Revision notes: 1. Genetics Flashcards
DNA replication. Which enzyme unwinds double-stranded DNA
DNA helicase
Which enzyme is involved in copying DNA during replication
DNA polymerase
Which enzyme is involved with reattaching DNA strands
DNA ligase
4 stages of the cell cycle
G1 –> S (synthesis) –> G2 –> M (mitosis
Stages of mitosis
Prophase - Chromatins condense
Metaphase - Nuclei disappear, nuclear membrane disintegration, mitotic spindles form and chromosomes align at metaphase plate
Anaphase - ‘kinetochore’ microtubules shorten, splitting the chromatids
Telophase - chromosomes decondense, nuclear membranes reform
Trisomy 21 - genetic causes
Down’s syndrome
95% - primary trisomy 21 - non-dysjunction at meiosis
3% - robertsonian translocation of chromosomes 14 and 21
1% - mosaicism
Features of Down’s
Raised nuchal translucency
Dysmorphic features: small ears, upslanting palpebral fissures, flat facial profile, brachycephaly
Hypotonia
Cardiac abnormalities - ASD, VSD, persistent ductus arteriosus, tetralogy of fallot
GIT abnormalities: Duodenal atresia, imperforate anus, hirschsprung’s disease
Conductive hearing loss
Long-term diseases associated with Down’s
Alzheimer’s
AML/ALL
Hypothyroidism
Maternal risk of Down’s
25 years old: 1:1500
30: 1:900
35: 1:350
40: 1:100
45: 1:30
50: 1:11
Trisomy 18
Edward’s syndrome
Edwards syndrome: Prevalence and M:F ratio
1:3000 live births, M:F 1:2
Edwards: MSK defects
Rockerbottom feet, overlapping fingers, limb defects
Edwards: facial defects
Micrognathia, cleft lip, cleft palate
Edwards: cardiac defects
VSD
ASD
Patent ductus arteriosus
Edwards: Abdominal defects
Exomphalos
Inguinal hernia
Diaphragmatic hernia
Renal malformations
Edwards: intrauterine
Causes intrauterine growth restriction
Edwards: mortality rates
1 month: 30%
2 months: 50%
1 year: 90%
Trisomy 13
Patau’s syndrome
Prevalence of Patau
1:5000
Increases with maternal age
Features of Patau
MIDLINE: Hypotolerism (eyes close together) Holoprosencephaly (failure of prosencephalon to develop into two hemispheres Cleft lip Cleft palate Scalp defects
Post-axial polydactyly Congenital heart defects Renal abnormalities Omphalocele Intrauterine growth restriction
Mortality rate Patau
Almost 100% by 1 month of age
Sex chromosome aneuploidies examples
Klinefelter (XXY)
Turner (X0)
Turner’s syndrome: prevalence
1:2500 female live births
Features of Turner’s syndrome
Raised nuchal translucency Cystic hygroma Lymphoedema Neck webbing Short stature Shield shaped chest, widely spaced nipples Coarctation of aorta Gonadaldysgenesis Renal abnormalities inc horseshoe kidney Intellectually NORMAL Risk of gonadoblastoma
Klinefelter’s syndrome, incidence
1:1000 live births
Features of Klinefelter’s
Tall
Small testes, hypogonadotrophic hypogonadism
Infertility
Structural chromosomal abnormalities caused by deletion: 22q11 (+ features)
DiGeorge syndrome
Immune deficiency Hypocalcaemia due to parathyroid dysfunction Autism Congenital heart disease Cleft lip +/palate
Structural chromosomal abnormalities caused by deletion: 15q11-13 - maternal
Angelman
Happy! Macroglossia Ataxia Seizures Learning difficulties
Structural chromosomal abnormalities caused by deletion: 15q11-13 - paternal
Prader-Willi
Obese
Hypogonadism
Hypotonia
Give some examples of autosomal dominant inherited conditions
Myotonic dystrophy Huntington's Tuberous Sclerosis Polycystic Kidney Disease Neurofibromatosis 1 + 2 Achondroplasia Marfan's syndrome Osteogenesis imperfecta Porphyria
Examples of autosomal recessive conditions
Cystic Fibrosis Sickle cell disease Thalassaemia Phenylketonuria Glycogen storage disorders Congenital adrenal hyperplasia Wilson's disease
Examples of X-linked recessive conditions
G6PD deficiency
Duchenne muscular dystrophy
Fragile X syndrome
Christmas disease (factor XI deficiency)
Haemophilia A + B (factors VIII + IX deficiency)
Neurogenic diabetes insipidus
Lesch-Nyhan syndrome (excess uric acid - gout, kidney stones, a bit dumb)
Wiskott-Aldrich syndrome (immune deficiency, thrombocytopenia, eczema)
X-linked recessive inheritance
1:2 sons of carrier females
X-linked dominant: inheritance
1:2 offspring of affected females
X-linked dominant conditions
Severe in males: neonatal death
Incontinentia pigmenti
Rett syndrome
Vitamin D resistance rickets (otherwise known as hypophosphatemic rickets)
Mitochondrial inheritance - features
Can affect both sexes but only passed on by affected mothers
Examples of mitochondrial conditions
Leber’s hereditary optic neuropathy
Leigh’s syndrome - psychomotor regression
What is tuberous sclerosis
Rare multisystem genetic disease causing tumour growth
Tuberous sclerosis genetics
Mutation in either:
TSC1 (codes for hamartin) on chromosome 9
TSC2 (codes for tuberin) on chromosome 16
These proteins suppress tumour growth. Therefore mutations lead to tumours
Features of tuberous sclerosis
Angiofibromas
Hypomelanotic macules
Shagreen patches (leathery patches of skin)
Ungal fibromas
Brain: Subependymal nodules, cortical tubers, epilepsy
Learning difficulties
Cardiac rhabdomyomas
Renal angiomyolipomas
Learning difficulties
Cystic fibrosis genetics
Mutation in CFTR (CF transmembrane conductance regulator)
Chromosome 7
DeltaF508 is most common mutation
Sickle cell disease: genetic cause
Point mutation in beta globin chain of haemoglobin
Complications of sickle cell
Vaso-occlusive crisis Acute chest syndrome Aplastic crisis Splenic sequestration crisis Haemolytic crisis (common in patients with co-existing G6PD deficiency)
Types of alpha-thalassaemia
1 gene affected: silent carrier
2 genes: trait - mild hypochromic anaemia
3: Haemoglobin H disease - moderate anaemia and splenomegaly
4: Bart’s hydrops - intrauterine death
Features of Beta-thalassaemia
Fatigue
Anaemia
Jaundice
Shortness of breath
Hepatosplenomegaly due to extramedullary haematopoiesis
Haemochromatosis - excess gut iron absorption
QUADRUPLE TEST components
B-HCG
Inhibin
AFP
Unconjugated oestriol
Down’s - quadruple test results
DECREASED AFP, UNCONJUGATED OESTRIOL
INCREASED B-HCG, INCREASED INHIBIN
Earliest appropriate gestational age to perform CVS
11 weeks
BRCA1 Breast cancer risk
60-90%
BRCA2 Breast cancer risk
45-80%
BRCA1 Ovarian cancer risk
40-60%
BRCA2 Ovarian cancer risk
10-30%
Which chromosomal abnormality has a known association with severely impaired semen quality?
Microdeletions on Y chromosome
Spermatogenesis. Which cells can undergo mitotic division
Spermatogonia
Combined test. When offered?
10-14 weeks
Often carried out at same time as 12 week scan
Quadruple blood test, when offered
14-20 weeks
Not as accurate as combined test
Combined test - findings in down’s
Raised nuchal translucency
Increase B-HCG
Low PAPP-A
Syndrome caused by microdeletion of chromosome 5
Cri-du-chat
Quadruple blood test findings in Edwards
ALL reduced
Incidence of phenylketonuria
1 in 14,000
Treatment of phenylketonuria
Dietary restriction of phenylalanine
When to commence folic acid in beta thalassaemia patients
3 months prior to conception
When should the Guthrie inhibition assay be taken
> 12hours after delivery
Most common enzyme deficiency in CAH
21-hydroxylase
Inheritance pattern of Lynch syndrome
Autosomal dominant
CAH gene mutation
CYP21A
What is the correct description of a chromosome when the p and the q arms are the
same length around the centromere?
Metacentric
How many genes are there in the human genome?
Approximately 20000
In meiosis, when does recombination of genetic material occur when considering
gamete production?
Prophase 1
Which of the following statements describes meiosis?
a. Two daughter cells are generated which are genetically identical
b. Four daughter cells are generated which are genetically identical
c. Two daughter cells are generated from one dividing germ cell
d. Four daughter cells are generated from one dividing germ cell
e. One polar body is generated from one dividing germ cell
d. Four daughter cells are generated from one dividing germ cell
Rocker bottom feet are associated with
Edward’s
Karyotype results from CVS or fetal blood
Takes 48-72hrs
Amniocentesis result back in
2-3 weeks
Clinical features of myotonic dystrophy
Frontal balding Distal muscle weakness Sterno-mastoid weakness Gonadal atrophy Cardiac conduction defects Difficulty relaxing a clenched fist Cardiac conduction defects Retinopathy
Pre-natal diagnosis of congenital adrenal hyperplasia
17-HP concencration in amniotic fluid
OR
DNA analysis from CVS or amnio
Aneuploidy associated with Hashimoto’s
Turner’s
Chromosomes involved in robertsonian translocation
Acrocentric:
13, 14, 15, 21, 22
Telocentric chromosomes
Not seen in humans
centromere at one end
Osteogenesis imperfecta inheritance pattern
Autosomal dominant
AIS 46XY phenotype?
Female phenotype, normal breast development, absent uterus with blind-ending vagina; paucity of pubic and axillary hair
Complications of AIS
Inguinal hernias
Abdominal/inguinal canal testes —> inc risk gonadoblastoma
Haemoglobin electrophoresis - normal ranges
- HbA 1: 95%-98%
- HbA 2: 1.5%-3.5%
- HbF: < 2% (age-dependent)
- HbC: Absent
- HbS: Absent
Cystic fibrosis caucasian carrier rate
1:25