DNA Repair mechanisms Flashcards

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1
Q

what is mutation

A

an alteration in DNA sequence

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2
Q

classification of mutation

A
  1. Point mutation or base substitution
    Missense mutation
    Nonsense mutation
    Silent mutation
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3
Q

which mutation results in new triplet code for different amino acid

A

missense

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4
Q

which mutation results in triplet code for stop codon (translation terminated prematurely)

A

nonsense

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5
Q

which mutation results in triplet codes for the same amino acid

A

silent

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6
Q

what are the type of base substitutions mutation

A

transitions and tranversion

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7
Q

when pyrimidine replaces pyrimidine or purine replaces purine

A

transitions

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8
Q

when purine and pyrimidne are interchanged

A

transversion

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9
Q

what is the name of mutation that results from insertion or deletion of base pair, loss or addition, frame reading translation is altered

A

Frameshift mutation

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10
Q

somatic mutations occur in which tyoe of cell, are they heritable

A

occur in any cell except germ cells, are not heritable

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11
Q

Germ-line mutations occur in —–, are —-

A

gametes, are inherited

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12
Q

autosomal mutation occur within genes on –

A

autosomes

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13
Q

which mutation arises from normal biological process that alter nitrogenous bases

A

spontaneous mutation

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14
Q

purine and pyrimidines exist in which form?

A

tautomeric forms, increasing their chances of mispairing

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15
Q

loops on the newly synthesized strand results in

A

adding of one nucleotides

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16
Q

loops on temnplate strand results in

A

omission of one nucleotide

17
Q

is there need for repair of mistake in DNA polymerase action

A

no rarely

18
Q

what happens when a 3’ to 5’ exonuclease activity is attached to DNA polymerase

A

it chews back to create a base-paired 3’ OH end on the primer strand

19
Q

Types of DNA damage

A
  1. Deamination
  2. Depurination
  3. Alkylation
20
Q

what is the damage called when C»U or A» hypoxanthine

A

deamination

21
Q

what is the damage from A or G lost

A

depurination

22
Q

guanine oxidizes to 8-oxo-guanine is called

A

Oxidative damage which causes singel and double strand breaks

23
Q

intercalating agents cause

A

indels

24
Q

which damage cause cancer mutation and thymine dimers

A

UV lights

25
Q

what are DNA repair mechanisms

A
  1. BASE excision repair (BER)
  2. Nucleotide Excision Repair (NER)
26
Q

Which repair is primary responsible for removing small, non-helix distorting base lesion from the genome

A

BASE excision repair (BER)

27
Q

which enzyme recognizes and removes damaged base, leaving apyrimidin or apuirnic site

A

DNA Glycosylase

28
Q

which enzyme removes apyrimidinic or apurinic nucleotide leaving a gap in sugar-phosphaet backbone

A

AP Endonuclease

29
Q

which repair mechanism is responsible for bulky, helix-distorting lesions, thymine dimers

A

Nucleotide Excision Repair (NER)

30
Q

what is an accurate mechanism that relies on homology with a sister chromatid to direct DNA synthesis

A

HR

31
Q

What is an error prone mechanism in which ends are processed to make them compatible and then ligated together by recombination

A

NHEJ (NON HOMOLOGOUS END JOINING

32
Q

BRCA 1

A

actiavtes checkpoint

33
Q

BRCA2

A

stimulates recombination

34
Q

wjere is NHEJ most important

A

G1 when no homologous template for recombination is available