Microbiology Flashcards
Site of Campylobacter jejuni infection
Usually infects caecum and terminal ileum.
Relation of lymph with campylobacter jejuni
Local
lymphadenopathy is common
Extra intestinal manifestations of campylobacter jejuni
lymphadenopathy,
Reactive arthritis is seen in 1-2% of cases
What are Enterobacteriaceae organisms?
The Enterobacteriaceae are a large family of Gram-negative bacteria, including many of the more familiar pathogens, such as Salmonella, Shigella and Escherichia coli. Members of the Enterobacteriaceae are bacilli (rod-shaped), facultative anaerobes, fermenting sugars to produce lactic acid
Treatment of shigella
Usually self limiting, ciprofloxacin may be required if
individual is in a high risk group
Disease by shigella
Clinically causes dysentery
Transmission of salmonella
usually transmitted by infected meat
(especially poultry) and eggs
Types and disease of E coli
Enteropathogenic
Enteroinvasive: dysentery, large bowel
necrosis/ulcers
Enterotoxigenic: small intestine, travelers diarrhoea
Enterohaemorrhagic: 0157, cause a haemorrhagic
colitis, haemolytic uraemic syndrome and thrombotic
thrombocytopaenic purpura
Cause of travellers diarrhoea and site
Enterotoxigenic E coli
Small intestine
Which E coli causes TTP
Enterohemorrhagic E coli O157
Shape of Yersinia
enterocolitica
coccobacilli
Gram test of iYersinia
enterocolitica
Negative
Disease of Yersinia enterocolitica
Typically produces a protracted terminal ileitis that
may mimic Crohns disease
Treatment of Yersinia
enterocolitica
Usually sensitive to quinolone (inhibits DNA gyrase and topoisomerase IV, to prevent DNA replication -nalidixic acid, ciprofloxacin, levofloxacin and moxifloxacin) or tetracyclines (binding to the 30S inhibits protein synthesis-Doxycycline,Minocycline)
Severe complication of Yersinia enterocolitica
Septicemia
Surgical DD of Yersinia enterocolitica
Appendicitis
Symptoms of cholera
Symptoms include sudden onset of effortless
vomiting and profuse watery diarrhoea
What is the mechanism of action of macrolides?
Inhibits protein synthesis
What is P450 inhibitor
A cytochrome P450 (CYP450) inhibitor is a substance that prevents the activity of enzymes in the liver and intestines that metabolize drugs, hormones, and other substances. CYP450 inhibition is a common cause of drug-drug interactions
What does the P450 enzyme do?
The cytochrome P450 family is a group of enzymes found mainly in the liver which perform oxidation and reduction reactions using iron. These reactions are part of phase 1 metabolism enhancing water solubility thus aiding excretion.
Adverse effects of erythromycin
•gastrointestinal upset
•cholestatic jaundice: risk may be reduced if erythromycin stearate is used
•P450 inhibitor
Antibiotics Inhibit cell wall formation
penicillins
cephalosporins
Antibiotics Inhibit protein synthesis
aminoglycosides (cause misreading of mRNA)
chloramphenicol
macrolides (e.g. erythromycin)
tetracyclines
fusidic acid
Antibiotics Inhibit DNA synthesis
Queen’s DNA in a Sulphur containing Metro
quinolones (e.g. ciprofloxacin)
metronidazole
sulphonamides
trimethoprim
Antibiotics Inhibit RNA synthesis
rifampicin
Examples of protein synthesis inhibitors aminoglycosides
gentamicin, tobramycin, amikacin, plazomicin, streptomycin, neomycin, and paromomycin
Benefits of protein synthesis inhibitor chloramphenicol
Chloramphenicol is a widely used topical ointment applied routinely to suture lines and skin grafts, particularly those on the face and around the eyes (bacterial conjunctivitis),otitis externa,also been used for the treatment of typhoid and cholera.
Examples of protein synthesis inhibitor. Macrolides
Erythromycin
Clarithromycin
Azithromycin
Examples of protein synthesis inhibitor tetracycline
Doxycycline
Minocycline
Along with tetracycline itself
Something about protein synthesis inhibitor fusidic acid
Fusidic acid is most effective against gram-positive organisms, such as staphylococcus aureus and staphylococcus epidermidis, including methicillin-resistant staphylococcus aureus (MRSA).
some examples of sulfonamides with caution
Sulfamethoxazole/trimethoprim
Sulfasalazine
Furosemide
Caution
They can interact dangerously with other drugs, including prescription and over-the-counter medications, and PABA sunscreens.
Which organism is transported to humans through eating watercress.
Fasciola hepatica
What is Fasciola hepatica
(parasitic trematode)
illness phase of fasciola hepatica
2 acute and chronic
Acute symptoms of fasciola hepatica
during the acute phase, the immature worms
begin penetrating the gut, causing symptoms of fever, nausea, swollen liver,
skin rashes, and extreme abdominal pain.
Chronic symptoms of fasciola hepatica
The chronic phase occurs when
the worms mature in the bile duct, and can cause symptoms of intermittent
pain, jaundice, and anemia.
Treatment of Fasciola hepatica
Treatment is with triclabendazole. Some patients may need ERCP
common cause of food borne illness
C. Perfringens
its ability to form
spores may make it relatively resistant to cooking
Basis of MRSA
mec Operon
toxic shock syndrome causing bacteria
Staphylococcus aureus
Protector of staphylococcus aureus against antibiotics
Beta lactamase
mec Operon
By what does streptococcus pyogens destroy tissue
Streptokinase
Hyaluronidase
Importance of superantigen released by streptococcus pyogens
superantigens such as pyogenic exotoxin A which results in
scarlet fever
Urease secreting bacteria
Helicobacter pylori
Bacteria a
Which bacterial septicaemia is associated with carcinoma of the colon
Streptococcus bovis
both aerobic and anaerobic organisms must be present In which infection
Fournier’s gangrene
What is advancing soft tissue infection associated with fascial necrosis
Necrotising fasciitis
Haemorrhagic bullae mostly found in which type of infection
Necrotising fascitis
Dirty Dishwater fluid discharge from Which infection
Necrotising fascitis
Treatment of necrotising fascitis
Radical surgical debridement
Sterile dressing
Reconstructive surgery
Diarrhea of immunocompromised
Mostly by cryptosporidium
Also
Salmonella
Shigella
Campylobacter
Which infection may complicate administration of broad spectrum antibiotics and produce foul smelling diarrhea
Clostridium deficile
Contamination of Salmonella
Food
Poultry, eggs
Contamination of vibrio cholerae
Contaminated water
Sea food
painless penile ulcer and marked inguinal
lymphadenopathy. lesion is sent for microscopy.
Treponema pallidum
What lesions characteristically affect the proximal aspect of the
aorta and can result in atypical aneurysms
Syphilic
typical lesion of primary syphilis
chancre which appears after
10-90 days. It is an indurated papule that breaks down to form an ulcer.
How syphilis can mimic carcinoma
The appearances of a hard ulcer with enlarged
regional lymph nodes can mimic carcinoma.
Jarisch- Herxheimer reaction associated with Which disease
Treatment of syphilis can precipitate a Jarisch- Herxheimer reaction with fever and
malaise occurring after treatment has been started and is due to the release
of antigens as the organisms die.
Precautions to prevent SSI (surgical site infection)
Preoperatively
Don’t remove body hair routinely
If hair needs removal, use electrical clippers with single use head (razors
increase infection risk)
Antibiotic prophylaxis if:
- placement of prosthesis or valve
- clean-contaminated surgery
- contaminated surgery
Use local formulary
Aim to give single dose IV antibiotic on anaesthesia
If a tourniquet is to be used, give prophylactic antibiotics earlier
Intraoperatively
Prepare the skin with alcoholic chlorhexidine (Lowest incidence of SSI)
Cover surgical site with dressing
A recent meta analysis has confirmed that administration of supplementary
oxygen does not reduce the risk of wound infection. In contrast to previous
individual RCT’s(1)
Wound edge protectors do not appear to confer benefit (2)
Post operatively
Tissue viability advice for management of surgical wounds healing by secondary
intention
statement relating to actinomycosis
gram positive bacilli
may be a cause of chronic multiple abscesses
Abdominal cases may develop in the appendix
Open biopsy of the lesions is the best diagnostic test
They are facultative anaerobes
difficult to culture
easiest way to
make a diagnosis of actinomycosis infection
Direct visualisation
of organisms and sulphur granules from lesions themselves
Which lessons contain Sulphur granules
Actinomycosis
DD of actinomycosis
hydradenitis
supprativa,
particularly if it is occurring in odd locations and with deeper
abscesses than usual.
Which infection has evidence of both worms and eggs in the stool.
Ascaris lumbricoides
Enterobiasis treatment
Mebendazole
Site of infection of hookworm
proximal small bowel
Stool findings difference between round and hook worn
Round has both larva and eggs
Hook has only larva
Treatment of hookworm
Mebendazole
Infection of hookworm
Infection occurs as a result of cutaneous
penetration
Infection of roundworms
Infections begin in gut following ingestion,
Which nematode may cause autoinfection
Strongyloidiasis
Cryptosporidium type
Protozoa
Spread of Cryptosporidium
Organisms produce cysts which are excreted and
thereby cause new infections
Which hepatic disease will have pain, fever and jaundice
Cholangitis
Courvoisier’s Law
painless
jaundice with
palpable
gallbladder
Mirizzi syndrome
In Mirizzi syndrome
the stone may compress the bile
duct directly- one of the rare
times that cholecystitis may
present with jaundice
Most common cause of cholangitis
Ascending infection of the bile
ducts usually by E. coli and by
definition occurring in a pool of
stagnant bile.
Basis of TPN jaundice
hepatic dysfunction
and fatty liver which may occur
with long term TPN usage.
severe peritoneal infections, pus has a pungent aroma. Which organism
Bacteroides fragilis
Echogenicity of amebic liver? Haemangioma
hyperechoic
Which liver disease is Linked to use of oral contraceptive pill
Liver cell
adenoma