WATER MICROBIOLOGY AND FERMENTATION Flashcards

1
Q

Essential to all organisms

A

water

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2
Q

WATER-BORNE DISEASES
Bacterial

A

● Leptospirosis (Leptospira)
● Typhoid (S. enterica serotype typhi)
● Paratyphoid (S. enterica serotype paratyphi)
● Cholera (Vibrio cholerae)
● Bacillary Dysentery (E. coli, Shigella, Campylobacter, Salmonella)

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3
Q

WATER-BORNE DISEASES
Viral

A

● Viral Hepatitis (Hepatitis virus A and E)
● Poliomyelitis (poliovirus)
● Infant diarrhea (Rotavirus)
● Gastroenteritis and Traveler’s Diarrhea due to Norovirus

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4
Q

WATER-BORNE DISEASES
Protozoal and Parasitic

A

● Amoebiasis (Entamoeba histolytica)
● Giardiasis (Giardia lamblia)
● Schistosomiasis (Schistosoma)
● Roundworms, Whipworms (helminths)

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5
Q

microorganisms whose presence also indicates the probable presence of pathogenic microorganisms.

A

Indicator organisms

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6
Q

Example of indicator organisms (particularly used in water microbiology assessments) are

A

coliforms

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7
Q

Indicator of fecal/sewage contamination in food or water, thus indicating possible presence pathogenic bacteria.

A

coliforms

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8
Q

coliform characteristics

A

Rod-shaped (bacilli)
facultative anaerobe
non-spore forming
lactose-fermenting
gram-negative bacteria

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9
Q

why do we use indicator organisms and not tets the pathogen directly?

A

Indicator organisms are used instead of directly testing for pathogens because it’s impractical to test for every pathogen in every water sample

the main pathogen is also very small in numbers

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10
Q

agar used in water quality tests to distinguish coliforms and fecal coliforms that signal possible pathogenic microorganism contamination in water samples

inihibts the growth of most gram-positive bacteria

differentiates bacteria that ferment lactose

A

Eosin-Methylene Blue (EMB) Agar

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11
Q

● Based on statistical estimation using Most Probable Number of MPN
● MPN estimates the concentration of viable mcgs in a sample
● Sub-samples are inoculated in a series of tubes

A

Multiple Tube Fermentation Technique
(MTFT)

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12
Q

Multiple Tube Fermentation Technique
(MTFT) Typically composed of 3 stages

A

presumptive, confirmed, and
completed

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13
Q

Multiple Tube Fermentation Technique
(MTFT)

A

Stage 1: Presumptive test in Lactose Broth with Durham tube
After incubation: Check for yellowing/gas production in the tubes is (+) for presumptive test

Stage 2: Confirmed Test using EMBA
After incubation: Check for dark colored colonies or green metallic sheen colonies is (+) for confirmed test

Stage 3: Completed Test via IMViC and Microscopy
After Gram Stain: Look for gram negative, non-spore forming rods is positive for Completed Test
After IMViC: Indole (+), Methyl Red (+), Voges Proskauer (-), Citrate (-) is positive for E. coli

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14
Q

Test if tryptophan is converted to indole

A

Indole Test

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15
Q

Indole Test
Indicator
mechanism
positive, negative result

A

(+) Red ring is observed when Kovac’s reagent is reacts with indole.

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16
Q

Detects lower pH due to fermentation of glucose

A

Methyl Red

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17
Q

Methyl Red
Indicator
mechanism
positive, negative result

A

Methyl red indicator
Yellow to red if acidic products are produced.

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18
Q

● Test if mcg uses citrate

A

Citrate Utilization Test

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19
Q

Citrate Utilization Test
Indicator
mechanism
positive, negative result

A

● Citrate permease
● If mcg uses citrate NH4 salts are converted to NH3 which rises the pH
● Bromothymol blue (green to blue)

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20
Q

● To check acetoin production from glucose fermentation

A

Voges Proskauer

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21
Q

Voges Proskauer
Indicator
mechanism
positive, negative result

A

● In the presence of oxygen, alkali and naphthol, acetoin is converted to diacetyl w/c condenses with guanidine from peptone w/c produces a pinkish polymer

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22
Q

IMViC test stands for

A

Indole Test
Methyl Red
Voges Proskauer
Citrate Utilization Test

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23
Q

a statistical method used to estimate the viable numbers of bacteria in a sample by inoculating broth in 10-fold dilutions

MTFT results are interpreted using this Table

A

Most Probable Number (MPN) Table

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24
Q

● Determine microbial load of sample by calculating colony forming units per unit of the sample (cfu/g or cfu/ml)
● Done using Plate Count Agar (PCA)
● Good quality water should have <100 cfu/mL
● HPC indicates efficiency of water treatment (chlorination, filtration, sedimentation etc.)

A

HETEROTROPHIC PLATE COUNT

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25
Series of sequential dilution used to reduce dense cultures to obtain usable (countable) concentration This is performed in conjunction with plating e.g., spread or pour plating to estimate the microbial load in a sample
Serial Dilution
26
calculate colony forming units per unit of sample:
Cfu/ml = (no. of colonies*/amount inoculum plated) x dilution factor if done in duplicates, use average no. of colonies
27
colonies are the usable counts
30-300
28
<30 colonies
TFTC
29
>300 colonies
TNTC
30
Inoculum plated spread plate
0.1 mL
31
Inoculum plated pour plate
1.0 mL
32
count the number of colonies of microorganisms that have grown on an agar plate prepared from a sample
quebec colony counter
33
Metabolic pathway of oxidation-reduction to produce energy. Performed by heterotrophic organisms anaerobically (in absence of oxygen). In this process, there is no net oxidation of the fuel.
FERMENTATION
34
FERMENTATION Common fuel
sugars, fatty acids, amino acids, purines and pyrimidines.
35
types of fermentation
Lactic Acid or Homolactic Fermentation Ethanol or Alcohol Fermentation
36
one molecule of glucose is ultimately converted to two molecules of lactic acid.
Lactic Acid or Homolactic Fermentation
37
one molecule of glucose yields carbon dioxide and ethanol in addition to lactic acid
Heterolactic fermentation
38
WINE MAKING Preparation of Fruit Mash
1.0 kg fruit Osterize and liquify in a blender in 250 ml of water Fill the fruit mash with water up to 2 Liters in a large beaker Add 500 g sugar and stir to dissolve Test pH and adjust it to 4.0-4.7. For highly acidic mash, adjust using CaCO3 Heat at 65 °C for 30 minutes (pasteurize). Cool and transfer to a demijohn gallon
39
WINE MAKING Fermentation Proper
Add a teaspoon yeast (Saccharomyces cerevisiae) Set-up the demijohn and the limewater trap accordingly Ferment for 1 week and or until no bubbles are seen in the limewater trap
40
WINE MAKING Wine Harvesting
After fermentation, filter the mash through a cheesecloth Add one beaten egg in the filtrate Pasteurize at 65 °C for 30 minutes the mixture then decant in sterile bottles.
41
are large vessels for fermenting wine, cider and mead. They are often made from thick glass
demijohn gallon
42
optimum ph for wine mash
4.0-4.7
43
trap for wine demijohn, to determine whether carbon dioxide was produced. When this reacts with CO2 it becomes milky.
Limewater Trap Ca (OH)2
44
is a sour milk product attributed to the presence of lactic acid produced by bacteria that underwent fermentation
Yoghurt
45
Commonly used bacteria in yogurt production:
● Streptococcus thermophilus ● Lactobacillus bulgaricus
46
YOGURT MAKING
Put the 1L of Fresh milk in large beaker Add Skim milk powder then stir Heat the mixture in a water bath at 90 °C for 10 minutes Chill the mixture in an ice bath Add the starter culture Incubate at 43-46 °C for at least 4 hours or until clotting is observed.
47
brings the acidity to the desired level.
Tartaric, citric or malic acid
48
neutralize excess acidity
Potassium tartrate or calcium carbonate
49
enzymes that clears the wine
Tarnin and pectolytic
50
produces fizz or effervescence (from secondary fermentation)
Invert or cane sugar
51
arrests the fermentation in the making of appetizer and dessert wines.
Brandy
52
wines that contains low sugar
Dry table wines
53
Are found in table and sparkling wines
EtOH (18.5%)
54
found at 10-175 mg/100mL of wines.
Higher alcohols e.g., isoamyl and butyl-OH
55
Acids such as ________ are also produced but in excess this can lead to spoilage of wine.
formic, acetic and propionic
56
Table wines typically contain 0.5 to 1.0%
titratable acidity
57
most desirable level of titratable acidity
0.65%
58
Volatile fatty acids (VFAs) are produced through heterolactic fermentation
true
59
Volatile fatty acids (VFAs)
acetic, propionic, and butyric acids
60
Enzyme and reagent in indole test
tryptophanase enzyme Kovac reagent