Week 4 Vocabulary Flashcards
Phytanyl
The lipid comprising the archaeal lipid bilayer
Biphytanyl
One of the lipids comprising the archaeal lipid bilayer; formed from 2 phytanyl molecules
Crenarchaeol
One of the lipids comprising the archaeal lipid bilayer; contains cyclic, steroid-like functional groups
Pseudomurine
Archeal molecule equivalent to peptidoglycan
N-acetylasosaminuronic acid
One of the acidic sugars found in pseudomurine
Methanochondroitin
Extracellular glycan found specifically in the methanotropic archaea
Sheath
Extra protein layer (in addition to the S-layer) found in some archaea
Archalleum
Structure that is responsible for swimming motility in archaea
Hami
Peritritchous appendages comprised of spikes and hooks
Lag phase
Part of the growth curve where cells are actively synthesizing new components but not increasing in cell numbers
Exponential Phase
Part of the growth curve where cells are doubling consistently
Stationary Phase
Part of the growth curve where cell growth and cell death are balanced
Death Phase
Part of the cell cycle where cells are dying
Generation Time
Time it takes a population to double
Biofilm
Growth of organisms in a matrix consisting of polysaccharides, extracellular DNA, and proteins
Asexual Reproduction
New cells from one set of chromosomes yield daughter cells that are genetic clones of the parent cell
Binary Fission
The mechanism that most bacteria use to divide
Their components replicate then they divide in the middle
Budding
Asymmetrical growth of cell on one side
Fragmentation
Production of new organisms from a parent breaking in two
Sexual Reproduction
Combination of genetic material from two organisms yield new organism
Psuedosexual Reproduction
DNA that does not come from a parent cell
Conjugation
Transfer of DNA from one cell to another via a pilus
Transformation
Taking up DNA from the environment
Transduction
Introduction of new DNA via a virus
Septum
During cell division, the part of new peptidoglycan that divides the cell in two
Cytokinesis
Replication of cellular components followed by cell division
N-acetylglucosamine
Non-acidic amino sugar found in peptidoglycan
N-acetylmuramic acid
Acidic amino sugar found in peptidoglycan
Translocation
Transfer of bactoprenyl-linked peptidoglycan across the plasma membrane
Transglycosylation
Addition of peptidoglycan subunits to the periplasmic peptidoglycan molecule
Transpeptidation
Cross linking of amino acid chains in peptidoglycan
Bactoprenyl Phosphate
Carrier molecule for peptidoglycan synthesis and transport
Pyrophosphate
Two phosphates
Macronutrient
Nutrient required in large quantities
Micronutrient
Nutrient required in small quantities
Vitamin
On organic molecule that is an essential micronutrient
Siderophore
Molecule bacteria need to obtain iron
Niacin
B vitamin necessary to make NAD+
Riboflavin
Vitamin needed to make FMN and FAD
Pantothenic Acid
Vitamin needed to make coenzyme A
Psychrophile
Bacteria with growth temperature optimum of about 5 degrees Celsius
Mesophile
Bacteria with growth temperature optimum of about 37 degrees Celsius
Thermophile
Bacteria with growth temperature optimum of about 60 degrees Celsius
Hyperthermophile
Bacteria with growth temperature optimum of over 80 degrees Celsius
Osmolarity
Total concentration of solute
Tonicity
Total concentration of permeable solute
Osmotolerant
Organism that grows well in high concentrations of solute
Halotolerant
Organism that grows okay in higher concentrations of salt
Halophile
Organisms that need high salt concentrations to grow
Glycine Betaine
Molecules used by halophiles to equalize solute concentration inside the cell
Neutrophile
Organisms that grow at neutral pH
Acidophile
Organisms that grow at a low pH
Alkaliphile
Organisms that grow at a high pH
Obligate Aerobe
Organisms that require oxygen to grow
Facultative Aerobe
Organisms that grow better in the presence of oxygen
Microaerophile
Organisms that grow in concentrations of oxygen just under 1 atm
Aerotolerant
Organisms that are unaffected by oxygen concentration
Obligate Anaerobe
Organisms that are killed by oxygen
Superoxide
O2-
Catalase
Enzyme that breaks H2O2 into O2
Superoxide Dismutase
Enzyme that detoxifies superoxides
Barotolerant
Organisms that grow okay in increased pressure
Barophilic
Organisms that require increased pressure to grow
Optical density
he degree to which a refractive medium hinders transmitted rays of light.
Defined Medium
a relatively simple medium that is made up of specific chemicals at known concentrations
Complex Medium
A media where the exact chemical composition of the media is not known
Selective Medium
Selective media selects for the growth of some organisms by promoting their growth and/or inhibiting the growth of other organisms
Differential Medium
Differentiates between organisms growing on one plate