BIOTECHNOLOGY Flashcards
WHICH ORGANISATION GAVE THE DEFINITION OF BIOTECHNOLOGY WHICH ENCOMPASSED BOTH THE TRADITIONAL AND MODERN MOLECULAR BIOTECHNOLOGY?
EUROPEAN FEDERATION OF BIOTECHNOLOGY (EFB)
WHAT IS THE DEFINITION OF BIOTECH GIVEN BY EFB?
THE INTEGRATION OF NATURAL SCIENCE AND ORGANISMS, CELLS, PARTS THEREOF AND MOLECULAR ANALOGUES FOR PRODUCTS AND SERVICES
WHAT IS THE MEANING OF GENETIC ENGINEERING?
IT COMPRISES THE TECHNIQUES TO ALTER THE CHEMISTRY OF THE GENETIC MATERIAL TO INTRODUCE INTO THE HOST ORGANISMS AND THUS CHANGE THE PHENOTYPE OF THE HOST ORGANISM
WHAT IS THE MEANING OF BIOPROCESS ENGINEERING?
IT INVOLVES THE MAINTENANCE OF A STERILE ENVIRONMENT AMBIENCE IN CHEMICAL ENGINEERING PROCESSES TO ENABLE THE GROWTH OF THE DESIRED MICROBES IN LARGE QUANTITIES FOR THE MANUFACTURING OF USEFUL SUBSTANCES LIKE ANTIBIOTICS, VACCINES, ENZYMES, ETC
BENEFIT OF SEXUAL REPRODUCTION OVER ASEXUAL REPRODUCTION
SEXUAL REPRODUCTION PERMITS VARIATIONS WHILE ASEXUAL REPRODUCTION PRESERVES THE GENETIC INFORMATION.
THE TRADITIONAL HYBRIDISATION TECHNIQUES OFTEN LEADS TO INCLUSION OF AND MULTIPLICATION OF UNDESIRABLE GENES ALONG WITH THE DESIRED ONE. TURE OR FALSE
TRUE
WHAT ARE THE THREE TECHNIQUES USED IN GENETIC ENGINEERING?
RECOMBINANT DNA
GENE CLONING
GENE TRANSFER
WHICH SEQUENCE IS RESPONSIBLE FOR INITIATING THE DNA REPLICATION?
ORI SEQUENCE KNOWN AS ORIGIN OF REPLICATION
WHAT IS CLONING?
IT REFERS TO INTEGRATING DNA WITH THE PLASMID AND LETTING IT MULTIPLY IN THE HOST CELL TO MAKE MULTIPLE COPIES OF THE RECOMBINANT DNA
WHAT IS PLASMID?
AUTONOMOUSLY REPLICATING CIRCULAR EXTRA CHROMOSOMAL DNA
THE CONSTRUCTION OF FIRST RECOMBINANT DNA EMERGED DUE TO THE
POSSIBILITY OF LINKING A GENE ENCODING ANTIBIOTIC RESISTANCE WITH A NATIVE PLASMID OF SALMONELLA TYPHIMURIUM
WHO MADE THE FIRST RECOMBINANT DNA?
STANLEY COHEN AND HERBERT BOYER IN THE YEAR 1972
CUTTING OF DNA AT SPECIFIC LOCATIONS BECAME POSSIBLE DUE TO THE DISCOVERY OF
RESTRICTION ENZYMES
PLASMID DNA ACTS AS ——–
VECTORS
RESTRICTION ENZYMES ARE ALSO KNOWN AS ——-
MOLECULAR SCISSORS
THE LINKING OF THE ANTIBIOTIC RESISTANCE GENE BECAME POSSIBLE DUE TO ————– ENZYME
DNA LIGASE
WHICH BACTERIA IS CLOSELY RELATED TO SALMONELLA TYPHIMURIUM?
ESCHERICHIA COLI
THE THREE BASIC STEPS INVOLVED IN THE GENETIC ENGINEERING ARE
- IDENTIFICATION OF THE DNA WITH THE DESIRABLE GENES
- INTRODUCTION OF THE DNA INTO THE HOST
- MAINTENANCE OF INTRODUCED DNA IN THE HOST AND TRANSFER OF THE DNA TO ITS PROGENY
IN WHICH YEAR TWO ENZYMES RESPONSIBLE FOR RESTRICTING THE GROWTH OF BACTERIOPHAGE IN E COLI WERE ISOLATED?
1963
HOW E.COLI IS PROTECTED FROM THE RESTRICTION ENZYMES?
IT IS BECAUSE METHYL GROUP IS ADDED DUE TO WHICH THE RESTRICTION ENZYMES CANNOT RECOGNISE THE SEQUENCE, HENCE IT WILL NOT AFFECT THE BACTERIA BUT WILL DEFINITELY AFFECT IF ANY BACTERIOPHAGE INFECTS THE E.COLI
FIRST RESTRICTION ENDONUCLEASE
HIND II
HOW MANY BASE PAIRS SEQUENCE DOES HIND II CUTS?
6 BASE PAIRS
THE RECOGNITION SEQUENCE IS A PALINDROMIC SEQUENCE
TRUE
HOW MANY RESTRICTION ENZYMES ARE KNOWN TODAY? THEY ARE ISOLATED FROM HOW MANY STRAINS?
OVER 900 ENZYMES ARE KNOWN TO US AND THEY ARE ISOLATED FROM 230 STRAINS
EXPLAIN THE NOMENCLATURE OF THE ENZYMES.
EcoRI
- FIRST LETTER - GENUS
- SECOND TWO LETTERS - SPECIES OF THE PROKARYOTIC CELL FROM WHICH THEY WERE ISOLATED
- THE LETTER ‘R’ - STRAIN NAME
- THE ROMAN NUMERAL - THE ORDER IN WHICH IT WAS DISCOVERED
EXONUCLEASE REMOVES THE NUCLEOTIDES FROM ——-
ENDONUCLEASE REMOVES THE NUCLEOTIDES FROM ——-
THE END
AT SPECIFIC POSITIONS WITHIN THE DNA
RESTRICTION ENZYMES ARE CALLED AS ——-
RESTRICTION ENDONUCLEASE - BECAUSE IT REMOVES THE NUCLEOTIDES AT SPECIFIC POSITIONS
WHY STICKY ENDS ARE FORMED?
IT IS BECAUSE STICKY ENDS FACILITATES THE BONDING BETWEEN BOTH OF THE STRANDS AND IT MAY ALSO NOT REQUIRE THE USE OF DNA LIGASE
HOW ARE STICKY ENDS FORMED?
THEY ARE FORMED WHEN THE RESTRICTION ENZYMES CUTS THE STRANDS OF DNA A LITTLE AWAY FROM THE CENTRE BUT BETWEEN THE TWO SAME BASES ON THE OPPOSITE STRANDS
THE DNA FRAGMENTS SO FORMED CAN BE SEPERATED USING THE TECHNIQUE OF ———-
GEL ELECTROPHORESIS
THE DNA IS LOADED AT ——— SITE AND MOVES TOWARDS ———— BECAUSE DNA IS ———- CHARGED MOLECULE
CATHODE
ANODE
NEGATIVELY
THE DNA IS LOADED AT ——— SITE AND MOVES TOWARDS ———— BECAUSE DNA IS
THE DNA IS LOADED AT ——— SITE AND MOVES TOWARDS ———— BECAUSE DNA IS
WHAT IS THE MATRIX MADE UP OF?
IT IS MADE UP OF AGAROSE WHICH IS A NATURAL POLYMER EXTRACTED FROM SEA WEEDS
WHY DO THE DNA FRAGMENTS SEPARATE?
DUE TO DIFFERENCES IN FRAGMENT SIZE
WHICH COMPOUND IS USED TO STAIN TO MAKE THE FRAGMENTS VISIBLE?
ETHIDIUM BROMIDE
WHICH COLOURED BANDS ARE SEEN?
BRIGHT ORANGE
THE SEPARATED BANDS OF DNA ARE CUT OUT FROM THE AGAROSE GEL AND EXTRACTED FROM THE GEL PIECE. THIS STEP IS KNOWN AS:-
ELUTION
THE DNA MULTIPLIES ITS NUMBERS EQUAL TO ITS:-
COPY NUMBER
WHAT CONTROLS THE COPY NUMBER?
ORI SEQUENCE - ORIGIN OF REPLICATION
WHAT IS THE IMPORTANCE OF THE SELECTABLE MARKER?
IT HELPS IN IDENTIFYING AND ELIMINATING THE TRANSFORMANTS AND SELECTIVELY PERMITTING THE GROWTH OF TRANSFORMANTS
WHAT IS TRANSFORMATION?
IT IS A PROCEDURE THROUGH WHICH A PIECE OF DNA IS INTRODUCED IN THE HOST BACTERIUM
THE NORMAL E.COLI CELLS CARRY ANTIBIOTIC-RESISTANT GENES. TRUE OR FALSE
FALSE
WHY SINGLE RECOGNITION SITES ARE PREFERRED?
IN ORDER TO NOT LET THE DNA GET FRAGMENTED
HOW MANY RESTRICTION SITES ARE PRESENT IN pBR322?
8
HOW MANY ANTIBIOTIC RESISTANT SITES ARE PRESENT IN pBR322?
2 - AMPICILLIN AND TETRACYCLINE
SOME ANTIBIOTIC RESISTANT SITES -
AMPICILLIN
TETRACYCLINE
KANAMYCINE
CHLORAMPHENICOL
WHAT IS REFERRED TO AS THE CLONING SITE?
THE SITE WHERE THE DNA IS INSERTED
WHAT IS INSERTIONAL INACTIVATION?
THE INACTIVATION OF THE GENE BY THE INTRODUCTION OF AN ALIEN DNA (NEW GENE) INTO IT
WHAT IS THE BEST METHOD FOR TRANSFERRING GENES INTO PLANTS AND ANIMALS RESPECTIVELY?
USING VECTORS SUCH AS
ARGOBACTERIUM TUMIFACIENS
RETROVIRUS
ARGOBACTERIUM TUMIFACIENS CAUSES ——— IN THE PLANTS?
TUMOR
RETROVIRUS IN THE ANIMALS CAN CAUSE ——– IN THE HUMANS
CANCER
MICRO-INJECTION METHOD IS USED FOR INSERTING THE FOREIGN DNA INTO PLANTS OR ANIMALS?
ANIMALS BECAUSE THEY DO NOT HAVE CELL WALLS ON THEIR OUTER SURFACE
IN A BIOLISTIC OR GENE GUN WHICH METAL IS COATED WITH DNA TO FORM MICROPARTICLES WHICH ARE SUPPOSED TO BE INSERTED?
GOLD OR TUNGSTEN
THE BACTERIAL CELL WALL, PLANT CELL WALL AND FUNGAL CELL WALL ARE DESTROYED BY?
LYSOZYME, CELLULASE AND CHITINASE RESPECTIVELY
RNA AND PROTEINS ARE REMOVED BY ——-
RIBONUCLEASE AND PROTEASE RESPECTIVELY
PCR STANDS FOR:-
POLYMERASE CHAIN REACTION
WHAT IS PCR USED TO?
TO AMPLIFY THE PIECE OF DNA
WHAT ARE THE THREE PROCESSES USED IN PCR?
- DENATURATION (92C)
- ANNEALING (52C)
- EXTENSION (72C)
WHICH DNA POLYMERASE IS USED IN THE PROCESS OF PCR AND FROM WHICH ORGANISM IT IS EXTRACTED?
TAQ POLYMERASE EXTRACTED FROM THE THERMALLY STABLE BACTERIA THERMUS AQUATICUS
THE ANTIBIOTIC RESISTANCE GENE IS ALSO KNOWN AS
SELECTABLE MARKER
THE ULTIMATE AIM OF BIOTECHNOLOGY IS?
TO PRODUCE DESIRABLE PROTEIN
IF ANY PROTEIN ENCODING GENE IS EXPRESSED IN A HETEROLOGOUS HOST, THEN THE PROTEIN IS CALLED
RECOMBINANT PROTEIN
WHAT IS THE IMPORTANCE OF THE CONTINUOUS CULTURE SYSTEM?
THE USED MEDIUM IS CONTINUOUSLY DRAINED FROM ONE SIDE AND FRESH MEDIUM IS ADDED FROM THE OTHER SIDE TO MAINTAIN THE CELLS IN THEIR PHYSIOLOGICALLY MOST ACTIVE STATE I.E THE LOG PHASE (EXPONENTIAL PHASE)
TO PRODUCE THE RECOMBINANT PROTEIN IN LARGE QUANTITIES ———- IS USED
BIOREACTORS
HOW MANY LITRES CAN BE PROCESSED IN THE BIOREACTORS?
100-1000 LITRES
WHAT ARE THE OPTIMAL GROWTH CONDITIONS PROVIDED BY THE BIOREACTOR?
TEMPERATURE, pH, SUBSTRATE, SALTS, VITAMINS AND OXYGEN
MOST COMMON TYPE OF BIOREACTOR IS
STIRRING TYPE
WHY DOES THE STIRRING TYPE OF BIOREACTOR HAVE A CURVED BASE?
TO FACILITATE THE MIXING OF THE REACTOR CONTENTS
IT FACILITATES EVEN MIXING OF THE CONTENTS AND OXYGEN AVAILABILITY THROUGHOUT THE BIOREACTOR
WHICH TYPE OF STIRRING TYPE OF BIOREACTOR IS BETTER?
SPARGED TYPE BECAUSE IT HAS INCREASED SURFACE AREA FOR THE OXYGEN TRANSFER
WHAT DOES THE DOWNSTREAM PROCESS INCLUDE?
SEPARATION AND PURIFICATION
PRODUCTS HAVE TO BE FORMULATED WITH SUITABLE PRESERVATIVES
SUCH CLINICAL FORMULATIONS HAVE TO UNDERGO CLINICAL TRIALS AS IN THE CASE OF DRUGS
STRICT QUALITY CONTROL
PROCESSING AND QUALITY CONTROL TESTING VARY FROM PRODUCT TO PRODUCT
THE MAIN PROCESSES OF BIOTECH ARE
ISOLATION OF DNA
FRAGMENTATION OF DNA BY RESTRICTION ENDONUCLEASE
ISOLATED OF A DESIRED FRAGMENT INTO A VECTOR