173 - 240 Flashcards
Lysine at low pH (pH=1) have….
Select one:
a. no charge at the a-carboxyl group, and two positive charges at the a-and e-amino groups.
b. a negative charge on the a-carboxyl group, a positive charge on the a- amino group and no charge on the e-amino group.
c. a negative charge on the a-carboxyl group, and two positive charges at the a-and e-amino groups.
d. no charge at the a-carboxyl group, a positive charge on the a-amino group and no charge on the e-amino group.
e. no charge at the a-carboxyl group, no charge on the a-amino group and a positive charge on the e-amino group.
a. no charge at the a-carboxyl group, and two positive charges at the a-and e-amino groups.
Which of the following statements are true for the isoelectric form of amino acids?
Select one or more:
a. All the naturally occurring amino acids have one positive and one negative charges.
b. The a-amino group of all the naturally occurring amino acids has a positive charge.
c. The a-carboxyl group of all the naturally occurring amino acids has a negative charge.
a. All the naturally occurring amino acids have one positive and one negative charges.
b. The a-amino group of all the naturally occurring amino acids has a positive charge.
c. The a-carboxyl group of all the naturally occurring amino acids has a negative charge.
At neutral pH a tetrapeptide of glycylalanylarginylglutamate has…
Select one:
a. two positive and three negative charges
b. two positive and one negative charges
c. one positive and one negative charges
d. one positive and two negative charges
e. two positive and two negative charges
e. two positive and two negative charges
Of the 20 standard amino acids, only ___________ is not optically active. The reason is that its side chain ___________.
Select one:
a. alanine; is a simple methyl group
b. glycine; is a hydrogen atom.
c. glycine; is unbranched.
d. lysine; contains only nitrogen.
e. proline; forms a covalent bond with the amino group.
b. glycine; is a hydrogen atom.
The arginyllysylaspartate tripeptide has
Select one or more:
a. its isoelectric point at basic pH.
b. three positive and two negative charges at neutral pH.
c. two positive and two negative charges at its isoelectric point.
a. its isoelectric point at basic pH.
b. three positive and two negative charges at neutral pH.
c. two positive and two negative charges at its isoelectric point.
The chirality of an amino acid results from the fact that its a—carbon…
Select one:
a. is bonded to four different chemical groups.
b. is a carboxylic acid.
c. is symmetric.
d. is in the L absolute configuration in naturally occurring proteins.
e. has no net charge.
a. is bonded to four different chemical groups.
Which of the following statements about formation of cystine is correct?
Select one:
a. There is a peptide linkage between two cysteines.
b. Two –CH2–SH groups are oxidized to form a –CH2–S–S–CH2– disulfide bridge between two cysteines
c. Two cystines are released when a –CH2–S–S–CH2– disulfide bridge is reduced to –CH2–SH.
d. Cystine is an example of a nonstandard amino acid, derived by linking two different standard amino acids.
e. Cystine is formed by the oxidation of the carboxylic acid group on cysteine.
b. Two –CH2–SH groups are oxidized to form a –CH2–S– S–CH2– disulfide bridge between two cysteines
In a highly basic solution, pH = 13, the dominant form of glycine is:
Select one:
a. NH2–CH2–COO-.
b. NH2–CH2–COOH.
c. NH3+–CH2–COOH.
d. NH3+–CH2–COO-.
e. NH2–CH3+–COO-.
a. NH2–CH2–COO-.
For amino acids with neutral side chain, at any pH below the pI of the amino acid, the population of amino acids in solution will:
Select one:
a. have a net positive charge.
b. have no charged groups.
c. have no net charge.
d. have positive and negative charges in equal concentration.
e. have a net negative charge
a. have a net positive charge.
An octapeptide composed of four repeating glycylalanyl units has:
Select one:
a. a single free amino group on an alanyl residue.
b. two free amino and two free carboxyl groups.
c. a single free amino group on a glycyl residue and a single free carboxyl group on an alanyl residue
d. two free carboxyl groups, both on glycyl residues.
e. a single free amino group on an alanyl residue and a single free carboxyl group on a glycyl residue.
c. a single free amino group on a glycyl residue and a single free carboxyl group on an alanyl residue
At the isoelectric pH of a tetrapeptide:
Select one:
a. there are four ionic charges
b. the amino and carboxyl termini are not charged.
c. two internal amino acids of the tetrapeptide cannot have ionizable R groups.
d. the total net charge is zero.
e. only the amino and carboxyl termini contribute charge.
d. the total net charge is zero.
Which of the following describes the overall three-dimensional folding of a polypeptide?
Select one:
a. primary structure
b. secondary structure
c. tertiary structure
d. quaternary structure
e. none of the above
c. tertiary structure
By adding SDS (sodium dodecyl sulfate) during the electrophoresis of proteins, it is possible to:
Select one:
a. preserve a protein’s native structure and biological activity
b. separate proteins exclusively on the basis of molecular weight.
c. determine a protein’s isoelectric point.
d. determine the amino acid composition of the protein.
e. determine an enzyme’s specific activity.
b. separate proteins exclusively on the basis of molecular weight.
Specific enzyme activity:
Select one:
a. is the enzyme activity (expressed as units'') of a specific protein.
b. is the enzyme activity (enzyme as
units’’) in a milligram of protein.
c. is the enzyme activity (expressed as ``units’’) in a mol of protein.
d. refers to proteins other than enzymes.
e. refers only to purified proteins.
b. is the enzyme activity (enzyme as ``units’’) in a milligram of protein.
The backbone of two amino acid residues in a protein can be described as (where Ca is C-alpha):
Select one:
a. Ca–C–N–Ca–C–N
b. Ca–N–Ca–C–Ca–N–Ca–C
c. Ca–N–C–C–N–Ca–
d. C–N–Ca–Ca–C–N
e. Ca–Ca–C–N–Ca–Ca–C
a. Ca–C–N–Ca–C–N
Which of the following bond-pairs within a peptide backbone show free rotation around both bonds?
Select one:
a. C¬O and N–C
b. N–Ca and N–C
c. Ca–C and N–Ca
d. C¬O and N–C?
e. N–C and Ca–C
c. Ca–C and N–Ca
In the a helix the hydrogen bonds:
Select one:
a. occur only between some of the amino acids of the helix.
b. occur mainly between electronegative atoms of the R groups.
c. are perpendicular to the axis of the helix.
d. occur mainly between electronegative atoms of the backbone.
e. occur only near the amino and carboxyl termini of the helix.
d. occur mainly between electronegative atoms of the backbone.
In a helix, the R groups on the amino acid residues:
Select one:
a. stack within the interior of the helix.
b. generate the hydrogen bonds that form the helix.
c. are located outside of the helix spiral.
d. cause only right-handed helices to form.
e. alternate between the outside and the inside of the helix.
c. are located outside of the helix spiral.
A D-amino acid would interrupt an a helix made of L-amino acids. Another naturally occurring constraint on the formation of an a helix is the presence of:
Select one:
a. a negatively charged Arginine residue.
b. a positively charged Lysine residue.
c. two Glycine residues side by side.
d. a nonpolar residue near the carboxyl terminus. e. a Proline residue.
e. a Proline residue.
Thr and/or Leu residues tend to disrupt an a-helix when they occur next to each other in a protein because:
Select one:
a. of the possible covalent interactions between the Thr and/or Leu side chains.
b. both amino acids are highly hydrophobic.
c. the R group of neither amino acid can form a hydrogen bond.
d. of electrostatic repulsion between the Thr and/or Leu side chains.
e. of steric hindrance between the bulky Thr and/or Leu side chains.
e. of steric hindrance between the bulky Thr and/or Leu side chains.
Amino acid residues commonly found at the end of b turn are:
Select one:
a. Pro and Gly.
b. Ala and Gly.
c. two Cys.
d. hydrophobic.
e. those with ionized R groups.
b. Ala and Gly.
A sequence of amino acids in a certain protein is found to be -Ser-Gly-Pro- Gly-. The sequence is most probably part of:
Select one:
a. b turn.
b. parallel b sheet.
c. a helix.
d. a–sheet.
e. antiparallel b sheet.
a. b turn.
The three-dimensional conformation of a protein may be strongly influenced by amino acid residues that are very far apart in sequence. This relationship is in contrast to secondary structure, where the amino acid residues are:
Select one:
a. restricted to only about seven of the twenty standard amino acids found in proteins
b. always side by side.
c. generally on different polypeptide strands.
d. generally near the polypeptide chain’s amino terminus or carboxyl terminus.
e. generally near each other in sequence.
e. generally near each other in sequence.
Which of the following statements is false?
Select one:
a. a-keratin is a protein in which the polypeptides are mainly in the a-helix conformation
b. Silk fibroin is a protein in which the polypeptide is almost entirely in the b conformation.
c. Collagen is a protein in which the polypeptides are mainly in the a-helix conformation
d. Gly residues are particularly abundant in collagen.
e. Mutations in collagen have been shown to be responsible for some human diseases
c. Collagen is a protein in which the polypeptides are mainly in the a-helix conformation
To alter the shape of the a-keratin chains–as in hair waving– the a-keratin chains have undergone one chemical step resulting the conversion of disulfide bridges to Cysteine. What subsequent steps are required?
Select one:
a. chemical reduction and then chemical oxidation
b. chemical oxidation and then shape remodeling
c. shape remodeling and then chemical reduction
d. shape remodeling and then chemical oxidation
e. chemical reduction and then shape remodeling
d. shape remodeling and then chemical oxidation
Which of the following statements about oligomeric proteins is false?
Select one:
a. Some subunits may have nonprotein prosthetic groups.
b. All subunits must be identical.
c. Contain more than one N-terminals
d. Some oligomeric proteins can further associate into large fibres.
e. Many have regulatory roles.
b. All subunits must be identical.
Which of the following statements about proteins is false?
Select one:
a. Nonpolar amino acid side chains are mostly located on the surface of the water-soluble proteins.
b. Most of the globular proteins are compact.
c. Proteins are sometimes conjugated with carbohydrates or fats.
d. Many proteins have more than one polypeptide.
e. proteins consist of amino acids linked by peptide bonds.
a. Nonpolar amino acid side chains are mostly located on the surface of the water- soluble proteins.