Gene Expression Flashcards

1
Q

Constitutive gene expression?

A

When genes are not under any control. Constitutive: having the power to establish or give organized existence to something:

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2
Q

Basal Transcription?

A

A minimal amount of transcription until it reaches the operon where regulation stops transcription.

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3
Q

What is the only way to have absolute zero transcription?

A

When the promotor is destroyed.

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4
Q

Environmentally regulated gene expression?

A

If the environment controls transcription.

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5
Q

Logic of gene regulation?

A

Cells don’t waste energy making proteins that they don’t need.

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6
Q

Where in the DNA strand is the operator located?

A

Upstream or downstream the promotor but right next to it; sometimes overlap.

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7
Q

Positive regulation?

A

•regulator protein binds to an operator and increases transcription. That protein is called the activator.

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8
Q

Negative regulation?

A

•A regulator that binds to the operator but decreases transcription.

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9
Q

How does positive regulation work?

A

The activator that needs to be there first helps sigma bind to the promotor.

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10
Q

How does negative regulation work?

A

A normal situation with sigma, but the repressor blocks RNA polymerase from proceeding.

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11
Q

Operon?

A

A set of coding regions that share the same promotor and terminator, even though they code for more than one genes.

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12
Q

Signals (inducers) can either to transcription?

A

Increase transcription.

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13
Q

Some repressors are expressed how?

A

Constitutive before the operon.

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14
Q

LacZ?

A

Degrades lactose to form glucose and galactose.

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15
Q

LacY?

A

A protein channel that pumps lactose into the cell by facilitated diffusion.

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16
Q

Allosteric enzyme?

A

When the substrate binds other than the active site which could possibly change the shape of the enzyme.

17
Q

Why are repressors not completely attached to the operator?

A

Repressors use non-covalent interactions with DNA, and thee interactions are not permanent.

18
Q

Mal operon?

A

Set of genes that allow bacteria to break down maltose into two glucose molecules.

19
Q

How many proteins does the Mal operon code for? (3•)

A

•Two, •MalP, •MalQ

20
Q

The role of MalP and MalQ?

A

Both of them are used to break down maltose.

21
Q

Type of regulation of Maltose operon?

A

Positive regulation

22
Q

Repressor for the Maltose Operon?

A

MalT

23
Q

Is the repressor of Maltose functional once expressed?

A

No, they are folded.

24
Q

How does an inducer help transcription?

A

It makes a weak promotor act like a strong by helping the sigma factor bind to the promotor.

25
Q

Co-repressor?

A

A signal that causes transcription to go down, like tryptophan.

26
Q

Anabolic-based (synthesis)?

A

Transcribe genes when the cells need more of whatever the proteins make.

27
Q

Steps for determining the type of operon?

A

•If the operon undergoes positive or negative regulation: look at the strength of the promotor.