure colonies from mixed samples.

Cons:
- May not be suitable for strict anaerobes unless specific anaerobic conditions are provided.
- Colonies may be small and hard to observe depending on the species.

  1. Broth Cultures
    Pros:
    - Provides a larger surface area for bacterial growth, often leading to higher yields.
    - Easier to mix and distribute nutrients and oxygen (in aerobic cultures).
    - Useful for growing organisms that require liquid environments.

Cons:
- Difficult to isolate single colonies from mixed cultures.
- Lack of visible colony morphology, making identification more challenging.

  1. Deep Cultures
    Pros:
    - Suitable for determining the oxygen requirements of microorganisms (aerobic vs. anaerobic).
    - Can be used to study motility of bacteria, as growth patterns indicate movement through the medium.

Cons:
- Limited visualization of colony characteristics.
- Requires careful inoculation techniques to avoid contamination.

  1. Slant Cultures
    Pros:
    - Provides a solid surface for longer-term storage of cultures and can support aerobic and anaerobic growth.
    - Useful for isolating and preserving microbial cultures over time.

Cons:
- Less suitable for quantitative studies or isolating colonies.
- Limited space for growth compared to plates, which can hinder identification of distinct colonies.

31
Q

Describe what makes a medium selective, differential or enriched.

A

Selective Media: Inhibit unwanted microbes and promote specific ones.

Differential Media: Distinguish between microorganisms based on metabolic activities

Enriched Media: Provide additional nutrients to support the growth of fastidious organisms

32
Q

CNA Classification:

A

Type: Selective

Selective for gram-positive bacteria

Differentiates hemolytic species if made with blood

If it includes blood:

Beta Hemolytic: colorless; transparent zone around colony

Alpha Hemolytic: greenish or brownish around colony

Gamma Hemolytic: no zone around colony

33
Q

EMB Classification:

A

Type: Both Selective and Differential;

Selective for gram-negative bacteria

Differential for lactose fermenters (producing a color change).

Dark colonies with green metallic sheen: E. coli or C. freundii

Colonies with dark purple or black centers: lactose fermenters

Colorless colonies: non- lactose fermenters

34
Q

MacConkey Agar Classification:

A

Type: Both Selective and Differential

Selective for gram-negative bacteria

Differential for lactose fermenters

Dark purple colonies: lactose fermenters

Cloudy agar around purple colony: precipitation of bile salts due to reduced pH (accompanies lactose fermentation)

Colorless colonies: non-lactose fermenters

35
Q

Mannitol Salt Agar (MSA) Classification

A

MSA (Mannitol Salt Agar)

Type: Both Selective and Differential

Selective for Halophiles (staphylococci) (high salt concentration)

Differential for mannitol fermentation

Yellow medium around growth: mannitol fermenter

Pink/red medium around growth: non-mannitol fermenter

36
Q

Blood agar; TSA w/ 5% sheep blood Classification:

A

Type: Differential

Allows for differentiation based on hemolysis patterns (alpha, beta, or gamma hemolysis) but is not selective.

All organisms grow

No change in medium around growth: Gamma (no hemolysis)

Green (or brown) around growth: Alpha (partial)

Colorless, transparent around growth: Beta (complete) hemolytic

37
Q

Why is it advantageous for a pathogen to have hemolysins?

A

Nutrient Acquisition: Release iron and nutrients from lysed red blood cells for growth.

Immune Evasion: Damage or kill immune cells, reducing the host’s immune response.

Tissue Damage: Cause local tissue destruction, promoting further infection.

Formation of Infections: Create environments that support bacterial growth and colonization.

Enhanced Virulence: Increase the overall ability of the pathogen to cause disease.

38
Q

What is the CA, AT, and MOT for Septicemia?

A

CA: Various bacteria (S. aureus, S. pneumoniae, E. coli, S. pyogenes, P. aeruginosa etc.)

AT: Bacterium (B)

MOT: direct entry into wounds

39
Q

What is the CA, AT, and MOT for Endocarditis?

A

CA: Streptococcus, Staphylococcus

AT: Bacterium (B)

MOT: bacteria entering the blood stream

40
Q

What is the CA, AT, and MOT for the Plague?

A

CA: Yersinia pestis

AT: Bacterium (B)

MOT: flea bites from infected rodents or respiratory droplets

41
Q

What is the CA, AT, and MOT for Lyme disease?

A

CA: Borrelia burgdorferi

AT: Bacterium (B)

MOT: tick bites (lxodes scapularis or deer ticks)

42
Q

What is the CA, AT, and MOT for Infectious Mononucleosis?

A

CA: Epstein-Barr virus (EBV)

AT: Viral (V)

MOT: saliva (kissing, sharing drinks)

43
Q

What is the CA, AT, and MOT for Yellow Fever?

A

CA: Yellow fever virus

AT: Virus (V)

MOT: mosquito bites

44
Q

What is the CA, AT, and MOT for Dengue Fever?

A

CA: Dengue virus

AT: Viral (V)

MOT: mosquito bites

45
Q

What is the CA, AT, and MOT for Malaria?

A

CA: Plasmodium species (e.g., P. falciparum)

AT: Protozoan (P)

MOT: mosquito bites

46
Q

What is the CA, AT, and MOT for Toxoplasmosis?

A

CA: Toxoplasma gondii

AT: Protozoan (P)

MOT: ingestion of oocysts from cat feces, contaminated food, or water